RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 NDUFA12Q9UI09 145 aa15.29■□□□□ 0.04
TSEN54-209ENST00000583454 TSPEAR-AS2P59090 65 aa15.28■□□□□ 0.04
TSEN54-209ENST00000583454 HERV-K104P63124 156 aa15.28■□□□□ 0.04
TSEN54-209ENST00000583454 IGLV5-37A0A075B6J1 123 aa15.26■□□□□ 0.03
TSEN54-209ENST00000583454 MYMXA0A1B0GTQ4 84 aa15.26■□□□□ 0.03
TSEN54-209ENST00000583454 SRSF9Q13242 221 aaKnown RBP eCLIP15.26■□□□□ 0.03
TSEN54-209ENST00000583454 LBHQ53QV2 105 aaPredicted RBP15.26■□□□□ 0.03
TSEN54-209ENST00000583454 J3QQQ9 107 aa15.25■□□□□ 0.03
TSEN54-209ENST00000583454 LINC00158P58513 81 aa15.24■□□□□ 0.03
TSEN54-209ENST00000583454 UBE2BP63146 152 aa15.24■□□□□ 0.03
TSEN54-209ENST00000583454 C1orf137Q5JT78 98 aa15.24■□□□□ 0.03
TSEN54-209ENST00000583454 RNF213Q63HN8 5207 aa15.23■□□□□ 0.03
TSEN54-209ENST00000583454 KRTDAPP60985 99 aa15.23■□□□□ 0.03
TSEN54-209ENST00000583454 MRPL55Q7Z7F7 128 aaKnown RBP15.23■□□□□ 0.03
TSEN54-209ENST00000583454 LINC01600Q96MT4 127 aa15.23■□□□□ 0.03
TSEN54-209ENST00000583454 E9PLD3 99 aa15.22■□□□□ 0.03
TSEN54-209ENST00000583454 SMIM13P0DJ93 91 aa15.22■□□□□ 0.03
TSEN54-209ENST00000583454 SPINK6Q6UWN8 80 aa15.22■□□□□ 0.03
TSEN54-209ENST00000583454 LINC00587B1AMM8 73 aa15.21■□□□□ 0.03
TSEN54-209ENST00000583454 NMUP48645 174 aa15.21■□□□□ 0.03
TSEN54-209ENST00000583454 A0A0U1RRA0 63 aa15.2■□□□□ 0.02
TSEN54-209ENST00000583454 MEIG1Q5JSS6 88 aa15.2■□□□□ 0.02
TSEN54-209ENST00000583454 HIST3H2BBQ8N257 126 aa15.2■□□□□ 0.02
TSEN54-209ENST00000583454 VPREB1P12018 145 aa15.19■□□□□ 0.02
TSEN54-209ENST00000583454 LGALS3P17931 250 aaKnown RBP15.19■□□□□ 0.02
TSEN54-209ENST00000583454 LINC00167Q96N53 147 aa15.19■□□□□ 0.02
TSEN54-209ENST00000583454 IGLV7-43P04211 117 aa15.18■□□□□ 0.02
TSEN54-209ENST00000583454 RPL24P83731 157 aaKnown RBP15.17■□□□□ 0.02
TSEN54-209ENST00000583454 NKAPP1Q8N9T2 125 aa15.17■□□□□ 0.02
TSEN54-209ENST00000583454 MIR7-3HGQ8N6C7 128 aa15.16■□□□□ 0.02
TSEN54-209ENST00000583454 Q8NDZ9 215 aa15.16■□□□□ 0.02
TSEN54-209ENST00000583454 HIST1H2BLQ99880 126 aa15.16■□□□□ 0.02
TSEN54-209ENST00000583454 S100A6P06703 90 aa15.15■□□□□ 0.02
TSEN54-209ENST00000583454 C20orf202A1L168 122 aa15.14■□□□□ 0.01
TSEN54-209ENST00000583454 KRTAP10-8P60410 259 aa15.14■□□□□ 0.01
TSEN54-209ENST00000583454 GAGE10A6NGK3 116 aa15.13■□□□□ 0.01
TSEN54-209ENST00000583454 S100A2P29034 98 aa15.13■□□□□ 0.01
TSEN54-209ENST00000583454 RPL37AP8A6NKH3 93 aa15.12■□□□□ 0.01
TSEN54-209ENST00000583454 AKR1D1P51857 326 aa15.1■□□□□ 0.01
TSEN54-209ENST00000583454 IGKV2D-26A0A0A0MRZ7 120 aa15.09■□□□□ 0.01
TSEN54-209ENST00000583454 LOC107984156A0A0G2JMH3 177 aa15.09■□□□□ 0.01
TSEN54-209ENST00000583454 A0A0J9YXY3 114 aa15.09■□□□□ 0.01
TSEN54-209ENST00000583454 ARL17AQ8IVW1 177 aa15.09■□□□□ 0.01
TSEN54-209ENST00000583454 SNRPEP62304 92 aaKnown RBP15.08■□□□□ 0
TSEN54-209ENST00000583454 IGLV1-50A0A075B6I6 118 aa15.07■□□□□ 0
TSEN54-209ENST00000583454 REG3GQ6UW15 175 aa15.07■□□□□ 0
TSEN54-209ENST00000583454 BOD1L2Q8IYS8 172 aa15.07■□□□□ 0
TSEN54-209ENST00000583454 DAND5Q8N907 189 aa15.07■□□□□ 0
TSEN54-209ENST00000583454 BCE1O60756 84 aa15.06■□□□□ 0
TSEN54-209ENST00000583454 DIRC1Q969H9 104 aa15.06■□□□□ 0
TSEN54-209ENST00000583454 C5orf52A6NGY3 159 aa15.05■□□□□ -0
TSEN54-209ENST00000583454 IGKV2-28A0A075B6P5 120 aa15.04■□□□□ -0
TSEN54-209ENST00000583454 M0R378 163 aa15.04■□□□□ -0
TSEN54-209ENST00000583454 ZNF861PO60384 105 aa15.04■□□□□ -0
TSEN54-209ENST00000583454 IGKV2D-28P01615 120 aa15.04■□□□□ -0
TSEN54-209ENST00000583454 ATOH7Q8N100 152 aa15.04■□□□□ -0
TSEN54-209ENST00000583454 H0Y9J4 135 aa15.03■□□□□ -0
TSEN54-209ENST00000583454 ANKRD39Q53RE8 183 aa15.03■□□□□ -0
TSEN54-209ENST00000583454 ADAMTSL4-AS1Q5T5F5 129 aa15.03■□□□□ -0
TSEN54-209ENST00000583454 ZNF815PA8K554 130 aa15.01□□□□□ -0.01
TSEN54-209ENST00000583454 TTTY13Q9BZ97 58 aa15.01□□□□□ -0.01
TSEN54-209ENST00000583454 LITAFQ99732 161 aa15□□□□□ -0.01
TSEN54-209ENST00000583454 TIMM17BO60830 172 aa14.99□□□□□ -0.01
TSEN54-209ENST00000583454 RPL28P46779 137 aaKnown RBP14.97□□□□□ -0.01
TSEN54-209ENST00000583454 KRTAP13-1Q8IUC0 172 aa14.97□□□□□ -0.01
TSEN54-209ENST00000583454 TMEM126AQ9H061 195 aa14.97□□□□□ -0.01
TSEN54-209ENST00000583454 TMEM238C9JI98 176 aa14.96□□□□□ -0.01
TSEN54-209ENST00000583454 SOSTDC1Q6X4U4 206 aa14.96□□□□□ -0.01
TSEN54-209ENST00000583454 MIEN1Q9BRT3 115 aa14.96□□□□□ -0.01
TSEN54-209ENST00000583454 NCR3O14931 201 aa14.95□□□□□ -0.02
TSEN54-209ENST00000583454 EIF4EBP3O60516 100 aaPredicted RBP14.95□□□□□ -0.02
TSEN54-209ENST00000583454 TRBV10-2A0A0K0K1G8 114 aa14.94□□□□□ -0.02
TSEN54-209ENST00000583454 NDUFC2O95298 119 aa14.94□□□□□ -0.02
TSEN54-209ENST00000583454 LPAP08519 4548 aa14.93□□□□□ -0.02
TSEN54-209ENST00000583454 KRTAP1-4P0C5Y4 121 aa14.91□□□□□ -0.02
TSEN54-209ENST00000583454 UBE2AP49459 152 aa14.91□□□□□ -0.02
TSEN54-209ENST00000583454 NPC2P61916 151 aa14.91□□□□□ -0.02
TSEN54-209ENST00000583454 PCP2Q8IVA1 136 aa14.91□□□□□ -0.02
TSEN54-209ENST00000583454 LINC00308Q8TCZ7 52 aa14.91□□□□□ -0.02
TSEN54-209ENST00000583454 KCNQ1DNQ9H478 68 aa14.91□□□□□ -0.02
TSEN54-209ENST00000583454 SPANXB1Q9NS25 103 aaPredicted RBP14.91□□□□□ -0.02
TSEN54-209ENST00000583454 TRBV10-3A0A0K0K1G6 114 aa14.89□□□□□ -0.03
TSEN54-209ENST00000583454 PRYO14603 147 aa14.88□□□□□ -0.03
TSEN54-209ENST00000583454 FAM19A1Q7Z5A9 133 aa14.88□□□□□ -0.03
TSEN54-209ENST00000583454 SCGB1D1O95968 90 aa14.87□□□□□ -0.03
TSEN54-209ENST00000583454 SCGB1D4Q6XE38 83 aa14.87□□□□□ -0.03
TSEN54-209ENST00000583454 HSBP1L1C9JCN9 74 aa14.86□□□□□ -0.03
TSEN54-209ENST00000583454 SPRR1AP35321 89 aa14.86□□□□□ -0.03
TSEN54-209ENST00000583454 PRLHP81277 87 aa14.86□□□□□ -0.03
TSEN54-209ENST00000583454 DDTP30046 118 aa14.85□□□□□ -0.03
TSEN54-209ENST00000583454 SPANXDQ9BXN6 97 aa14.85□□□□□ -0.03
TSEN54-209ENST00000583454 SPANXCQ9NY87 97 aa14.85□□□□□ -0.03
TSEN54-209ENST00000583454 IGLV6-57P01721 117 aa14.84□□□□□ -0.03
TSEN54-209ENST00000583454 LINC00337Q8N6G1 96 aa14.84□□□□□ -0.03
TSEN54-209ENST00000583454 KRTAP4-16G5E9R7 235 aaPredicted RBP14.83□□□□□ -0.04
TSEN54-209ENST00000583454 PRR26Q8N8Z3 221 aa14.82□□□□□ -0.04
TSEN54-209ENST00000583454 S100A12P80511 92 aa14.8□□□□□ -0.04
TSEN54-209ENST00000583454 Q6ZVH6 145 aa14.8□□□□□ -0.04
TSEN54-209ENST00000583454 PPDPFQ9H3Y8 114 aa14.8□□□□□ -0.04
TSEN54-209ENST00000583454 S100A7L2Q5SY68 101 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms