RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 RPL28P46779 137 aaKnown RBP16.07■□□□□ 0.16
LINC00271-207ENST00000580741 IGLV1-50A0A075B6I6 118 aa16.05■□□□□ 0.16
LINC00271-207ENST00000580741 RPL24P83731 157 aaKnown RBP16.05■□□□□ 0.16
LINC00271-207ENST00000580741 PMCHL2Q9BQD1 86 aa16.05■□□□□ 0.16
LINC00271-207ENST00000580741 HSPB8Q9UJY1 196 aa16.05■□□□□ 0.16
LINC00271-207ENST00000580741 SMIM13P0DJ93 91 aa16.04■□□□□ 0.16
LINC00271-207ENST00000580741 UBE2AP49459 152 aa16.02■□□□□ 0.16
LINC00271-207ENST00000580741 MEIG1Q5JSS6 88 aa16.02■□□□□ 0.16
LINC00271-207ENST00000580741 TSPEAR-AS2P59090 65 aa16.01■□□□□ 0.15
LINC00271-207ENST00000580741 NDUFA12Q9UI09 145 aa16.01■□□□□ 0.15
LINC00271-207ENST00000580741 TMEM238C9JI98 176 aa16■□□□□ 0.15
LINC00271-207ENST00000580741 PLNP26678 52 aa15.99■□□□□ 0.15
LINC00271-207ENST00000580741 KRTAP13-1Q8IUC0 172 aa15.99■□□□□ 0.15
LINC00271-207ENST00000580741 ATP6V1G1O75348 118 aa15.98■□□□□ 0.15
LINC00271-207ENST00000580741 DPM2O94777 84 aa15.98■□□□□ 0.15
LINC00271-207ENST00000580741 HERV-K104P63124 156 aa15.98■□□□□ 0.15
LINC00271-207ENST00000580741 HIST1H2BKO60814 126 aa15.97■□□□□ 0.15
LINC00271-207ENST00000580741 HIST1H2BJP06899 126 aa15.97■□□□□ 0.15
LINC00271-207ENST00000580741 HIST1H2BOP23527 126 aa15.97■□□□□ 0.15
LINC00271-207ENST00000580741 HIST1H2BBP33778 126 aa15.97■□□□□ 0.15
LINC00271-207ENST00000580741 HIST1H2BDP58876 126 aa15.97■□□□□ 0.15
LINC00271-207ENST00000580741 HIST1H2BCP62807 126 aa15.97■□□□□ 0.15
LINC00271-207ENST00000580741 HIST2H2BEQ16778 126 aa15.97■□□□□ 0.15
LINC00271-207ENST00000580741 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.97■□□□□ 0.15
LINC00271-207ENST00000580741 MIR7-3HGQ8N6C7 128 aa15.97■□□□□ 0.15
LINC00271-207ENST00000580741 HIST1H2BHQ93079 126 aa15.97■□□□□ 0.15
LINC00271-207ENST00000580741 HIST1H2BNQ99877 126 aa15.97■□□□□ 0.15
LINC00271-207ENST00000580741 HIST1H2BMQ99879 126 aa15.97■□□□□ 0.15
LINC00271-207ENST00000580741 TMEM126AQ9H061 195 aa15.97■□□□□ 0.15
LINC00271-207ENST00000580741 MYMXA0A1B0GTQ4 84 aa15.96■□□□□ 0.15
LINC00271-207ENST00000580741 LEPROTO15243 131 aa15.96■□□□□ 0.15
LINC00271-207ENST00000580741 RPL13AP40429 203 aaKnown RBP15.95■□□□□ 0.14
LINC00271-207ENST00000580741 PRLHP81277 87 aa15.95■□□□□ 0.14
LINC00271-207ENST00000580741 M0R378 163 aa15.94■□□□□ 0.14
LINC00271-207ENST00000580741 IGKCP01834 107 aa15.94■□□□□ 0.14
LINC00271-207ENST00000580741 FAM19A1Q7Z5A9 133 aa15.94■□□□□ 0.14
LINC00271-207ENST00000580741 PLEKHB2Q96CS7 222 aa15.94■□□□□ 0.14
LINC00271-207ENST00000580741 MAP1LC3CQ9BXW4 147 aa15.94■□□□□ 0.14
LINC00271-207ENST00000580741 BOD1L2Q8IYS8 172 aa15.93■□□□□ 0.14
LINC00271-207ENST00000580741 A0A087X002 238 aa15.92■□□□□ 0.14
LINC00271-207ENST00000580741 ANAPC11Q9NYG5 84 aa15.92■□□□□ 0.14
LINC00271-207ENST00000580741 HERVK_113P61574 105 aa15.91■□□□□ 0.14
LINC00271-207ENST00000580741 J3QQQ9 107 aa15.9■□□□□ 0.14
LINC00271-207ENST00000580741 NCR3O14931 201 aa15.9■□□□□ 0.14
LINC00271-207ENST00000580741 LINC00587B1AMM8 73 aa15.89■□□□□ 0.13
LINC00271-207ENST00000580741 DAND5Q8N907 189 aa15.89■□□□□ 0.13
LINC00271-207ENST00000580741 LGALS3P17931 250 aaKnown RBP15.86■□□□□ 0.13
LINC00271-207ENST00000580741 CRYGAP11844 174 aa15.85■□□□□ 0.13
LINC00271-207ENST00000580741 LPAP08519 4548 aa15.85■□□□□ 0.13
LINC00271-207ENST00000580741 SYS1-DBNDD2H3BUS1 97 aa15.84■□□□□ 0.13
LINC00271-207ENST00000580741 NMUP48645 174 aa15.82■□□□□ 0.12
LINC00271-207ENST00000580741 TYMSOSQ8TAI1 123 aa15.81■□□□□ 0.12
LINC00271-207ENST00000580741 HIGD2AQ9BW72 106 aa15.8■□□□□ 0.12
LINC00271-207ENST00000580741 KRTAP13-2Q52LG2 175 aa15.79■□□□□ 0.12
LINC00271-207ENST00000580741 IGKV2D-26A0A0A0MRZ7 120 aa15.78■□□□□ 0.12
LINC00271-207ENST00000580741 E9PLD3 99 aa15.78■□□□□ 0.12
LINC00271-207ENST00000580741 PRYO14603 147 aa15.78■□□□□ 0.12
LINC00271-207ENST00000580741 TRBV10-3A0A0K0K1G6 114 aa15.77■□□□□ 0.12
LINC00271-207ENST00000580741 TSPAN13O95857 204 aa15.77■□□□□ 0.12
LINC00271-207ENST00000580741 LINC01545Q5VT33 79 aa15.76■□□□□ 0.11
LINC00271-207ENST00000580741 LOC107984156A0A0G2JMH3 177 aa15.75■□□□□ 0.11
LINC00271-207ENST00000580741 FAM229BQ4G0N7 80 aa15.75■□□□□ 0.11
LINC00271-207ENST00000580741 ARL17AQ8IVW1 177 aa15.75■□□□□ 0.11
LINC00271-207ENST00000580741 KCNQ1DNQ9H478 68 aa15.75■□□□□ 0.11
LINC00271-207ENST00000580741 A0A0J9YXY3 114 aa15.74■□□□□ 0.11
LINC00271-207ENST00000580741 PET117Q6UWS5 81 aa15.74■□□□□ 0.11
LINC00271-207ENST00000580741 NPC2P61916 151 aa15.73■□□□□ 0.11
LINC00271-207ENST00000580741 MIEN1Q9BRT3 115 aa15.73■□□□□ 0.11
LINC00271-207ENST00000580741 C3orf79P0CE67 100 aa15.72■□□□□ 0.11
LINC00271-207ENST00000580741 SPRR1AP35321 89 aa15.72■□□□□ 0.11
LINC00271-207ENST00000580741 COA6Q5JTJ3 125 aaKnown RBP15.72■□□□□ 0.11
LINC00271-207ENST00000580741 ADAMTSL4-AS1Q5T5F5 129 aa15.71■□□□□ 0.11
LINC00271-207ENST00000580741 LINC00337Q8N6G1 96 aa15.71■□□□□ 0.11
LINC00271-207ENST00000580741 EIF4EBP3O60516 100 aaPredicted RBP15.7■□□□□ 0.1
LINC00271-207ENST00000580741 PRR4Q16378 134 aa15.7■□□□□ 0.1
LINC00271-207ENST00000580741 SOSTDC1Q6X4U4 206 aa15.7■□□□□ 0.1
LINC00271-207ENST00000580741 ETDCA0A1B0GVM5 59 aa15.69■□□□□ 0.1
LINC00271-207ENST00000580741 KRTAP4-16G5E9R7 235 aaPredicted RBP15.69■□□□□ 0.1
LINC00271-207ENST00000580741 KRTDAPP60985 99 aa15.69■□□□□ 0.1
LINC00271-207ENST00000580741 DDTP30046 118 aa15.68■□□□□ 0.1
LINC00271-207ENST00000580741 SPANXB1Q9NS25 103 aaPredicted RBP15.68■□□□□ 0.1
LINC00271-207ENST00000580741 TRBV10-2A0A0K0K1G8 114 aa15.67■□□□□ 0.1
LINC00271-207ENST00000580741 SPRR4Q96PI1 79 aa15.66■□□□□ 0.1
LINC00271-207ENST00000580741 RNF213Q63HN8 5207 aa15.66■□□□□ 0.1
LINC00271-207ENST00000580741 C3orf22Q8N5N4 141 aa15.65■□□□□ 0.1
LINC00271-207ENST00000580741 TTTY13Q9BZ97 58 aa15.65■□□□□ 0.1
LINC00271-207ENST00000580741 NDUFC2O95298 119 aa15.64■□□□□ 0.09
LINC00271-207ENST00000580741 S100A12P80511 92 aa15.64■□□□□ 0.09
LINC00271-207ENST00000580741 SMCR5Q8TEV8 140 aa15.64■□□□□ 0.09
LINC00271-207ENST00000580741 LINC00304Q8N9R0 145 aa15.63■□□□□ 0.09
LINC00271-207ENST00000580741 LITAFQ99732 161 aa15.62■□□□□ 0.09
LINC00271-207ENST00000580741 ZNF815PA8K554 130 aa15.61■□□□□ 0.09
LINC00271-207ENST00000580741 B5MCH6 92 aa15.61■□□□□ 0.09
LINC00271-207ENST00000580741 S100A7L2Q5SY68 101 aa15.61■□□□□ 0.09
LINC00271-207ENST00000580741 IGLV6-57P01721 117 aa15.6■□□□□ 0.09
LINC00271-207ENST00000580741 ZNF706Q9Y5V0 76 aaPredicted RBP15.6■□□□□ 0.09
LINC00271-207ENST00000580741 PPDPFQ9H3Y8 114 aa15.59■□□□□ 0.09
LINC00271-207ENST00000580741 LINC00308Q8TCZ7 52 aa15.57■□□□□ 0.08
LINC00271-207ENST00000580741 TIMM17BO60830 172 aa15.56■□□□□ 0.08
LINC00271-207ENST00000580741 ATOH7Q8N100 152 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms