RNA–Protein interactions for RNA: ENST00000585685.5

APOC4-APOC2-201, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

TSL 5

Gene APOC4-APOC2, Length 1,829 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-201ENST00000585685 ORMDL1Q9P0S3 153 aa11.05□□□□□ -0.64
APOC4-APOC2-201ENST00000585685 C6orf48Q9UBA6 75 aa11.05□□□□□ -0.64
APOC4-APOC2-201ENST00000585685 SDIM1Q6ZPB5 146 aa11.05□□□□□ -0.64
APOC4-APOC2-201ENST00000585685 C11orf45Q8TAV5 145 aa11.05□□□□□ -0.64
APOC4-APOC2-201ENST00000585685 DEFB131BA0A096LNP1 70 aa11.04□□□□□ -0.64
APOC4-APOC2-201ENST00000585685 STAB1Q9NY15 2570 aa11.03□□□□□ -0.64
APOC4-APOC2-201ENST00000585685 S100A7L2Q5SY68 101 aa11.03□□□□□ -0.64
APOC4-APOC2-201ENST00000585685 Q8N814 137 aa11.03□□□□□ -0.64
APOC4-APOC2-201ENST00000585685 FBN1P35555 2871 aaKnown RBP11.03□□□□□ -0.64
APOC4-APOC2-201ENST00000585685 LINC01556Q5JQF7 62 aa11.02□□□□□ -0.64
APOC4-APOC2-201ENST00000585685 C9orf129Q5T035 196 aaKnown RBP11.02□□□□□ -0.64
APOC4-APOC2-201ENST00000585685 SLPIP03973 132 aa11.02□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 TRBV7-7A0A0K0K1E9 115 aa11.01□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 C6orf99Q4VX62 202 aa11.01□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 ZNF561-AS1K7EIQ3 104 aa11□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 IGLV6-57P01721 117 aa11□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 SMCR5Q8TEV8 140 aa11□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 TENM3Q9P273 2699 aa11□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 PKD1L1Q8TDX9 2849 aa11□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 GAGE2AQ6NT46 116 aa10.99□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 LINC00643Q86TS7 51 aa10.99□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 C15orf56Q8N910 161 aa10.99□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 CAMK2N2Q96S95 79 aa10.99□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 KRTAP21-3Q3LHN1 58 aa10.98□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 C14orf132Q9NPU4 83 aa10.98□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 RPL18AQ02543 176 aaKnown RBP10.98□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 HIGD2BQ4VC39 106 aa10.98□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 C2orf48Q96LS8 159 aa10.98□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 TMEM256-PLSCR3K7ERE1 68 aa10.97□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 NDUFV3P56181 108 aaKnown RBP10.97□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 ANAPC13Q9BS18 74 aa10.97□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 C1orf43Q9BWL3 253 aa10.97□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 IMUPQ9GZP8 106 aa10.97□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 LINC00575Q6W349 94 aa10.96□□□□□ -0.65
APOC4-APOC2-201ENST00000585685 F8WDY8 70 aa10.95□□□□□ -0.66
APOC4-APOC2-201ENST00000585685 JMJD7-PLA2G4BH0Y9G9 81 aa10.95□□□□□ -0.66
APOC4-APOC2-201ENST00000585685 Q6ZRU5 148 aa10.95□□□□□ -0.66
APOC4-APOC2-201ENST00000585685 XAGE1AQ9HD64 81 aa10.95□□□□□ -0.66
APOC4-APOC2-201ENST00000585685 NHLRC4P0CG21 123 aaPredicted RBP10.94□□□□□ -0.66
APOC4-APOC2-201ENST00000585685 DNAH10OSP0CZ25 163 aa10.94□□□□□ -0.66
APOC4-APOC2-201ENST00000585685 TRAV10A0A0B4J240 114 aa10.93□□□□□ -0.66
APOC4-APOC2-201ENST00000585685 TM2D3Q9BRN9 247 aa10.93□□□□□ -0.66
APOC4-APOC2-201ENST00000585685 TRBV10-3A0A0K0K1G6 114 aa10.93□□□□□ -0.66
APOC4-APOC2-201ENST00000585685 IGKV2D-24A0A075B6R9 120 aa10.92□□□□□ -0.66
APOC4-APOC2-201ENST00000585685 hADV29S1A0JD25 119 aa10.92□□□□□ -0.66
APOC4-APOC2-201ENST00000585685 NDUFC2-KCTD14E9PQ53 114 aa10.92□□□□□ -0.66
APOC4-APOC2-201ENST00000585685 TRAV23DV6A0A075B6W5 121 aa10.91□□□□□ -0.66
APOC4-APOC2-201ENST00000585685 VPREB1P12018 145 aa10.91□□□□□ -0.66
APOC4-APOC2-201ENST00000585685 MDFIQ99750 246 aa10.91□□□□□ -0.66
APOC4-APOC2-201ENST00000585685 HUWE1Q7Z6Z7 4374 aaKnown RBP10.9□□□□□ -0.67
APOC4-APOC2-201ENST00000585685 CCKP06307 115 aa10.89□□□□□ -0.67
APOC4-APOC2-201ENST00000585685 DIRC1Q969H9 104 aa10.89□□□□□ -0.67
APOC4-APOC2-201ENST00000585685 K7EIL1 84 aa10.88□□□□□ -0.67
APOC4-APOC2-201ENST00000585685 LINC00846Q9NV44 126 aa10.88□□□□□ -0.67
APOC4-APOC2-201ENST00000585685 COL6A5A8TX70 2615 aa10.88□□□□□ -0.67
APOC4-APOC2-201ENST00000585685 M0R378 163 aa10.87□□□□□ -0.67
APOC4-APOC2-201ENST00000585685 ZNF73O43830 326 aaPredicted RBP10.87□□□□□ -0.67
APOC4-APOC2-201ENST00000585685 PRB2P02812 416 aaPredicted RBP10.87□□□□□ -0.67
APOC4-APOC2-201ENST00000585685 LINC00588Q9Y4M8 146 aa10.87□□□□□ -0.67
APOC4-APOC2-201ENST00000585685 TRBV7-6A0A0J9YX20 115 aa10.86□□□□□ -0.67
APOC4-APOC2-201ENST00000585685 SYCNQ0VAF6 134 aa10.86□□□□□ -0.67
APOC4-APOC2-201ENST00000585685 H3BQ85 93 aa10.86□□□□□ -0.67
APOC4-APOC2-201ENST00000585685 Q6ZRP5 223 aa10.86□□□□□ -0.67
APOC4-APOC2-201ENST00000585685 NOTCH1P46531 2555 aa10.85□□□□□ -0.67
APOC4-APOC2-201ENST00000585685 DNAH1Q9P2D7 4330 aa10.85□□□□□ -0.67
APOC4-APOC2-201ENST00000585685 ELOF1P60002 83 aaKnown RBP10.84□□□□□ -0.67
APOC4-APOC2-201ENST00000585685 COX7BP24311 80 aa10.83□□□□□ -0.68
APOC4-APOC2-201ENST00000585685 Q6JHZ5 121 aa10.83□□□□□ -0.68
APOC4-APOC2-201ENST00000585685 Q6ZQY7 126 aa10.83□□□□□ -0.68
APOC4-APOC2-201ENST00000585685 FAM236AA0A1B0GUQ0 79 aa10.82□□□□□ -0.68
APOC4-APOC2-201ENST00000585685 FAM236BA0A1B0GV22 79 aa10.82□□□□□ -0.68
APOC4-APOC2-201ENST00000585685 MRAPQ8TCY5 172 aa10.82□□□□□ -0.68
APOC4-APOC2-201ENST00000585685 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.81□□□□□ -0.68
APOC4-APOC2-201ENST00000585685 TLX1NBP0CAT3 122 aa10.81□□□□□ -0.68
APOC4-APOC2-201ENST00000585685 RBM3P98179 157 aaKnown RBP10.81□□□□□ -0.68
APOC4-APOC2-201ENST00000585685 UPK3BQ9BT76 320 aa10.8□□□□□ -0.68
APOC4-APOC2-201ENST00000585685 LOC110117498A0A087WWA1 95 aa10.79□□□□□ -0.68
APOC4-APOC2-201ENST00000585685 GHRHP01286 108 aa10.79□□□□□ -0.68
APOC4-APOC2-201ENST00000585685 Q6ZQT0 140 aa10.78□□□□□ -0.68
APOC4-APOC2-201ENST00000585685 RMI2Q96E14 147 aa10.78□□□□□ -0.68
APOC4-APOC2-201ENST00000585685 LAMTOR3Q9UHA4 124 aa10.78□□□□□ -0.68
APOC4-APOC2-201ENST00000585685 LINC00528Q8N1L1 170 aa10.77□□□□□ -0.68
APOC4-APOC2-201ENST00000585685 NBEAL1Q6ZS30 2694 aa10.77□□□□□ -0.69
APOC4-APOC2-201ENST00000585685 CCDC179H3BU77 68 aa10.77□□□□□ -0.69
APOC4-APOC2-201ENST00000585685 USP17L23D6RBM5 183 aa10.76□□□□□ -0.69
APOC4-APOC2-201ENST00000585685 PLA2G2DQ9UNK4 145 aa10.76□□□□□ -0.69
APOC4-APOC2-201ENST00000585685 HIST1H4AP62805 103 aaKnown RBP10.75□□□□□ -0.69
APOC4-APOC2-201ENST00000585685 IGKV3D-7A0A0C4DH55 119 aa10.74□□□□□ -0.69
APOC4-APOC2-201ENST00000585685 CASC10Q5T4H9 136 aa10.74□□□□□ -0.69
APOC4-APOC2-201ENST00000585685 PDE6GP18545 87 aa10.74□□□□□ -0.69
APOC4-APOC2-201ENST00000585685 SERTAD4-AS1Q5TG53 156 aa10.74□□□□□ -0.69
APOC4-APOC2-201ENST00000585685 KCNQ1DNQ9H478 68 aa10.74□□□□□ -0.69
APOC4-APOC2-201ENST00000585685 ATP5EP2Q5VTU8 51 aa10.73□□□□□ -0.69
APOC4-APOC2-201ENST00000585685 NKAPP1Q8N9T2 125 aa10.73□□□□□ -0.69
APOC4-APOC2-201ENST00000585685 DSCR8Q96T75 97 aa10.73□□□□□ -0.69
APOC4-APOC2-201ENST00000585685 C7orf33Q8WU49 177 aa10.72□□□□□ -0.69
APOC4-APOC2-201ENST00000585685 IGLV5-37A0A075B6J1 123 aa10.71□□□□□ -0.69
APOC4-APOC2-201ENST00000585685 B5MCH6 92 aa10.7□□□□□ -0.7
APOC4-APOC2-201ENST00000585685 UBL5Q9BZL1 73 aa10.7□□□□□ -0.7
APOC4-APOC2-201ENST00000585685 DNHD1Q96M86 4753 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms