RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 DAND5Q8N907 189 aa8.61□□□□□ -1.03
VMP1-203ENST00000586245 FAM168BA1KXE4 195 aa8.6□□□□□ -1.03
VMP1-203ENST00000586245 TMEM238C9JI98 176 aa8.6□□□□□ -1.03
VMP1-203ENST00000586245 MIEN1Q9BRT3 115 aa8.6□□□□□ -1.03
VMP1-203ENST00000586245 RPL24P83731 157 aaKnown RBP8.59□□□□□ -1.03
VMP1-203ENST00000586245 ADAMTSL4-AS1Q5T5F5 129 aa8.59□□□□□ -1.03
VMP1-203ENST00000586245 BOD1L2Q8IYS8 172 aa8.59□□□□□ -1.03
VMP1-203ENST00000586245 C14orf144Q96I85 54 aa8.59□□□□□ -1.03
VMP1-203ENST00000586245 PLA2G2DQ9UNK4 145 aa8.59□□□□□ -1.03
VMP1-203ENST00000586245 RYR1P21817 5038 aa8.58□□□□□ -1.04
VMP1-203ENST00000586245 M0QXV9 152 aa8.58□□□□□ -1.04
VMP1-203ENST00000586245 DLEU1O43261 78 aa8.58□□□□□ -1.04
VMP1-203ENST00000586245 SERTAD4-AS1Q5TG53 156 aa8.58□□□□□ -1.04
VMP1-203ENST00000586245 LITAFQ99732 161 aa8.58□□□□□ -1.04
VMP1-203ENST00000586245 HSPG2P98160 4391 aa8.58□□□□□ -1.04
VMP1-203ENST00000586245 EPM2AB3EWF7 344 aa8.57□□□□□ -1.04
VMP1-203ENST00000586245 NPC2P61916 151 aa8.57□□□□□ -1.04
VMP1-203ENST00000586245 SLC25A34Q6PIV7 304 aa8.57□□□□□ -1.04
VMP1-203ENST00000586245 NKAPP1Q8N9T2 125 aa8.57□□□□□ -1.04
VMP1-203ENST00000586245 SPANXDQ9BXN6 97 aa8.57□□□□□ -1.04
VMP1-203ENST00000586245 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
VMP1-203ENST00000586245 LOC107984156A0A0G2JMH3 177 aa8.56□□□□□ -1.04
VMP1-203ENST00000586245 SMR3BP02814 79 aaPredicted RBP8.56□□□□□ -1.04
VMP1-203ENST00000586245 Q6ZVH6 145 aa8.56□□□□□ -1.04
VMP1-203ENST00000586245 ARL17AQ8IVW1 177 aa8.56□□□□□ -1.04
VMP1-203ENST00000586245 C7orf33Q8WU49 177 aa8.56□□□□□ -1.04
VMP1-203ENST00000586245 COPS9Q8WXC6 57 aa8.56□□□□□ -1.04
VMP1-203ENST00000586245 C22orf24Q9Y442 160 aa8.56□□□□□ -1.04
VMP1-203ENST00000586245 KIAA1109Q2LD37 5005 aa8.56□□□□□ -1.04
VMP1-203ENST00000586245 IGLV5-37A0A075B6J1 123 aa8.55□□□□□ -1.04
VMP1-203ENST00000586245 VPREB1P12018 145 aa8.55□□□□□ -1.04
VMP1-203ENST00000586245 LBHQ53QV2 105 aaPredicted RBP8.55□□□□□ -1.04
VMP1-203ENST00000586245 PHF5AQ7RTV0 110 aaKnown RBP8.55□□□□□ -1.04
VMP1-203ENST00000586245 KRTAP7-1Q8IUC3 87 aa8.55□□□□□ -1.04
VMP1-203ENST00000586245 LINC00308Q8TCZ7 52 aa8.55□□□□□ -1.04
VMP1-203ENST00000586245 TP73-AS1Q9UF72 201 aa8.55□□□□□ -1.04
VMP1-203ENST00000586245 IFITM1P13164 125 aa8.54□□□□□ -1.04
VMP1-203ENST00000586245 SRSF9Q13242 221 aaKnown RBP eCLIP8.54□□□□□ -1.04
VMP1-203ENST00000586245 UBE2BP63146 152 aa8.53□□□□□ -1.04
VMP1-203ENST00000586245 SOSTDC1Q6X4U4 206 aa8.53□□□□□ -1.04
VMP1-203ENST00000586245 MRPL55Q7Z7F7 128 aaKnown RBP8.53□□□□□ -1.04
VMP1-203ENST00000586245 LINC00528Q8N1L1 170 aa8.53□□□□□ -1.04
VMP1-203ENST00000586245 SPANXB1Q9NS25 103 aaPredicted RBP8.53□□□□□ -1.04
VMP1-203ENST00000586245 TSTD3H0UI37 97 aa8.52□□□□□ -1.05
VMP1-203ENST00000586245 FAM229AH3BQW9 127 aa8.52□□□□□ -1.05
VMP1-203ENST00000586245 Q8NDZ9 215 aa8.52□□□□□ -1.05
VMP1-203ENST00000586245 GAGE10A6NGK3 116 aa8.51□□□□□ -1.05
VMP1-203ENST00000586245 M0R378 163 aa8.51□□□□□ -1.05
VMP1-203ENST00000586245 NDUFC2O95298 119 aa8.51□□□□□ -1.05
VMP1-203ENST00000586245 MUSTN1Q8IVN3 82 aa8.51□□□□□ -1.05
VMP1-203ENST00000586245 HIST1H4GQ99525 98 aa8.51□□□□□ -1.05
VMP1-203ENST00000586245 NCR3O14931 201 aa8.5□□□□□ -1.05
VMP1-203ENST00000586245 EIF4EBP3O60516 100 aaPredicted RBP8.5□□□□□ -1.05
VMP1-203ENST00000586245 LINC00167Q96N53 147 aa8.5□□□□□ -1.05
VMP1-203ENST00000586245 PPDPFQ9H3Y8 114 aa8.5□□□□□ -1.05
VMP1-203ENST00000586245 HIGD1BQ9P298 99 aa8.5□□□□□ -1.05
VMP1-203ENST00000586245 UQCR10Q9UDW1 63 aa8.5□□□□□ -1.05
VMP1-203ENST00000586245 RPL37AP61513 92 aaKnown RBP8.49□□□□□ -1.05
VMP1-203ENST00000586245 PRR3P79522 188 aaKnown RBP8.49□□□□□ -1.05
VMP1-203ENST00000586245 Q8N1X5 172 aa8.49□□□□□ -1.05
VMP1-203ENST00000586245 TRBV10-2A0A0K0K1G8 114 aa8.48□□□□□ -1.05
VMP1-203ENST00000586245 PLA2G1BP04054 148 aaKnown RBP8.48□□□□□ -1.05
VMP1-203ENST00000586245 C2orf91Q6ZV80 131 aa8.48□□□□□ -1.05
VMP1-203ENST00000586245 FAT1Q14517 4588 aa8.48□□□□□ -1.05
VMP1-203ENST00000586245 RPL37AP8A6NKH3 93 aa8.47□□□□□ -1.05
VMP1-203ENST00000586245 IGKV2-28A0A075B6P5 120 aa8.46□□□□□ -1.06
VMP1-203ENST00000586245 IGKV2D-28P01615 120 aa8.46□□□□□ -1.06
VMP1-203ENST00000586245 S100A7L2Q5SY68 101 aa8.46□□□□□ -1.06
VMP1-203ENST00000586245 Q5VSD8 79 aa8.46□□□□□ -1.06
VMP1-203ENST00000586245 PRO1933Q9H354 126 aa8.46□□□□□ -1.06
VMP1-203ENST00000586245 VPS13BQ7Z7G8 4022 aa8.45□□□□□ -1.06
VMP1-203ENST00000586245 IGLV1-50A0A075B6I6 118 aa8.45□□□□□ -1.06
VMP1-203ENST00000586245 TAL2Q16559 108 aa8.45□□□□□ -1.06
VMP1-203ENST00000586245 PSORS1C2Q9UIG4 136 aa8.45□□□□□ -1.06
VMP1-203ENST00000586245 HERC2O95714 4834 aa8.44□□□□□ -1.06
VMP1-203ENST00000586245 PCP4L1A6NKN8 68 aa8.44□□□□□ -1.06
VMP1-203ENST00000586245 DDTP30046 118 aa8.44□□□□□ -1.06
VMP1-203ENST00000586245 HNRNPA3P51991 378 aaKnown RBP8.44□□□□□ -1.06
VMP1-203ENST00000586245 C1orf137Q5JT78 98 aa8.44□□□□□ -1.06
VMP1-203ENST00000586245 KRTAP11-1Q8IUC1 163 aa8.44□□□□□ -1.06
VMP1-203ENST00000586245 OR13C6PQ8NH95 151 aa8.44□□□□□ -1.06
VMP1-203ENST00000586245 TRBV10-3A0A0K0K1G6 114 aa8.43□□□□□ -1.06
VMP1-203ENST00000586245 A4D1N5 150 aa8.42□□□□□ -1.06
VMP1-203ENST00000586245 HSD52Q0P140 79 aa8.42□□□□□ -1.06
VMP1-203ENST00000586245 CBY1Q9Y3M2 126 aa8.42□□□□□ -1.06
VMP1-203ENST00000586245 IGLV6-57P01721 117 aa8.41□□□□□ -1.06
VMP1-203ENST00000586245 REG3GQ6UW15 175 aa8.41□□□□□ -1.06
VMP1-203ENST00000586245 CEND1Q8N111 149 aa8.41□□□□□ -1.06
VMP1-203ENST00000586245 TMEM126AQ9H061 195 aa8.41□□□□□ -1.06
VMP1-203ENST00000586245 TRAV13-2A0A0B4J235 113 aa8.4□□□□□ -1.06
VMP1-203ENST00000586245 A6NDN8 102 aa8.4□□□□□ -1.06
VMP1-203ENST00000586245 PRYO14603 147 aa8.4□□□□□ -1.06
VMP1-203ENST00000586245 LINC00337Q8N6G1 96 aa8.4□□□□□ -1.06
VMP1-203ENST00000586245 KRTAP17-1Q9BYP8 105 aa8.4□□□□□ -1.06
VMP1-203ENST00000586245 KCNQ1DNQ9H478 68 aa8.4□□□□□ -1.06
VMP1-203ENST00000586245 TMEM238LA0A1B0GVL6 79 aa8.39□□□□□ -1.07
VMP1-203ENST00000586245 A6NJY4 79 aa8.39□□□□□ -1.07
VMP1-203ENST00000586245 BCE1O60756 84 aa8.39□□□□□ -1.07
VMP1-203ENST00000586245 TRAV23DV6A0A075B6W5 121 aa8.38□□□□□ -1.07
VMP1-203ENST00000586245 IGLV7-43P04211 117 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms