RNA–Protein interactions for RNA: ENST00000580542.5

ITGB4-207, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-207ENST00000580542 INAFM1C9JVW0 142 aa9.53□□□□□ -0.88
ITGB4-207ENST00000580542 DYNLRB2Q8TF09 96 aa9.53□□□□□ -0.88
ITGB4-207ENST00000580542 TRBV10-1A0A0K0K1A3 114 aa9.52□□□□□ -0.88
ITGB4-207ENST00000580542 M0R2N4 97 aa9.52□□□□□ -0.88
ITGB4-207ENST00000580542 IGHV3-53P01767 116 aa9.52□□□□□ -0.88
ITGB4-207ENST00000580542 C1orf158Q8N1D5 194 aa9.52□□□□□ -0.88
ITGB4-207ENST00000580542 IGKV3OR2-268A0A0C4DH90 116 aa9.52□□□□□ -0.89
ITGB4-207ENST00000580542 CXCL6P80162 114 aa9.52□□□□□ -0.89
ITGB4-207ENST00000580542 PRYO14603 147 aa9.51□□□□□ -0.89
ITGB4-207ENST00000580542 CDC42SE2Q9NRR3 84 aa9.51□□□□□ -0.89
ITGB4-207ENST00000580542 LRCOL1A6NCL2 159 aa9.51□□□□□ -0.89
ITGB4-207ENST00000580542 FN1P02751 2386 aaKnown RBP9.5□□□□□ -0.89
ITGB4-207ENST00000580542 MAP6D1Q9H9H5 199 aa9.5□□□□□ -0.89
ITGB4-207ENST00000580542 BPY2O14599 106 aa9.5□□□□□ -0.89
ITGB4-207ENST00000580542 FLNBO75369 2602 aaKnown RBP9.5□□□□□ -0.89
ITGB4-207ENST00000580542 SETXQ7Z333 2677 aaKnown RBP9.49□□□□□ -0.89
ITGB4-207ENST00000580542 K7EQD1 137 aa9.49□□□□□ -0.89
ITGB4-207ENST00000580542 NTM-AS1Q6ZSK4 140 aa9.48□□□□□ -0.89
ITGB4-207ENST00000580542 UBE2L6O14933 153 aa9.47□□□□□ -0.89
ITGB4-207ENST00000580542 Q6ZTC4 211 aa9.47□□□□□ -0.89
ITGB4-207ENST00000580542 MRPL55Q7Z7F7 128 aaKnown RBP9.47□□□□□ -0.89
ITGB4-207ENST00000580542 BAHCC1Q9P281 2608 aa9.47□□□□□ -0.89
ITGB4-207ENST00000580542 LOC110117498A0A087WWA1 95 aa9.46□□□□□ -0.89
ITGB4-207ENST00000580542 PRR3P79522 188 aaKnown RBP9.46□□□□□ -0.89
ITGB4-207ENST00000580542 INSP01308 110 aa9.46□□□□□ -0.9
ITGB4-207ENST00000580542 PSPHP1O15172 72 aa9.46□□□□□ -0.9
ITGB4-207ENST00000580542 C6orf223Q8N319 242 aa9.46□□□□□ -0.9
ITGB4-207ENST00000580542 ZNF561-AS1K7EIQ3 104 aa9.45□□□□□ -0.9
ITGB4-207ENST00000580542 ERC2-IT1O76042 136 aa9.45□□□□□ -0.9
ITGB4-207ENST00000580542 KRTAP10-3P60369 221 aa9.44□□□□□ -0.9
ITGB4-207ENST00000580542 DEFB114Q30KQ6 69 aa9.44□□□□□ -0.9
ITGB4-207ENST00000580542 CCL24O00175 119 aa9.43□□□□□ -0.9
ITGB4-207ENST00000580542 NANOS2P60321 138 aaKnown RBP9.43□□□□□ -0.9
ITGB4-207ENST00000580542 KHDC1LQ5JSQ8 128 aa9.43□□□□□ -0.9
ITGB4-207ENST00000580542 Q6ZRP5 223 aa9.42□□□□□ -0.9
ITGB4-207ENST00000580542 HIGD2AQ9BW72 106 aa9.42□□□□□ -0.9
ITGB4-207ENST00000580542 C2CD3Q4AC94 2353 aa9.42□□□□□ -0.9
ITGB4-207ENST00000580542 C6orf99Q4VX62 202 aa9.42□□□□□ -0.9
ITGB4-207ENST00000580542 F8P00451 2351 aa9.41□□□□□ -0.9
ITGB4-207ENST00000580542 Q1T7F1 81 aa9.41□□□□□ -0.9
ITGB4-207ENST00000580542 ODF3L2Q3SX64 289 aa9.41□□□□□ -0.9
ITGB4-207ENST00000580542 hDV103S1A0JD37 113 aa9.41□□□□□ -0.9
ITGB4-207ENST00000580542 TRGV1A0A0A0MS02 117 aa9.4□□□□□ -0.9
ITGB4-207ENST00000580542 CYSRT1A8MQ03 144 aa9.4□□□□□ -0.91
ITGB4-207ENST00000580542 C11orf44Q8N8P7 122 aa9.4□□□□□ -0.91
ITGB4-207ENST00000580542 PDE6GP18545 87 aa9.39□□□□□ -0.91
ITGB4-207ENST00000580542 Q8N9L7 120 aa9.39□□□□□ -0.91
ITGB4-207ENST00000580542 LINC00575Q6W349 94 aa9.38□□□□□ -0.91
ITGB4-207ENST00000580542 NIPBLQ6KC79 2804 aaeCLIP9.38□□□□□ -0.91
ITGB4-207ENST00000580542 SETD2Q9BYW2 2564 aaPredicted RBP9.38□□□□□ -0.91
ITGB4-207ENST00000580542 CD164L2Q6UWJ8 174 aa9.37□□□□□ -0.91
ITGB4-207ENST00000580542 STHQ8IWL8 128 aa9.37□□□□□ -0.91
ITGB4-207ENST00000580542 MUC7Q8TAX7 377 aa9.37□□□□□ -0.91
ITGB4-207ENST00000580542 NOTCH3Q9UM47 2321 aa9.37□□□□□ -0.91
ITGB4-207ENST00000580542 IGHV3OR16-9A0A0B4J2B5 98 aa9.36□□□□□ -0.91
ITGB4-207ENST00000580542 SPATA3Q8NHX4 192 aa9.36□□□□□ -0.91
ITGB4-207ENST00000580542 OCR1Q9BZK8 76 aa9.36□□□□□ -0.91
ITGB4-207ENST00000580542 WNK1Q9H4A3 2382 aa9.36□□□□□ -0.91
ITGB4-207ENST00000580542 C1orf64Q8NEQ6 169 aa9.35□□□□□ -0.91
ITGB4-207ENST00000580542 TRAV22A0A0B4J277 110 aa9.35□□□□□ -0.91
ITGB4-207ENST00000580542 C9orf66Q5T8R8 295 aa9.35□□□□□ -0.91
ITGB4-207ENST00000580542 RBM12B-AS1Q9P1G2 102 aa9.35□□□□□ -0.91
ITGB4-207ENST00000580542 TENM1Q9UKZ4 2725 aa9.35□□□□□ -0.91
ITGB4-207ENST00000580542 Q6ZQY7 126 aa9.34□□□□□ -0.91
ITGB4-207ENST00000580542 IGLV1-51P01701 117 aa9.33□□□□□ -0.92
ITGB4-207ENST00000580542 JMJD1CQ15652 2540 aa9.33□□□□□ -0.92
ITGB4-207ENST00000580542 IGLV4-60A0A075B6I1 120 aa9.32□□□□□ -0.92
ITGB4-207ENST00000580542 NOP10Q9NPE3 64 aaKnown RBP9.32□□□□□ -0.92
ITGB4-207ENST00000580542 A8MU10 97 aa9.31□□□□□ -0.92
ITGB4-207ENST00000580542 KTN1-AS1Q86SY8 53 aa9.31□□□□□ -0.92
ITGB4-207ENST00000580542 LOC100131303A0A0U1RQF7 123 aa9.3□□□□□ -0.92
ITGB4-207ENST00000580542 A8MUN3 132 aa9.3□□□□□ -0.92
ITGB4-207ENST00000580542 TEP1Q99973 2627 aaKnown RBP9.3□□□□□ -0.92
ITGB4-207ENST00000580542 IGKV4-1P06312 121 aa9.29□□□□□ -0.92
ITGB4-207ENST00000580542 GIG44P09565 113 aaPredicted RBP9.29□□□□□ -0.92
ITGB4-207ENST00000580542 VWFP04275 2813 aa9.29□□□□□ -0.92
ITGB4-207ENST00000580542 CMYA5Q8N3K9 4069 aa9.29□□□□□ -0.92
ITGB4-207ENST00000580542 UBE2BP63146 152 aa9.29□□□□□ -0.92
ITGB4-207ENST00000580542 SYCNQ0VAF6 134 aa9.29□□□□□ -0.92
ITGB4-207ENST00000580542 PRB2P02812 416 aaPredicted RBP9.28□□□□□ -0.92
ITGB4-207ENST00000580542 FAM30AQ9NZY2 134 aa9.28□□□□□ -0.92
ITGB4-207ENST00000580542 CMC4P56277 68 aaPredicted RBP9.28□□□□□ -0.92
ITGB4-207ENST00000580542 CELA1Q9UNI1 258 aa9.28□□□□□ -0.92
ITGB4-207ENST00000580542 C19orf73Q9NVV2 129 aa9.27□□□□□ -0.93
ITGB4-207ENST00000580542 C4orf48Q5BLP8 95 aa9.27□□□□□ -0.93
ITGB4-207ENST00000580542 WFDC10AQ9H1F0 79 aa9.27□□□□□ -0.93
ITGB4-207ENST00000580542 PRR4Q16378 134 aa9.26□□□□□ -0.93
ITGB4-207ENST00000580542 SPTSSBQ8NFR3 76 aa9.26□□□□□ -0.93
ITGB4-207ENST00000580542 TRGV2A0A075B6R0 118 aa9.25□□□□□ -0.93
ITGB4-207ENST00000580542 KRTAP24-1Q3LI83 254 aa9.25□□□□□ -0.93
ITGB4-207ENST00000580542 Q8IZM0 81 aa9.25□□□□□ -0.93
ITGB4-207ENST00000580542 C16orf74Q96GX8 76 aa9.25□□□□□ -0.93
ITGB4-207ENST00000580542 LINC00588Q9Y4M8 146 aa9.25□□□□□ -0.93
ITGB4-207ENST00000580542 FBN1P35555 2871 aaKnown RBP9.25□□□□□ -0.93
ITGB4-207ENST00000580542 ATRQ13535 2644 aa9.25□□□□□ -0.93
ITGB4-207ENST00000580542 LINC00959A0A1B0GUT2 108 aa9.24□□□□□ -0.93
ITGB4-207ENST00000580542 H3BQ85 93 aa9.24□□□□□ -0.93
ITGB4-207ENST00000580542 TRRAPQ9Y4A5 3859 aa9.24□□□□□ -0.93
ITGB4-207ENST00000580542 LYRM9A8MSI8 78 aa9.24□□□□□ -0.93
ITGB4-207ENST00000580542 ANK2Q01484 3957 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms