RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 PANO1I0J062 215 aa5.87□□□□□ -1.47
UBBP4-201ENST00000583708 NDUFC2O95298 119 aa5.87□□□□□ -1.47
UBBP4-201ENST00000583708 PYY3Q5JQD4 70 aa5.87□□□□□ -1.47
UBBP4-201ENST00000583708 SPANXDQ9BXN6 97 aa5.87□□□□□ -1.47
UBBP4-201ENST00000583708 XAGE1AQ9HD64 81 aa5.87□□□□□ -1.47
UBBP4-201ENST00000583708 SPANXCQ9NY87 97 aa5.87□□□□□ -1.47
UBBP4-201ENST00000583708 CBY1Q9Y3M2 126 aa5.87□□□□□ -1.47
UBBP4-201ENST00000583708 TRBV10-2A0A0K0K1G8 114 aa5.86□□□□□ -1.47
UBBP4-201ENST00000583708 PLA2G1BP04054 148 aaKnown RBP5.86□□□□□ -1.47
UBBP4-201ENST00000583708 SPATA45Q537H7 98 aa5.86□□□□□ -1.47
UBBP4-201ENST00000583708 PCP2Q8IVA1 136 aa5.86□□□□□ -1.47
UBBP4-201ENST00000583708 NKAPP1Q8N9T2 125 aa5.86□□□□□ -1.47
UBBP4-201ENST00000583708 C22orf24Q9Y442 160 aa5.86□□□□□ -1.47
UBBP4-201ENST00000583708 SMIM6P0DI80 62 aa5.85□□□□□ -1.47
UBBP4-201ENST00000583708 SLC25A34Q6PIV7 304 aa5.85□□□□□ -1.47
UBBP4-201ENST00000583708 LINC00518Q8N0U6 118 aa5.85□□□□□ -1.47
UBBP4-201ENST00000583708 Q8N1X5 172 aa5.85□□□□□ -1.47
UBBP4-201ENST00000583708 LITAFQ99732 161 aa5.85□□□□□ -1.47
UBBP4-201ENST00000583708 SPANXB1Q9NS25 103 aaPredicted RBP5.85□□□□□ -1.47
UBBP4-201ENST00000583708 M0QXV9 152 aa5.84□□□□□ -1.47
UBBP4-201ENST00000583708 M0R378 163 aa5.84□□□□□ -1.47
UBBP4-201ENST00000583708 VPREB1P12018 145 aa5.84□□□□□ -1.47
UBBP4-201ENST00000583708 MRPL55Q7Z7F7 128 aaKnown RBP5.84□□□□□ -1.47
UBBP4-201ENST00000583708 HIGD1BQ9P298 99 aa5.84□□□□□ -1.47
UBBP4-201ENST00000583708 PAM16Q9Y3D7 125 aa5.84□□□□□ -1.47
UBBP4-201ENST00000583708 HSPG2P98160 4391 aa5.84□□□□□ -1.47
UBBP4-201ENST00000583708 A0A0U1RRA0 63 aa5.83□□□□□ -1.48
UBBP4-201ENST00000583708 ADAMTSL4-AS1Q5T5F5 129 aa5.83□□□□□ -1.48
UBBP4-201ENST00000583708 SERTAD4-AS1Q5TG53 156 aa5.83□□□□□ -1.48
UBBP4-201ENST00000583708 FAM19A5Q7Z5A7 132 aaPredicted RBP5.83□□□□□ -1.48
UBBP4-201ENST00000583708 LINC00528Q8N1L1 170 aa5.83□□□□□ -1.48
UBBP4-201ENST00000583708 LINC00308Q8TCZ7 52 aa5.83□□□□□ -1.48
UBBP4-201ENST00000583708 RYR1P21817 5038 aa5.83□□□□□ -1.48
UBBP4-201ENST00000583708 FAM168BA1KXE4 195 aa5.82□□□□□ -1.48
UBBP4-201ENST00000583708 SRSF9Q13242 221 aaKnown RBP eCLIP5.82□□□□□ -1.48
UBBP4-201ENST00000583708 TAL2Q16559 108 aa5.82□□□□□ -1.48
UBBP4-201ENST00000583708 KRTAP7-1Q8IUC3 87 aa5.82□□□□□ -1.48
UBBP4-201ENST00000583708 TTTY13Q9BZ97 58 aa5.82□□□□□ -1.48
UBBP4-201ENST00000583708 RPL37AP61513 92 aaKnown RBP5.81□□□□□ -1.48
UBBP4-201ENST00000583708 UBE2BP63146 152 aa5.81□□□□□ -1.48
UBBP4-201ENST00000583708 LINC00167Q96N53 147 aa5.81□□□□□ -1.48
UBBP4-201ENST00000583708 IGLV1-50A0A075B6I6 118 aa5.8□□□□□ -1.48
UBBP4-201ENST00000583708 LOC105371267A0A1B0GV96 52 aa5.8□□□□□ -1.48
UBBP4-201ENST00000583708 PHF5AQ7RTV0 110 aaKnown RBP5.8□□□□□ -1.48
UBBP4-201ENST00000583708 DAND5Q8N907 189 aa5.8□□□□□ -1.48
UBBP4-201ENST00000583708 C14orf144Q96I85 54 aa5.8□□□□□ -1.48
UBBP4-201ENST00000583708 UQCR10Q9UDW1 63 aa5.8□□□□□ -1.48
UBBP4-201ENST00000583708 KIAA1109Q2LD37 5005 aa5.8□□□□□ -1.48
UBBP4-201ENST00000583708 SMR3BP02814 79 aaPredicted RBP5.79□□□□□ -1.48
UBBP4-201ENST00000583708 HIST1H4GQ99525 98 aa5.79□□□□□ -1.48
UBBP4-201ENST00000583708 TMEM126AQ9H061 195 aa5.79□□□□□ -1.48
UBBP4-201ENST00000583708 VPS13BQ7Z7G8 4022 aa5.79□□□□□ -1.48
UBBP4-201ENST00000583708 TRAV13-2A0A0B4J235 113 aa5.78□□□□□ -1.48
UBBP4-201ENST00000583708 PRYO14603 147 aa5.78□□□□□ -1.48
UBBP4-201ENST00000583708 Q5VSD8 79 aa5.78□□□□□ -1.48
UBBP4-201ENST00000583708 SOSTDC1Q6X4U4 206 aa5.78□□□□□ -1.48
UBBP4-201ENST00000583708 MUSTN1Q8IVN3 82 aa5.78□□□□□ -1.48
UBBP4-201ENST00000583708 KCNQ1DNQ9H478 68 aa5.78□□□□□ -1.48
UBBP4-201ENST00000583708 PSORS1C2Q9UIG4 136 aa5.78□□□□□ -1.48
UBBP4-201ENST00000583708 IGLV6-57P01721 117 aa5.77□□□□□ -1.49
UBBP4-201ENST00000583708 PRR3P79522 188 aaKnown RBP5.77□□□□□ -1.49
UBBP4-201ENST00000583708 HAMPP81172 84 aa5.77□□□□□ -1.49
UBBP4-201ENST00000583708 S100A7L2Q5SY68 101 aa5.77□□□□□ -1.49
UBBP4-201ENST00000583708 FAT1Q14517 4588 aa5.76□□□□□ -1.49
UBBP4-201ENST00000583708 TMEM238LA0A1B0GVL6 79 aa5.76□□□□□ -1.49
UBBP4-201ENST00000583708 A6NJY4 79 aa5.76□□□□□ -1.49
UBBP4-201ENST00000583708 H0Y9J4 135 aa5.76□□□□□ -1.49
UBBP4-201ENST00000583708 BCE1O60756 84 aa5.76□□□□□ -1.49
UBBP4-201ENST00000583708 DDTP30046 118 aa5.76□□□□□ -1.49
UBBP4-201ENST00000583708 REG3GQ6UW15 175 aa5.76□□□□□ -1.49
UBBP4-201ENST00000583708 LINC00337Q8N6G1 96 aa5.76□□□□□ -1.49
UBBP4-201ENST00000583708 HERC2O95714 4834 aa5.76□□□□□ -1.49
UBBP4-201ENST00000583708 SRRM2Q9UQ35 2752 aaKnown RBP5.75□□□□□ -1.49
UBBP4-201ENST00000583708 IGLV7-43P04211 117 aa5.75□□□□□ -1.49
UBBP4-201ENST00000583708 RPL28P46779 137 aaKnown RBP5.75□□□□□ -1.49
UBBP4-201ENST00000583708 HINT1P49773 126 aaPredicted RBP5.75□□□□□ -1.49
UBBP4-201ENST00000583708 C1orf137Q5JT78 98 aa5.75□□□□□ -1.49
UBBP4-201ENST00000583708 SPINK6Q6UWN8 80 aa5.75□□□□□ -1.49
UBBP4-201ENST00000583708 C2orf91Q6ZV80 131 aa5.75□□□□□ -1.49
UBBP4-201ENST00000583708 Q8NDZ9 215 aa5.75□□□□□ -1.49
UBBP4-201ENST00000583708 TRBV7-6A0A0J9YX20 115 aa5.74□□□□□ -1.49
UBBP4-201ENST00000583708 TRBV10-3A0A0K0K1G6 114 aa5.74□□□□□ -1.49
UBBP4-201ENST00000583708 GAGE10A6NGK3 116 aa5.74□□□□□ -1.49
UBBP4-201ENST00000583708 RPL37AP8A6NKH3 93 aa5.74□□□□□ -1.49
UBBP4-201ENST00000583708 TSTD3H0UI37 97 aa5.74□□□□□ -1.49
UBBP4-201ENST00000583708 NCR3O14931 201 aa5.74□□□□□ -1.49
UBBP4-201ENST00000583708 EIF4EBP3O60516 100 aaPredicted RBP5.74□□□□□ -1.49
UBBP4-201ENST00000583708 SPRR1AP35321 89 aa5.74□□□□□ -1.49
UBBP4-201ENST00000583708 KRTAP10-4P60372 401 aaPredicted RBP5.74□□□□□ -1.49
UBBP4-201ENST00000583708 NPC2P61916 151 aa5.74□□□□□ -1.49
UBBP4-201ENST00000583708 HSD52Q0P140 79 aa5.74□□□□□ -1.49
UBBP4-201ENST00000583708 DIRC1Q969H9 104 aa5.74□□□□□ -1.49
UBBP4-201ENST00000583708 IGKV2-28A0A075B6P5 120 aa5.73□□□□□ -1.49
UBBP4-201ENST00000583708 A4D1N5 150 aa5.73□□□□□ -1.49
UBBP4-201ENST00000583708 ZNF861PO60384 105 aa5.73□□□□□ -1.49
UBBP4-201ENST00000583708 IGKV2D-28P01615 120 aa5.73□□□□□ -1.49
UBBP4-201ENST00000583708 CEND1Q8N111 149 aa5.73□□□□□ -1.49
UBBP4-201ENST00000583708 OR13C6PQ8NH95 151 aa5.73□□□□□ -1.49
UBBP4-201ENST00000583708 C12orf57Q99622 126 aa5.73□□□□□ -1.49
UBBP4-201ENST00000583708 TRAV23DV6A0A075B6W5 121 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms