RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 CFC1BP0CG36 223 aa10.56□□□□□ -0.72
NDEL1-209ENST00000580738 ZNF625Q96I27 306 aaPredicted RBP10.56□□□□□ -0.72
NDEL1-209ENST00000580738 IGLV5-39A0A0G2JS06 123 aa10.55□□□□□ -0.72
NDEL1-209ENST00000580738 H3BRM9 83 aa10.55□□□□□ -0.72
NDEL1-209ENST00000580738 LORP23490 312 aaPredicted RBP10.55□□□□□ -0.72
NDEL1-209ENST00000580738 COX17Q14061 63 aa10.54□□□□□ -0.72
NDEL1-209ENST00000580738 PMVKQ15126 192 aa10.54□□□□□ -0.72
NDEL1-209ENST00000580738 KIAA1644Q3SXP7 199 aa10.54□□□□□ -0.72
NDEL1-209ENST00000580738 hCG_2014768A0A024R1R8 64 aa10.53□□□□□ -0.72
NDEL1-209ENST00000580738 SMCR5Q8TEV8 140 aa10.53□□□□□ -0.72
NDEL1-209ENST00000580738 KRTAP10-6P60371 365 aaPredicted RBP10.52□□□□□ -0.73
NDEL1-209ENST00000580738 FAM19A2Q8N3H0 131 aa10.51□□□□□ -0.73
NDEL1-209ENST00000580738 RPS29P62273 56 aaKnown RBP10.5□□□□□ -0.73
NDEL1-209ENST00000580738 MOBPQ13875 183 aa10.5□□□□□ -0.73
NDEL1-209ENST00000580738 LINC00483Q53H64 154 aa10.5□□□□□ -0.73
NDEL1-209ENST00000580738 SLC25A20O43772 301 aa10.49□□□□□ -0.73
NDEL1-209ENST00000580738 IGLV9-49A0A0B4J1Y8 123 aa10.48□□□□□ -0.73
NDEL1-209ENST00000580738 MT-ND4LP03901 98 aa10.48□□□□□ -0.73
NDEL1-209ENST00000580738 IGLC3P0DOY3 106 aa10.48□□□□□ -0.73
NDEL1-209ENST00000580738 ZNF22P17026 224 aaPredicted RBP10.48□□□□□ -0.73
NDEL1-209ENST00000580738 GAGE2AQ6NT46 116 aa10.48□□□□□ -0.73
NDEL1-209ENST00000580738 ANAPC16Q96DE5 110 aa10.48□□□□□ -0.73
NDEL1-209ENST00000580738 LINC01546A6NGU7 62 aa10.47□□□□□ -0.73
NDEL1-209ENST00000580738 LINC01549A6NIU2 74 aa10.47□□□□□ -0.73
NDEL1-209ENST00000580738 PRYO14603 147 aa10.46□□□□□ -0.73
NDEL1-209ENST00000580738 SPRR1AP35321 89 aa10.46□□□□□ -0.73
NDEL1-209ENST00000580738 PCOTHQ58A44 107 aa10.46□□□□□ -0.73
NDEL1-209ENST00000580738 IGLV8-61A0A075B6I0 122 aa10.45□□□□□ -0.74
NDEL1-209ENST00000580738 KRTAP4-16G5E9R7 235 aaPredicted RBP10.45□□□□□ -0.74
NDEL1-209ENST00000580738 SSBP3-AS1Q7Z2R9 100 aa10.45□□□□□ -0.74
NDEL1-209ENST00000580738 A0A0U1RRA0 63 aa10.44□□□□□ -0.74
NDEL1-209ENST00000580738 LINC00158P58513 81 aa10.44□□□□□ -0.74
NDEL1-209ENST00000580738 ETDCA0A1B0GVM5 59 aa10.43□□□□□ -0.74
NDEL1-209ENST00000580738 NDUFA6P56556 154 aa10.43□□□□□ -0.74
NDEL1-209ENST00000580738 KCNQ1DNQ9H478 68 aa10.43□□□□□ -0.74
NDEL1-209ENST00000580738 ERC2-IT1O76042 136 aa10.42□□□□□ -0.74
NDEL1-209ENST00000580738 NCR3O14931 201 aa10.41□□□□□ -0.74
NDEL1-209ENST00000580738 BOD1L2Q8IYS8 172 aa10.39□□□□□ -0.75
NDEL1-209ENST00000580738 KRTAP9-7A8MTY7 169 aa10.38□□□□□ -0.75
NDEL1-209ENST00000580738 M0R2T5 61 aa10.38□□□□□ -0.75
NDEL1-209ENST00000580738 SFTA2Q6UW10 78 aa10.38□□□□□ -0.75
NDEL1-209ENST00000580738 TRBV10-3A0A0K0K1G6 114 aa10.37□□□□□ -0.75
NDEL1-209ENST00000580738 FA2HQ7L5A8 372 aa10.37□□□□□ -0.75
NDEL1-209ENST00000580738 C11orf86A6NJI1 115 aa10.36□□□□□ -0.75
NDEL1-209ENST00000580738 B5MCH6 92 aa10.36□□□□□ -0.75
NDEL1-209ENST00000580738 TMEM170BQ5T4T1 132 aa10.36□□□□□ -0.75
NDEL1-209ENST00000580738 A0A096LNJ9 63 aa10.35□□□□□ -0.75
NDEL1-209ENST00000580738 SMCO4Q9NRQ5 59 aa10.35□□□□□ -0.75
NDEL1-209ENST00000580738 C9orf92A6NGG3 77 aa10.34□□□□□ -0.75
NDEL1-209ENST00000580738 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.34□□□□□ -0.75
NDEL1-209ENST00000580738 SMIM13P0DJ93 91 aa10.34□□□□□ -0.75
NDEL1-209ENST00000580738 Q9BRP9 147 aa10.34□□□□□ -0.75
NDEL1-209ENST00000580738 ATP6V1G1O75348 118 aa10.31□□□□□ -0.76
NDEL1-209ENST00000580738 C9orf153Q5TBE3 101 aa10.31□□□□□ -0.76
NDEL1-209ENST00000580738 BAGE3Q86Y29 109 aa10.3□□□□□ -0.76
NDEL1-209ENST00000580738 MIR7-3HGQ8N6C7 128 aa10.3□□□□□ -0.76
NDEL1-209ENST00000580738 FLGP20930 4061 aaPredicted RBP10.29□□□□□ -0.76
NDEL1-209ENST00000580738 TRAV9-1A0A075B6T8 112 aa10.29□□□□□ -0.76
NDEL1-209ENST00000580738 PMCHL1Q16048 86 aa10.27□□□□□ -0.77
NDEL1-209ENST00000580738 MEIG1Q5JSS6 88 aa10.27□□□□□ -0.77
NDEL1-209ENST00000580738 Q6ZRX8 168 aa10.27□□□□□ -0.77
NDEL1-209ENST00000580738 URB1-AS1Q96HZ7 61 aa10.27□□□□□ -0.77
NDEL1-209ENST00000580738 S100A12P80511 92 aa10.26□□□□□ -0.77
NDEL1-209ENST00000580738 TMEM223A0PJW6 202 aa10.25□□□□□ -0.77
NDEL1-209ENST00000580738 FABP9Q0Z7S8 132 aa10.25□□□□□ -0.77
NDEL1-209ENST00000580738 COX6B2Q6YFQ2 88 aa10.24□□□□□ -0.77
NDEL1-209ENST00000580738 HBDP02042 147 aa10.23□□□□□ -0.77
NDEL1-209ENST00000580738 DDTP30046 118 aa10.23□□□□□ -0.77
NDEL1-209ENST00000580738 HRCT1Q6UXD1 115 aa10.23□□□□□ -0.77
NDEL1-209ENST00000580738 ST20-AS1Q8NBB2 130 aa10.22□□□□□ -0.77
NDEL1-209ENST00000580738 CHTOPQ9Y3Y2 248 aaKnown RBP10.22□□□□□ -0.77
NDEL1-209ENST00000580738 IGLV6-57P01721 117 aa10.21□□□□□ -0.77
NDEL1-209ENST00000580738 LINC00614P0C842 121 aa10.21□□□□□ -0.77
NDEL1-209ENST00000580738 LIMD2Q9BT23 127 aa10.2□□□□□ -0.78
NDEL1-209ENST00000580738 HERV-K104P63124 156 aa10.19□□□□□ -0.78
NDEL1-209ENST00000580738 USH2AO75445 5202 aa10.19□□□□□ -0.78
NDEL1-209ENST00000580738 SSPOA2VEC9 5147 aa10.19□□□□□ -0.78
NDEL1-209ENST00000580738 S100PP25815 95 aa10.18□□□□□ -0.78
NDEL1-209ENST00000580738 C18orf32Q8TCD1 76 aa10.18□□□□□ -0.78
NDEL1-209ENST00000580738 TRBV10-2A0A0K0K1G8 114 aa10.17□□□□□ -0.78
NDEL1-209ENST00000580738 COX19Q49B96 90 aa10.16□□□□□ -0.78
NDEL1-209ENST00000580738 LOC107984156A0A0G2JMH3 177 aa10.15□□□□□ -0.78
NDEL1-209ENST00000580738 LINC00587B1AMM8 73 aa10.15□□□□□ -0.78
NDEL1-209ENST00000580738 JOSD1Q15040 202 aaPredicted RBP10.15□□□□□ -0.78
NDEL1-209ENST00000580738 ARL17AQ8IVW1 177 aa10.15□□□□□ -0.78
NDEL1-209ENST00000580738 SEC11CQ9BY50 192 aa10.15□□□□□ -0.78
NDEL1-209ENST00000580738 MAP1LC3CQ9BXW4 147 aa10.14□□□□□ -0.79
NDEL1-209ENST00000580738 MYMXA0A1B0GTQ4 84 aa10.12□□□□□ -0.79
NDEL1-209ENST00000580738 S100A7L2Q5SY68 101 aa10.12□□□□□ -0.79
NDEL1-209ENST00000580738 SPANXB1Q9NS25 103 aaPredicted RBP10.12□□□□□ -0.79
NDEL1-209ENST00000580738 TRAV23DV6A0A075B6W5 121 aa10.11□□□□□ -0.79
NDEL1-209ENST00000580738 RPL37P61927 97 aaKnown RBP10.11□□□□□ -0.79
NDEL1-209ENST00000580738 TRAV12-1A0A0B4J245 112 aa10.1□□□□□ -0.79
NDEL1-209ENST00000580738 ZNF73O43830 326 aaPredicted RBP10.1□□□□□ -0.79
NDEL1-209ENST00000580738 TMEM218A2RU14 115 aa10.08□□□□□ -0.8
NDEL1-209ENST00000580738 C5orf52A6NGY3 159 aa10.08□□□□□ -0.8
NDEL1-209ENST00000580738 SPRR1BP22528 89 aa10.08□□□□□ -0.8
NDEL1-209ENST00000580738 TSPEAR-AS2P59090 65 aa10.08□□□□□ -0.8
NDEL1-209ENST00000580738 RPS10P5Q9NQ39 176 aa10.08□□□□□ -0.8
NDEL1-209ENST00000580738 IFI27L1Q96BM0 104 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms