RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 HIST1H2BJP06899 126 aa6.3□□□□□ -1.4
SMARCA4-209ENST00000586122 VPREB1P12018 145 aa6.3□□□□□ -1.4
SMARCA4-209ENST00000586122 HIST1H2BOP23527 126 aa6.3□□□□□ -1.4
SMARCA4-209ENST00000586122 HIST1H2BBP33778 126 aa6.3□□□□□ -1.4
SMARCA4-209ENST00000586122 HIST1H2BDP58876 126 aa6.3□□□□□ -1.4
SMARCA4-209ENST00000586122 HIST1H2BCP62807 126 aa6.3□□□□□ -1.4
SMARCA4-209ENST00000586122 HIST2H2BEQ16778 126 aa6.3□□□□□ -1.4
SMARCA4-209ENST00000586122 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.3□□□□□ -1.4
SMARCA4-209ENST00000586122 HIST1H2BHQ93079 126 aa6.3□□□□□ -1.4
SMARCA4-209ENST00000586122 HIST1H2BNQ99877 126 aa6.3□□□□□ -1.4
SMARCA4-209ENST00000586122 HIST1H2BMQ99879 126 aa6.3□□□□□ -1.4
SMARCA4-209ENST00000586122 NDUFA12Q9UI09 145 aa6.3□□□□□ -1.4
SMARCA4-209ENST00000586122 RPL37AP8A6NKH3 93 aa6.29□□□□□ -1.4
SMARCA4-209ENST00000586122 LEPROTO15243 131 aa6.29□□□□□ -1.4
SMARCA4-209ENST00000586122 IGKCP01834 107 aa6.29□□□□□ -1.4
SMARCA4-209ENST00000586122 RPL13AP40429 203 aaKnown RBP6.29□□□□□ -1.4
SMARCA4-209ENST00000586122 NMUP48645 174 aa6.29□□□□□ -1.4
SMARCA4-209ENST00000586122 MEIG1Q5JSS6 88 aa6.29□□□□□ -1.4
SMARCA4-209ENST00000586122 GAGE10A6NGK3 116 aa6.28□□□□□ -1.4
SMARCA4-209ENST00000586122 SCO1O75880 301 aa6.28□□□□□ -1.4
SMARCA4-209ENST00000586122 TNXBP22105 4242 aa6.27□□□□□ -1.41
SMARCA4-209ENST00000586122 KRTAP1-4P0C5Y4 121 aa6.27□□□□□ -1.41
SMARCA4-209ENST00000586122 IGKV2D-26A0A0A0MRZ7 120 aa6.26□□□□□ -1.41
SMARCA4-209ENST00000586122 SYS1-DBNDD2H3BUS1 97 aa6.26□□□□□ -1.41
SMARCA4-209ENST00000586122 J3QQQ9 107 aa6.26□□□□□ -1.41
SMARCA4-209ENST00000586122 SMIM13P0DJ93 91 aa6.26□□□□□ -1.41
SMARCA4-209ENST00000586122 LGALS3P17931 250 aaKnown RBP6.26□□□□□ -1.41
SMARCA4-209ENST00000586122 UBE2AP49459 152 aa6.26□□□□□ -1.41
SMARCA4-209ENST00000586122 COA6Q5JTJ3 125 aaKnown RBP6.26□□□□□ -1.41
SMARCA4-209ENST00000586122 MIR7-3HGQ8N6C7 128 aa6.26□□□□□ -1.41
SMARCA4-209ENST00000586122 HMCN2Q8NDA2 5059 aa6.26□□□□□ -1.41
SMARCA4-209ENST00000586122 IGKV2-28A0A075B6P5 120 aa6.25□□□□□ -1.41
SMARCA4-209ENST00000586122 M0R378 163 aa6.25□□□□□ -1.41
SMARCA4-209ENST00000586122 IGKV2D-28P01615 120 aa6.25□□□□□ -1.41
SMARCA4-209ENST00000586122 PET117Q6UWS5 81 aa6.25□□□□□ -1.41
SMARCA4-209ENST00000586122 KRTAP13-1Q8IUC0 172 aa6.25□□□□□ -1.41
SMARCA4-209ENST00000586122 PRR26Q8N8Z3 221 aa6.25□□□□□ -1.41
SMARCA4-209ENST00000586122 A0A0U1RRA0 63 aa6.24□□□□□ -1.41
SMARCA4-209ENST00000586122 E9PLD3 99 aa6.24□□□□□ -1.41
SMARCA4-209ENST00000586122 TSPEAR-AS2P59090 65 aa6.24□□□□□ -1.41
SMARCA4-209ENST00000586122 BOD1L2Q8IYS8 172 aa6.24□□□□□ -1.41
SMARCA4-209ENST00000586122 PMCHL2Q9BQD1 86 aa6.24□□□□□ -1.41
SMARCA4-209ENST00000586122 TMEM126AQ9H061 195 aa6.24□□□□□ -1.41
SMARCA4-209ENST00000586122 LOC107984156A0A0G2JMH3 177 aa6.23□□□□□ -1.41
SMARCA4-209ENST00000586122 S100A1P23297 94 aa6.23□□□□□ -1.41
SMARCA4-209ENST00000586122 S100A12P80511 92 aa6.23□□□□□ -1.41
SMARCA4-209ENST00000586122 LINC01545Q5VT33 79 aa6.23□□□□□ -1.41
SMARCA4-209ENST00000586122 ARL17AQ8IVW1 177 aa6.23□□□□□ -1.41
SMARCA4-209ENST00000586122 PRYO14603 147 aa6.22□□□□□ -1.41
SMARCA4-209ENST00000586122 AKR1D1P51857 326 aa6.22□□□□□ -1.41
SMARCA4-209ENST00000586122 FAM19A1Q7Z5A9 133 aa6.22□□□□□ -1.41
SMARCA4-209ENST00000586122 Q8NDZ9 215 aa6.22□□□□□ -1.41
SMARCA4-209ENST00000586122 MIEN1Q9BRT3 115 aa6.22□□□□□ -1.41
SMARCA4-209ENST00000586122 TRBV10-2A0A0K0K1G8 114 aa6.21□□□□□ -1.42
SMARCA4-209ENST00000586122 CRYGAP11844 174 aa6.21□□□□□ -1.42
SMARCA4-209ENST00000586122 FAM229BQ4G0N7 80 aa6.21□□□□□ -1.42
SMARCA4-209ENST00000586122 C20orf202A1L168 122 aa6.2□□□□□ -1.42
SMARCA4-209ENST00000586122 TMEM238C9JI98 176 aa6.2□□□□□ -1.42
SMARCA4-209ENST00000586122 NDUFC2O95298 119 aa6.2□□□□□ -1.42
SMARCA4-209ENST00000586122 KCNQ1DNQ9H478 68 aa6.2□□□□□ -1.42
SMARCA4-209ENST00000586122 C3orf79P0CE67 100 aa6.19□□□□□ -1.42
SMARCA4-209ENST00000586122 PRLHP81277 87 aa6.19□□□□□ -1.42
SMARCA4-209ENST00000586122 LINC00337Q8N6G1 96 aa6.19□□□□□ -1.42
SMARCA4-209ENST00000586122 SPANXB1Q9NS25 103 aaPredicted RBP6.19□□□□□ -1.42
SMARCA4-209ENST00000586122 A0A0J9YXY3 114 aa6.18□□□□□ -1.42
SMARCA4-209ENST00000586122 NCR3O14931 201 aa6.18□□□□□ -1.42
SMARCA4-209ENST00000586122 TIMM17BO60830 172 aa6.18□□□□□ -1.42
SMARCA4-209ENST00000586122 SPRR1AP35321 89 aa6.18□□□□□ -1.42
SMARCA4-209ENST00000586122 CBY1Q9Y3M2 126 aa6.18□□□□□ -1.42
SMARCA4-209ENST00000586122 KRTDAPP60985 99 aa6.17□□□□□ -1.42
SMARCA4-209ENST00000586122 DAND5Q8N907 189 aa6.17□□□□□ -1.42
SMARCA4-209ENST00000586122 ZNF706Q9Y5V0 76 aaPredicted RBP6.17□□□□□ -1.42
SMARCA4-209ENST00000586122 A0A087X002 238 aa6.16□□□□□ -1.42
SMARCA4-209ENST00000586122 TRBV10-3A0A0K0K1G6 114 aa6.16□□□□□ -1.42
SMARCA4-209ENST00000586122 ETDCA0A1B0GVM5 59 aa6.16□□□□□ -1.42
SMARCA4-209ENST00000586122 TYMSOSQ8TAI1 123 aa6.16□□□□□ -1.42
SMARCA4-209ENST00000586122 HIGD2AQ9BW72 106 aa6.16□□□□□ -1.42
SMARCA4-209ENST00000586122 ZNF815PA8K554 130 aa6.15□□□□□ -1.42
SMARCA4-209ENST00000586122 DDTP30046 118 aa6.15□□□□□ -1.42
SMARCA4-209ENST00000586122 CTAG1AP78358 180 aa6.15□□□□□ -1.42
SMARCA4-209ENST00000586122 S100A7L2Q5SY68 101 aa6.15□□□□□ -1.42
SMARCA4-209ENST00000586122 KRTAP4-16G5E9R7 235 aaPredicted RBP6.14□□□□□ -1.43
SMARCA4-209ENST00000586122 SNRPEP62304 92 aaKnown RBP6.14□□□□□ -1.43
SMARCA4-209ENST00000586122 SPANXCQ9NY87 97 aa6.14□□□□□ -1.43
SMARCA4-209ENST00000586122 IGLV6-57P01721 117 aa6.13□□□□□ -1.43
SMARCA4-209ENST00000586122 ADAMTSL4-AS1Q5T5F5 129 aa6.13□□□□□ -1.43
SMARCA4-209ENST00000586122 COPS9Q8WXC6 57 aa6.13□□□□□ -1.43
SMARCA4-209ENST00000586122 LITAFQ99732 161 aa6.13□□□□□ -1.43
SMARCA4-209ENST00000586122 S100A2P29034 98 aa6.12□□□□□ -1.43
SMARCA4-209ENST00000586122 SOSTDC1Q6X4U4 206 aa6.12□□□□□ -1.43
SMARCA4-209ENST00000586122 LINC00308Q8TCZ7 52 aa6.12□□□□□ -1.43
SMARCA4-209ENST00000586122 SPRR4Q96PI1 79 aa6.12□□□□□ -1.43
SMARCA4-209ENST00000586122 PPDPFQ9H3Y8 114 aa6.12□□□□□ -1.43
SMARCA4-209ENST00000586122 TRAV23DV6A0A075B6W5 121 aa6.11□□□□□ -1.43
SMARCA4-209ENST00000586122 B5MCH6 92 aa6.11□□□□□ -1.43
SMARCA4-209ENST00000586122 S100A6P06703 90 aa6.11□□□□□ -1.43
SMARCA4-209ENST00000586122 JOSD1Q15040 202 aaPredicted RBP6.11□□□□□ -1.43
SMARCA4-209ENST00000586122 KRTAP13-2Q52LG2 175 aa6.11□□□□□ -1.43
SMARCA4-209ENST00000586122 SCGB1D4Q6XE38 83 aa6.11□□□□□ -1.43
SMARCA4-209ENST00000586122 Q6ZRX8 168 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms