RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 CBLN2Q8IUK8 224 aa6.08□□□□□ -1.44
RFFL-209ENST00000581265 Q8NDZ9 215 aa6.08□□□□□ -1.44
RFFL-209ENST00000581265 NDUFA6P56556 154 aa6.07□□□□□ -1.44
RFFL-209ENST00000581265 C3orf22Q8N5N4 141 aa6.07□□□□□ -1.44
RFFL-209ENST00000581265 ZNF625Q96I27 306 aaPredicted RBP6.07□□□□□ -1.44
RFFL-209ENST00000581265 SEC11CQ9BY50 192 aa6.07□□□□□ -1.44
RFFL-209ENST00000581265 PPDPFQ9H3Y8 114 aa6.07□□□□□ -1.44
RFFL-209ENST00000581265 URB1-AS1Q96HZ7 61 aa6.06□□□□□ -1.44
RFFL-209ENST00000581265 FSIP2Q5CZC0 6907 aa6.06□□□□□ -1.44
RFFL-209ENST00000581265 MUC17Q685J3 4493 aa6.06□□□□□ -1.44
RFFL-209ENST00000581265 LINC00614P0C842 121 aa6.05□□□□□ -1.44
RFFL-209ENST00000581265 SPRR4Q96PI1 79 aa6.05□□□□□ -1.44
RFFL-209ENST00000581265 HIGD2AQ9BW72 106 aa6.05□□□□□ -1.44
RFFL-209ENST00000581265 C11orf86A6NJI1 115 aa6.04□□□□□ -1.44
RFFL-209ENST00000581265 HBDP02042 147 aa6.04□□□□□ -1.44
RFFL-209ENST00000581265 FP248Q71RG6 208 aaPredicted RBP6.04□□□□□ -1.44
RFFL-209ENST00000581265 BAGE3Q86Y29 109 aa6.04□□□□□ -1.44
RFFL-209ENST00000581265 C18orf32Q8TCD1 76 aa6.04□□□□□ -1.44
RFFL-209ENST00000581265 LINC00158P58513 81 aa6.03□□□□□ -1.44
RFFL-209ENST00000581265 TMEM170BQ5T4T1 132 aa6.03□□□□□ -1.44
RFFL-209ENST00000581265 PMCHL1Q16048 86 aa6.02□□□□□ -1.45
RFFL-209ENST00000581265 C4orf48Q5BLP8 95 aa6.02□□□□□ -1.45
RFFL-209ENST00000581265 C10orf91Q5T1B1 145 aa6.02□□□□□ -1.45
RFFL-209ENST00000581265 ZNF706Q9Y5V0 76 aaPredicted RBP6.02□□□□□ -1.45
RFFL-209ENST00000581265 SPRR1AP35321 89 aa6.01□□□□□ -1.45
RFFL-209ENST00000581265 RHEBQ15382 184 aa6.01□□□□□ -1.45
RFFL-209ENST00000581265 TRAPPC1Q9Y5R8 145 aa6.01□□□□□ -1.45
RFFL-209ENST00000581265 IFITM2Q01629 132 aa6□□□□□ -1.45
RFFL-209ENST00000581265 KRTAP13-3Q3SY46 172 aa6□□□□□ -1.45
RFFL-209ENST00000581265 LINC00337Q8N6G1 96 aa6□□□□□ -1.45
RFFL-209ENST00000581265 KCNQ1DNQ9H478 68 aa6□□□□□ -1.45
RFFL-209ENST00000581265 RPS10P5Q9NQ39 176 aa6□□□□□ -1.45
RFFL-209ENST00000581265 CHTOPQ9Y3Y2 248 aaKnown RBP6□□□□□ -1.45
RFFL-209ENST00000581265 A0A0U1RRA0 63 aa5.99□□□□□ -1.45
RFFL-209ENST00000581265 TMEM223A0PJW6 202 aa5.99□□□□□ -1.45
RFFL-209ENST00000581265 KRTAP4-16G5E9R7 235 aaPredicted RBP5.99□□□□□ -1.45
RFFL-209ENST00000581265 PRYO14603 147 aa5.99□□□□□ -1.45
RFFL-209ENST00000581265 SPINK1P00995 79 aa5.99□□□□□ -1.45
RFFL-209ENST00000581265 ASB16-AS1Q495Z4 193 aa5.99□□□□□ -1.45
RFFL-209ENST00000581265 BOD1L2Q8IYS8 172 aa5.99□□□□□ -1.45
RFFL-209ENST00000581265 DAND5Q8N907 189 aa5.99□□□□□ -1.45
RFFL-209ENST00000581265 Q8NBF4 154 aa5.99□□□□□ -1.45
RFFL-209ENST00000581265 SMCR5Q8TEV8 140 aa5.99□□□□□ -1.45
RFFL-209ENST00000581265 ATP6V1G1O75348 118 aa5.98□□□□□ -1.45
RFFL-209ENST00000581265 SMIM13P0DJ93 91 aa5.98□□□□□ -1.45
RFFL-209ENST00000581265 TRAV12-1A0A0B4J245 112 aa5.97□□□□□ -1.45
RFFL-209ENST00000581265 LINC00483Q53H64 154 aa5.97□□□□□ -1.45
RFFL-209ENST00000581265 LINC00587B1AMM8 73 aa5.96□□□□□ -1.46
RFFL-209ENST00000581265 HERV-K104P63124 156 aa5.96□□□□□ -1.46
RFFL-209ENST00000581265 COMMD7Q86VX2 200 aa5.96□□□□□ -1.46
RFFL-209ENST00000581265 MIR7-3HGQ8N6C7 128 aa5.96□□□□□ -1.46
RFFL-209ENST00000581265 TMA7Q9Y2S6 64 aaKnown RBP5.96□□□□□ -1.46
RFFL-209ENST00000581265 TRBV10-3A0A0K0K1G6 114 aa5.95□□□□□ -1.46
RFFL-209ENST00000581265 ETDCA0A1B0GVM5 59 aa5.95□□□□□ -1.46
RFFL-209ENST00000581265 MEIG1Q5JSS6 88 aa5.95□□□□□ -1.46
RFFL-209ENST00000581265 IFI27L1Q96BM0 104 aa5.95□□□□□ -1.46
RFFL-209ENST00000581265 LOC107984156A0A0G2JMH3 177 aa5.94□□□□□ -1.46
RFFL-209ENST00000581265 KRTAP9-7A8MTY7 169 aa5.94□□□□□ -1.46
RFFL-209ENST00000581265 NCR3O14931 201 aa5.94□□□□□ -1.46
RFFL-209ENST00000581265 SEC61BP60468 96 aaKnown RBP5.94□□□□□ -1.46
RFFL-209ENST00000581265 RPS29P62273 56 aaKnown RBP5.94□□□□□ -1.46
RFFL-209ENST00000581265 GAGE2AQ6NT46 116 aa5.94□□□□□ -1.46
RFFL-209ENST00000581265 SSBP3-AS1Q7Z2R9 100 aa5.94□□□□□ -1.46
RFFL-209ENST00000581265 ARL17AQ8IVW1 177 aa5.94□□□□□ -1.46
RFFL-209ENST00000581265 CHCHD1Q96BP2 118 aaKnown RBP5.94□□□□□ -1.46
RFFL-209ENST00000581265 B5MCH6 92 aa5.93□□□□□ -1.46
RFFL-209ENST00000581265 S100A12P80511 92 aa5.93□□□□□ -1.46
RFFL-209ENST00000581265 MAP1LC3CQ9BXW4 147 aa5.93□□□□□ -1.46
RFFL-209ENST00000581265 KRTAP4-1Q9BYQ7 146 aa5.93□□□□□ -1.46
RFFL-209ENST00000581265 NDUFA12Q9UI09 145 aa5.93□□□□□ -1.46
RFFL-209ENST00000581265 MYMXA0A1B0GTQ4 84 aa5.92□□□□□ -1.46
RFFL-209ENST00000581265 ERC2-IT1O76042 136 aa5.92□□□□□ -1.46
RFFL-209ENST00000581265 Q8N377 158 aa5.92□□□□□ -1.46
RFFL-209ENST00000581265 TRBV10-2A0A0K0K1G8 114 aa5.91□□□□□ -1.46
RFFL-209ENST00000581265 MOBPQ13875 183 aa5.91□□□□□ -1.46
RFFL-209ENST00000581265 FAM19A2Q8N3H0 131 aa5.91□□□□□ -1.46
RFFL-209ENST00000581265 IGLV9-49A0A0B4J1Y8 123 aa5.9□□□□□ -1.46
RFFL-209ENST00000581265 SLC25A20O43772 301 aa5.9□□□□□ -1.46
RFFL-209ENST00000581265 APOC3P02656 99 aa5.9□□□□□ -1.46
RFFL-209ENST00000581265 DDTP30046 118 aa5.9□□□□□ -1.46
RFFL-209ENST00000581265 Q6ZRX8 168 aa5.9□□□□□ -1.46
RFFL-209ENST00000581265 Q9BRP9 147 aa5.9□□□□□ -1.46
RFFL-209ENST00000581265 SNAPINO95295 136 aa5.89□□□□□ -1.47
RFFL-209ENST00000581265 YPEL4Q96NS1 127 aa5.89□□□□□ -1.47
RFFL-209ENST00000581265 XP32Q5T750 250 aa5.88□□□□□ -1.47
RFFL-209ENST00000581265 SVBPQ8N300 66 aa5.88□□□□□ -1.47
RFFL-209ENST00000581265 LEPROTO15243 131 aa5.87□□□□□ -1.47
RFFL-209ENST00000581265 HSBP1O75506 76 aa5.87□□□□□ -1.47
RFFL-209ENST00000581265 NDUFC2O95298 119 aa5.87□□□□□ -1.47
RFFL-209ENST00000581265 IGLV6-57P01721 117 aa5.87□□□□□ -1.47
RFFL-209ENST00000581265 TSPEAR-AS2P59090 65 aa5.87□□□□□ -1.47
RFFL-209ENST00000581265 SPANXB1Q9NS25 103 aaPredicted RBP5.87□□□□□ -1.47
RFFL-209ENST00000581265 JOSD1Q15040 202 aaPredicted RBP5.86□□□□□ -1.47
RFFL-209ENST00000581265 NDUFA5Q16718 116 aa5.86□□□□□ -1.47
RFFL-209ENST00000581265 C5orf52A6NGY3 159 aa5.85□□□□□ -1.47
RFFL-209ENST00000581265 J3QQQ9 107 aa5.85□□□□□ -1.47
RFFL-209ENST00000581265 CFC1BP0CG36 223 aa5.85□□□□□ -1.47
RFFL-209ENST00000581265 S100A7L2Q5SY68 101 aa5.85□□□□□ -1.47
RFFL-209ENST00000581265 MIEN1Q9BRT3 115 aa5.85□□□□□ -1.47
RFFL-209ENST00000581265 H0Y8G0 127 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms