RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 PLEKHB2Q96CS7 222 aa9.48□□□□□ -0.89
LSM12-202ENST00000585388 URB1-AS1Q96HZ7 61 aa9.48□□□□□ -0.89
LSM12-202ENST00000585388 CDIP1Q9H305 208 aa9.48□□□□□ -0.89
LSM12-202ENST00000585388 PMCHL1Q16048 86 aa9.47□□□□□ -0.89
LSM12-202ENST00000585388 C10orf91Q5T1B1 145 aa9.47□□□□□ -0.89
LSM12-202ENST00000585388 Q8NDZ9 215 aa9.47□□□□□ -0.89
LSM12-202ENST00000585388 TRAPPC1Q9Y5R8 145 aa9.47□□□□□ -0.89
LSM12-202ENST00000585388 IGLV7-46A0A075B6I9 117 aa9.46□□□□□ -0.9
LSM12-202ENST00000585388 HIGD2AQ9BW72 106 aa9.46□□□□□ -0.9
LSM12-202ENST00000585388 LINC00158P58513 81 aa9.45□□□□□ -0.9
LSM12-202ENST00000585388 FAT4Q6V0I7 4981 aa9.45□□□□□ -0.9
LSM12-202ENST00000585388 C3orf22Q8N5N4 141 aa9.44□□□□□ -0.9
LSM12-202ENST00000585388 CHTOPQ9Y3Y2 248 aaKnown RBP9.44□□□□□ -0.9
LSM12-202ENST00000585388 SPAG11AQ6PDA7 123 aa9.43□□□□□ -0.9
LSM12-202ENST00000585388 ZNF706Q9Y5V0 76 aaPredicted RBP9.43□□□□□ -0.9
LSM12-202ENST00000585388 SPRR4Q96PI1 79 aa9.42□□□□□ -0.9
LSM12-202ENST00000585388 MUC17Q685J3 4493 aa9.42□□□□□ -0.9
LSM12-202ENST00000585388 A0A0U1RRA0 63 aa9.4□□□□□ -0.9
LSM12-202ENST00000585388 TMEM223A0PJW6 202 aa9.4□□□□□ -0.9
LSM12-202ENST00000585388 PRYO14603 147 aa9.4□□□□□ -0.9
LSM12-202ENST00000585388 ATP6V1G1O75348 118 aa9.4□□□□□ -0.9
LSM12-202ENST00000585388 TRAV12-1A0A0B4J245 112 aa9.39□□□□□ -0.91
LSM12-202ENST00000585388 MEIG1Q5JSS6 88 aa9.39□□□□□ -0.91
LSM12-202ENST00000585388 LCE2AQ5TA79 106 aaPredicted RBP9.39□□□□□ -0.91
LSM12-202ENST00000585388 PPDPFQ9H3Y8 114 aa9.39□□□□□ -0.91
LSM12-202ENST00000585388 C4orf48Q5BLP8 95 aa9.38□□□□□ -0.91
LSM12-202ENST00000585388 BOD1L2Q8IYS8 172 aa9.38□□□□□ -0.91
LSM12-202ENST00000585388 SMIM13P0DJ93 91 aa9.37□□□□□ -0.91
LSM12-202ENST00000585388 HERV-K104P63124 156 aa9.37□□□□□ -0.91
LSM12-202ENST00000585388 FP248Q71RG6 208 aaPredicted RBP9.37□□□□□ -0.91
LSM12-202ENST00000585388 LINC00337Q8N6G1 96 aa9.37□□□□□ -0.91
LSM12-202ENST00000585388 IFI27L1Q96BM0 104 aa9.37□□□□□ -0.91
LSM12-202ENST00000585388 CHCHD1Q96BP2 118 aaKnown RBP9.37□□□□□ -0.91
LSM12-202ENST00000585388 KRTAP9-2Q9BYQ4 174 aa9.37□□□□□ -0.91
LSM12-202ENST00000585388 LINC00587B1AMM8 73 aa9.36□□□□□ -0.91
LSM12-202ENST00000585388 NCR3O14931 201 aa9.36□□□□□ -0.91
LSM12-202ENST00000585388 NDUFA5Q16718 116 aa9.36□□□□□ -0.91
LSM12-202ENST00000585388 MIR7-3HGQ8N6C7 128 aa9.36□□□□□ -0.91
LSM12-202ENST00000585388 ETDCA0A1B0GVM5 59 aa9.35□□□□□ -0.91
LSM12-202ENST00000585388 SNAPINO95295 136 aa9.35□□□□□ -0.91
LSM12-202ENST00000585388 APOC3P02656 99 aa9.35□□□□□ -0.91
LSM12-202ENST00000585388 SPRR1AP35321 89 aa9.35□□□□□ -0.91
LSM12-202ENST00000585388 S100A12P80511 92 aa9.34□□□□□ -0.91
LSM12-202ENST00000585388 SVBPQ8N300 66 aa9.34□□□□□ -0.91
LSM12-202ENST00000585388 MAP1LC3CQ9BXW4 147 aa9.34□□□□□ -0.91
LSM12-202ENST00000585388 KCNQ1DNQ9H478 68 aa9.34□□□□□ -0.91
LSM12-202ENST00000585388 Q8NBF4 154 aa9.33□□□□□ -0.92
LSM12-202ENST00000585388 NDUFA12Q9UI09 145 aa9.32□□□□□ -0.92
LSM12-202ENST00000585388 MYMXA0A1B0GTQ4 84 aa9.31□□□□□ -0.92
LSM12-202ENST00000585388 KRTAP4-16G5E9R7 235 aaPredicted RBP9.31□□□□□ -0.92
LSM12-202ENST00000585388 SPINK1P00995 79 aa9.31□□□□□ -0.92
LSM12-202ENST00000585388 DAND5Q8N907 189 aa9.31□□□□□ -0.92
LSM12-202ENST00000585388 SMCR5Q8TEV8 140 aa9.31□□□□□ -0.92
LSM12-202ENST00000585388 TRBV10-3A0A0K0K1G6 114 aa9.3□□□□□ -0.92
LSM12-202ENST00000585388 HSBP1O75506 76 aa9.3□□□□□ -0.92
LSM12-202ENST00000585388 LINC00483Q53H64 154 aa9.29□□□□□ -0.92
LSM12-202ENST00000585388 KRTAP13-3Q3SY46 172 aa9.27□□□□□ -0.93
LSM12-202ENST00000585388 YPEL4Q96NS1 127 aa9.27□□□□□ -0.93
LSM12-202ENST00000585388 TRBV10-2A0A0K0K1G8 114 aa9.26□□□□□ -0.93
LSM12-202ENST00000585388 H0Y8G0 127 aa9.26□□□□□ -0.93
LSM12-202ENST00000585388 FAM19A2Q8N3H0 131 aa9.26□□□□□ -0.93
LSM12-202ENST00000585388 LOC107984156A0A0G2JMH3 177 aa9.25□□□□□ -0.93
LSM12-202ENST00000585388 B5MCH6 92 aa9.25□□□□□ -0.93
LSM12-202ENST00000585388 DDTP30046 118 aa9.25□□□□□ -0.93
LSM12-202ENST00000585388 RPS29P62273 56 aaKnown RBP9.25□□□□□ -0.93
LSM12-202ENST00000585388 GAGE2AQ6NT46 116 aa9.25□□□□□ -0.93
LSM12-202ENST00000585388 ARL17AQ8IVW1 177 aa9.25□□□□□ -0.93
LSM12-202ENST00000585388 LEPROTO15243 131 aa9.24□□□□□ -0.93
LSM12-202ENST00000585388 PLNP26678 52 aa9.24□□□□□ -0.93
LSM12-202ENST00000585388 TSPEAR-AS2P59090 65 aa9.24□□□□□ -0.93
LSM12-202ENST00000585388 MOBPQ13875 183 aa9.24□□□□□ -0.93
LSM12-202ENST00000585388 MIEN1Q9BRT3 115 aa9.24□□□□□ -0.93
LSM12-202ENST00000585388 SPANXB1Q9NS25 103 aaPredicted RBP9.24□□□□□ -0.93
LSM12-202ENST00000585388 IGLV9-49A0A0B4J1Y8 123 aa9.23□□□□□ -0.93
LSM12-202ENST00000585388 ASB16-AS1Q495Z4 193 aa9.23□□□□□ -0.93
LSM12-202ENST00000585388 Q6ZRX8 168 aa9.23□□□□□ -0.93
LSM12-202ENST00000585388 LEPROTL1O95214 131 aa9.22□□□□□ -0.93
LSM12-202ENST00000585388 HERVK_113P61574 105 aa9.22□□□□□ -0.93
LSM12-202ENST00000585388 SSBP3-AS1Q7Z2R9 100 aa9.22□□□□□ -0.93
LSM12-202ENST00000585388 J3QQQ9 107 aa9.21□□□□□ -0.94
LSM12-202ENST00000585388 NMUP48645 174 aa9.21□□□□□ -0.94
LSM12-202ENST00000585388 ERC2-IT1O76042 136 aa9.2□□□□□ -0.94
LSM12-202ENST00000585388 SEC61BP60468 96 aaKnown RBP9.2□□□□□ -0.94
LSM12-202ENST00000585388 S100A7L2Q5SY68 101 aa9.2□□□□□ -0.94
LSM12-202ENST00000585388 Q8N377 158 aa9.2□□□□□ -0.94
LSM12-202ENST00000585388 Q9BRP9 147 aa9.2□□□□□ -0.94
LSM12-202ENST00000585388 SLC25A20O43772 301 aa9.19□□□□□ -0.94
LSM12-202ENST00000585388 NDUFC2O95298 119 aa9.19□□□□□ -0.94
LSM12-202ENST00000585388 JOSD1Q15040 202 aaPredicted RBP9.19□□□□□ -0.94
LSM12-202ENST00000585388 DPM2O94777 84 aa9.18□□□□□ -0.94
LSM12-202ENST00000585388 IGLV6-57P01721 117 aa9.18□□□□□ -0.94
LSM12-202ENST00000585388 LGALS3P17931 250 aaKnown RBP9.18□□□□□ -0.94
LSM12-202ENST00000585388 LCE2DQ5TA82 110 aaPredicted RBP9.18□□□□□ -0.94
LSM12-202ENST00000585388 HSPB8Q9UJY1 196 aa9.18□□□□□ -0.94
LSM12-202ENST00000585388 SERF1AO75920 110 aa9.17□□□□□ -0.94
LSM12-202ENST00000585388 TRAV23DV6A0A075B6W5 121 aa9.16□□□□□ -0.94
LSM12-202ENST00000585388 IGKCP01834 107 aa9.15□□□□□ -0.94
LSM12-202ENST00000585388 TRGC2P03986 189 aa9.15□□□□□ -0.94
LSM12-202ENST00000585388 LINC01547P58512 204 aaPredicted RBP9.15□□□□□ -0.94
LSM12-202ENST00000585388 LINC00310P59036 64 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms