RNA–Protein interactions for RNA: ENST00000580508.1

RBFOX3-204, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-204ENST00000580508 SEC11CQ9BY50 192 aa12.31□□□□□ -0.44
RBFOX3-204ENST00000580508 SPAG11AQ6PDA7 123 aa12.3□□□□□ -0.44
RBFOX3-204ENST00000580508 SFTA2Q6UW10 78 aa12.3□□□□□ -0.44
RBFOX3-204ENST00000580508 C11orf86A6NJI1 115 aa12.29□□□□□ -0.44
RBFOX3-204ENST00000580508 SPRR4Q96PI1 79 aa12.29□□□□□ -0.44
RBFOX3-204ENST00000580508 HIGD2AQ9BW72 106 aa12.29□□□□□ -0.44
RBFOX3-204ENST00000580508 HBDP02042 147 aa12.27□□□□□ -0.45
RBFOX3-204ENST00000580508 LINC00614P0C842 121 aa12.27□□□□□ -0.45
RBFOX3-204ENST00000580508 C18orf32Q8TCD1 76 aa12.27□□□□□ -0.45
RBFOX3-204ENST00000580508 FP248Q71RG6 208 aaPredicted RBP12.25□□□□□ -0.45
RBFOX3-204ENST00000580508 TMEM170BQ5T4T1 132 aa12.24□□□□□ -0.45
RBFOX3-204ENST00000580508 BAGE3Q86Y29 109 aa12.24□□□□□ -0.45
RBFOX3-204ENST00000580508 KRTAP9-6A0A140TA67 174 aa12.23□□□□□ -0.45
RBFOX3-204ENST00000580508 PMCHL1Q16048 86 aa12.23□□□□□ -0.45
RBFOX3-204ENST00000580508 LINC00158P58513 81 aa12.22□□□□□ -0.45
RBFOX3-204ENST00000580508 IFITM2Q01629 132 aa12.22□□□□□ -0.45
RBFOX3-204ENST00000580508 C10orf91Q5T1B1 145 aa12.22□□□□□ -0.45
RBFOX3-204ENST00000580508 ZNF706Q9Y5V0 76 aaPredicted RBP12.21□□□□□ -0.45
RBFOX3-204ENST00000580508 SPRR1AP35321 89 aa12.2□□□□□ -0.46
RBFOX3-204ENST00000580508 RHEBQ15382 184 aa12.2□□□□□ -0.46
RBFOX3-204ENST00000580508 KRTAP13-3Q3SY46 172 aa12.2□□□□□ -0.46
RBFOX3-204ENST00000580508 PRYO14603 147 aa12.19□□□□□ -0.46
RBFOX3-204ENST00000580508 TMEM223A0PJW6 202 aa12.18□□□□□ -0.46
RBFOX3-204ENST00000580508 KRTAP4-16G5E9R7 235 aaPredicted RBP12.18□□□□□ -0.46
RBFOX3-204ENST00000580508 LINC00337Q8N6G1 96 aa12.18□□□□□ -0.46
RBFOX3-204ENST00000580508 Q8NBF4 154 aa12.18□□□□□ -0.46
RBFOX3-204ENST00000580508 RPS10P5Q9NQ39 176 aa12.18□□□□□ -0.46
RBFOX3-204ENST00000580508 TRAPPC1Q9Y5R8 145 aa12.18□□□□□ -0.46
RBFOX3-204ENST00000580508 A0A0U1RRA0 63 aa12.17□□□□□ -0.46
RBFOX3-204ENST00000580508 C4orf48Q5BLP8 95 aa12.17□□□□□ -0.46
RBFOX3-204ENST00000580508 DAND5Q8N907 189 aa12.17□□□□□ -0.46
RBFOX3-204ENST00000580508 KCNQ1DNQ9H478 68 aa12.17□□□□□ -0.46
RBFOX3-204ENST00000580508 CHTOPQ9Y3Y2 248 aaKnown RBP12.17□□□□□ -0.46
RBFOX3-204ENST00000580508 ASB16-AS1Q495Z4 193 aa12.16□□□□□ -0.46
RBFOX3-204ENST00000580508 SMCR5Q8TEV8 140 aa12.15□□□□□ -0.46
RBFOX3-204ENST00000580508 SMIM13P0DJ93 91 aa12.14□□□□□ -0.47
RBFOX3-204ENST00000580508 LINC00483Q53H64 154 aa12.14□□□□□ -0.47
RBFOX3-204ENST00000580508 BOD1L2Q8IYS8 172 aa12.14□□□□□ -0.47
RBFOX3-204ENST00000580508 SPINK1P00995 79 aa12.13□□□□□ -0.47
RBFOX3-204ENST00000580508 COMMD7Q86VX2 200 aa12.13□□□□□ -0.47
RBFOX3-204ENST00000580508 TRAV12-1A0A0B4J245 112 aa12.12□□□□□ -0.47
RBFOX3-204ENST00000580508 NCR3O14931 201 aa12.11□□□□□ -0.47
RBFOX3-204ENST00000580508 MIR7-3HGQ8N6C7 128 aa12.11□□□□□ -0.47
RBFOX3-204ENST00000580508 KRTAP4-1Q9BYQ7 146 aa12.11□□□□□ -0.47
RBFOX3-204ENST00000580508 ETDCA0A1B0GVM5 59 aa12.09□□□□□ -0.47
RBFOX3-204ENST00000580508 ATP6V1G1O75348 118 aa12.09□□□□□ -0.47
RBFOX3-204ENST00000580508 TRBV10-3A0A0K0K1G6 114 aa12.08□□□□□ -0.48
RBFOX3-204ENST00000580508 HERV-K104P63124 156 aa12.08□□□□□ -0.48
RBFOX3-204ENST00000580508 MEIG1Q5JSS6 88 aa12.08□□□□□ -0.48
RBFOX3-204ENST00000580508 IFI27L1Q96BM0 104 aa12.08□□□□□ -0.48
RBFOX3-204ENST00000580508 RPS29P62273 56 aaKnown RBP12.06□□□□□ -0.48
RBFOX3-204ENST00000580508 B5MCH6 92 aa12.05□□□□□ -0.48
RBFOX3-204ENST00000580508 CHCHD1Q96BP2 118 aaKnown RBP12.05□□□□□ -0.48
RBFOX3-204ENST00000580508 LINC00587B1AMM8 73 aa12.04□□□□□ -0.48
RBFOX3-204ENST00000580508 ERC2-IT1O76042 136 aa12.04□□□□□ -0.48
RBFOX3-204ENST00000580508 SEC61BP60468 96 aaKnown RBP12.04□□□□□ -0.48
RBFOX3-204ENST00000580508 GAGE2AQ6NT46 116 aa12.04□□□□□ -0.48
RBFOX3-204ENST00000580508 Q8N377 158 aa12.04□□□□□ -0.48
RBFOX3-204ENST00000580508 NDUFA12Q9UI09 145 aa12.04□□□□□ -0.48
RBFOX3-204ENST00000580508 LOC107984156A0A0G2JMH3 177 aa12.03□□□□□ -0.48
RBFOX3-204ENST00000580508 SSBP3-AS1Q7Z2R9 100 aa12.03□□□□□ -0.48
RBFOX3-204ENST00000580508 ARL17AQ8IVW1 177 aa12.03□□□□□ -0.48
RBFOX3-204ENST00000580508 LINC01547P58512 204 aaPredicted RBP12.02□□□□□ -0.49
RBFOX3-204ENST00000580508 MOBPQ13875 183 aa12.02□□□□□ -0.49
RBFOX3-204ENST00000580508 MYMXA0A1B0GTQ4 84 aa12□□□□□ -0.49
RBFOX3-204ENST00000580508 Q9BRP9 147 aa12□□□□□ -0.49
RBFOX3-204ENST00000580508 MAP1LC3CQ9BXW4 147 aa12□□□□□ -0.49
RBFOX3-204ENST00000580508 IGLV9-49A0A0B4J1Y8 123 aa11.99□□□□□ -0.49
RBFOX3-204ENST00000580508 TRBV10-2A0A0K0K1G8 114 aa11.99□□□□□ -0.49
RBFOX3-204ENST00000580508 FAM19A2Q8N3H0 131 aa11.99□□□□□ -0.49
RBFOX3-204ENST00000580508 TSPEAR-AS2P59090 65 aa11.98□□□□□ -0.49
RBFOX3-204ENST00000580508 S100A12P80511 92 aa11.98□□□□□ -0.49
RBFOX3-204ENST00000580508 LCE2DQ5TA82 110 aaPredicted RBP11.98□□□□□ -0.49
RBFOX3-204ENST00000580508 YPEL4Q96NS1 127 aa11.98□□□□□ -0.49
RBFOX3-204ENST00000580508 SLC25A20O43772 301 aa11.97□□□□□ -0.49
RBFOX3-204ENST00000580508 DDTP30046 118 aa11.97□□□□□ -0.49
RBFOX3-204ENST00000580508 Q6ZRX8 168 aa11.97□□□□□ -0.49
RBFOX3-204ENST00000580508 XP32Q5T750 250 aa11.96□□□□□ -0.49
RBFOX3-204ENST00000580508 APOC3P02656 99 aa11.95□□□□□ -0.5
RBFOX3-204ENST00000580508 LEPROTO15243 131 aa11.93□□□□□ -0.5
RBFOX3-204ENST00000580508 SNAPINO95295 136 aa11.93□□□□□ -0.5
RBFOX3-204ENST00000580508 IGLV6-57P01721 117 aa11.92□□□□□ -0.5
RBFOX3-204ENST00000580508 SVBPQ8N300 66 aa11.92□□□□□ -0.5
RBFOX3-204ENST00000580508 SPANXB1Q9NS25 103 aaPredicted RBP11.92□□□□□ -0.5
RBFOX3-204ENST00000580508 HSBP1O75506 76 aa11.91□□□□□ -0.5
RBFOX3-204ENST00000580508 NDUFC2O95298 119 aa11.9□□□□□ -0.5
RBFOX3-204ENST00000580508 LCE2CQ5TA81 110 aa11.89□□□□□ -0.51
RBFOX3-204ENST00000580508 J3QQQ9 107 aa11.88□□□□□ -0.51
RBFOX3-204ENST00000580508 H0Y8G0 127 aa11.87□□□□□ -0.51
RBFOX3-204ENST00000580508 NDUFA5Q16718 116 aa11.87□□□□□ -0.51
RBFOX3-204ENST00000580508 PLNP26678 52 aa11.86□□□□□ -0.51
RBFOX3-204ENST00000580508 TRAV23DV6A0A075B6W5 121 aa11.85□□□□□ -0.51
RBFOX3-204ENST00000580508 NMUP48645 174 aa11.85□□□□□ -0.51
RBFOX3-204ENST00000580508 LINC00310P59036 64 aa11.85□□□□□ -0.51
RBFOX3-204ENST00000580508 JOSD1Q15040 202 aaPredicted RBP11.85□□□□□ -0.51
RBFOX3-204ENST00000580508 S100A7L2Q5SY68 101 aa11.85□□□□□ -0.51
RBFOX3-204ENST00000580508 MIEN1Q9BRT3 115 aa11.85□□□□□ -0.51
RBFOX3-204ENST00000580508 LEPROTL1O95214 131 aa11.84□□□□□ -0.51
RBFOX3-204ENST00000580508 KRTAP19-2Q3LHN2 52 aa11.84□□□□□ -0.51
RBFOX3-204ENST00000580508 C9orf153Q5TBE3 101 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms