RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 C9orf66Q5T8R8 295 aa7.19□□□□□ -1.26
TOP3A-209ENST00000580095 C6orf223Q8N319 242 aa7.19□□□□□ -1.26
TOP3A-209ENST00000580095 REG3AQ06141 175 aa7.18□□□□□ -1.26
TOP3A-209ENST00000580095 A0A1B0GUV1 79 aa7.18□□□□□ -1.26
TOP3A-209ENST00000580095 DNAL4O96015 105 aa7.18□□□□□ -1.26
TOP3A-209ENST00000580095 C1orf195Q5TG92 126 aa7.18□□□□□ -1.26
TOP3A-209ENST00000580095 C14orf132Q9NPU4 83 aa7.17□□□□□ -1.26
TOP3A-209ENST00000580095 Q8NDZ9 215 aa7.17□□□□□ -1.26
TOP3A-209ENST00000580095 LYRM9A8MSI8 78 aa7.17□□□□□ -1.26
TOP3A-209ENST00000580095 C10orf25Q5T742 122 aa7.17□□□□□ -1.26
TOP3A-209ENST00000580095 Q8NAQ8 132 aa7.17□□□□□ -1.26
TOP3A-209ENST00000580095 KIAA0087Q14695 138 aa7.16□□□□□ -1.26
TOP3A-209ENST00000580095 LINC01561Q8N1V8 128 aa7.16□□□□□ -1.26
TOP3A-209ENST00000580095 RETNQ9HD89 108 aa7.16□□□□□ -1.26
TOP3A-209ENST00000580095 NCR3O14931 201 aa7.16□□□□□ -1.26
TOP3A-209ENST00000580095 IGHV4-30-4P0DP06 118 aa7.16□□□□□ -1.26
TOP3A-209ENST00000580095 Q8IZM0 81 aa7.16□□□□□ -1.26
TOP3A-209ENST00000580095 KLK12Q9UKR0 248 aa7.16□□□□□ -1.26
TOP3A-209ENST00000580095 ATOX1O00244 68 aa7.15□□□□□ -1.26
TOP3A-209ENST00000580095 APOC4P55056 127 aa7.15□□□□□ -1.26
TOP3A-209ENST00000580095 CD164L2Q6UWJ8 174 aa7.15□□□□□ -1.26
TOP3A-209ENST00000580095 LINC00643Q86TS7 51 aa7.15□□□□□ -1.26
TOP3A-209ENST00000580095 UNQ6190/PRO20217Q6UXQ8 127 aa7.15□□□□□ -1.27
TOP3A-209ENST00000580095 A0A0U1RQV1 116 aa7.14□□□□□ -1.27
TOP3A-209ENST00000580095 ANK2Q01484 3957 aa7.14□□□□□ -1.27
TOP3A-209ENST00000580095 CXCL5P42830 114 aa7.14□□□□□ -1.27
TOP3A-209ENST00000580095 EPM2AB3EWF7 344 aa7.14□□□□□ -1.27
TOP3A-209ENST00000580095 SDIM1Q6ZPB5 146 aa7.14□□□□□ -1.27
TOP3A-209ENST00000580095 NANOS2P60321 138 aaKnown RBP7.13□□□□□ -1.27
TOP3A-209ENST00000580095 SPART-AS1P0CW21 52 aa7.12□□□□□ -1.27
TOP3A-209ENST00000580095 ACYP1P07311 99 aa7.11□□□□□ -1.27
TOP3A-209ENST00000580095 SPAG11BQ08648 103 aa7.11□□□□□ -1.27
TOP3A-209ENST00000580095 COL6A5A8TX70 2615 aa7.11□□□□□ -1.27
TOP3A-209ENST00000580095 H0YGX0 51 aa7.11□□□□□ -1.27
TOP3A-209ENST00000580095 RPL18AQ02543 176 aaKnown RBP7.11□□□□□ -1.27
TOP3A-209ENST00000580095 SERP2Q8N6R1 65 aa7.11□□□□□ -1.27
TOP3A-209ENST00000580095 CYSRT1A8MQ03 144 aa7.1□□□□□ -1.27
TOP3A-209ENST00000580095 FAM19A1Q7Z5A9 133 aa7.1□□□□□ -1.27
TOP3A-209ENST00000580095 XAGE1AQ9HD64 81 aa7.1□□□□□ -1.27
TOP3A-209ENST00000580095 NBEAL1Q6ZS30 2694 aa7.1□□□□□ -1.27
TOP3A-209ENST00000580095 MIFP14174 115 aa7.1□□□□□ -1.27
TOP3A-209ENST00000580095 C6orf99Q4VX62 202 aa7.1□□□□□ -1.27
TOP3A-209ENST00000580095 ENHOQ6UWT2 76 aa7.09□□□□□ -1.27
TOP3A-209ENST00000580095 INAFM2P0DMQ5 153 aa7.09□□□□□ -1.27
TOP3A-209ENST00000580095 IGKV3D-7A0A0C4DH55 119 aa7.08□□□□□ -1.28
TOP3A-209ENST00000580095 HIGD2BQ4VC39 106 aa7.08□□□□□ -1.28
TOP3A-209ENST00000580095 FP248Q71RG6 208 aaPredicted RBP7.08□□□□□ -1.28
TOP3A-209ENST00000580095 WFDC10BQ8IUB3 73 aa7.08□□□□□ -1.28
TOP3A-209ENST00000580095 S100A7L2Q5SY68 101 aa7.08□□□□□ -1.28
TOP3A-209ENST00000580095 LINC00846Q9NV44 126 aa7.08□□□□□ -1.28
TOP3A-209ENST00000580095 LELP1Q5T871 98 aa7.07□□□□□ -1.28
TOP3A-209ENST00000580095 KRTAP10-11P60412 298 aa7.07□□□□□ -1.28
TOP3A-209ENST00000580095 LYPD5Q6UWN5 251 aa7.07□□□□□ -1.28
TOP3A-209ENST00000580095 ORMDL1Q9P0S3 153 aa7.07□□□□□ -1.28
TOP3A-209ENST00000580095 Q6ZTC4 211 aa7.07□□□□□ -1.28
TOP3A-209ENST00000580095 BRK1Q8WUW1 75 aa7.07□□□□□ -1.28
TOP3A-209ENST00000580095 Q8N814 137 aa7.06□□□□□ -1.28
TOP3A-209ENST00000580095 WFDC9Q8NEX5 89 aa7.05□□□□□ -1.28
TOP3A-209ENST00000580095 BAHCC1Q9P281 2608 aa7.05□□□□□ -1.28
TOP3A-209ENST00000580095 A0A087WVE0 104 aa7.04□□□□□ -1.28
TOP3A-209ENST00000580095 KPRPQ5T749 579 aaPredicted RBP7.04□□□□□ -1.28
TOP3A-209ENST00000580095 COX17Q14061 63 aa7.04□□□□□ -1.28
TOP3A-209ENST00000580095 SERP1Q9Y6X1 66 aa7.04□□□□□ -1.28
TOP3A-209ENST00000580095 NDUFC2-KCTD14E9PQ53 114 aa7.04□□□□□ -1.28
TOP3A-209ENST00000580095 PRR34Q9NV39 138 aa7.04□□□□□ -1.28
TOP3A-209ENST00000580095 C6orf48Q9UBA6 75 aa7.04□□□□□ -1.28
TOP3A-209ENST00000580095 PRB2P02812 416 aaPredicted RBP7.03□□□□□ -1.28
TOP3A-209ENST00000580095 OBSCN-AS1Q96MR7 158 aa7.03□□□□□ -1.28
TOP3A-209ENST00000580095 NDUFC2O95298 119 aa7.02□□□□□ -1.29
TOP3A-209ENST00000580095 MGAM2Q2M2H8 2515 aa7.02□□□□□ -1.29
TOP3A-209ENST00000580095 TRBV10-3A0A0K0K1G6 114 aa7.01□□□□□ -1.29
TOP3A-209ENST00000580095 USP17L23D6RBM5 183 aa7.01□□□□□ -1.29
TOP3A-209ENST00000580095 A0A0J9YWU9 116 aa7□□□□□ -1.29
TOP3A-209ENST00000580095 ZNF561-AS1K7EIQ3 104 aa7□□□□□ -1.29
TOP3A-209ENST00000580095 ESRGQ1W209 222 aa7□□□□□ -1.29
TOP3A-209ENST00000580095 LINC00575Q6W349 94 aa7□□□□□ -1.29
TOP3A-209ENST00000580095 CAMK2N2Q96S95 79 aa7□□□□□ -1.29
TOP3A-209ENST00000580095 LINC00474Q9P2X8 69 aa7□□□□□ -1.29
TOP3A-209ENST00000580095 SMIM26A0A096LP01 95 aa6.99□□□□□ -1.29
TOP3A-209ENST00000580095 M0R2N4 97 aa6.99□□□□□ -1.29
TOP3A-209ENST00000580095 Q6ZQY7 126 aa6.99□□□□□ -1.29
TOP3A-209ENST00000580095 KRTAP24-1Q3LI83 254 aa6.98□□□□□ -1.29
TOP3A-209ENST00000580095 Q6ZRU5 148 aa6.98□□□□□ -1.29
TOP3A-209ENST00000580095 LAMTOR3Q9UHA4 124 aa6.98□□□□□ -1.29
TOP3A-209ENST00000580095 TMEM256-PLSCR3K7ERE1 68 aa6.98□□□□□ -1.29
TOP3A-209ENST00000580095 CCKP06307 115 aa6.98□□□□□ -1.29
TOP3A-209ENST00000580095 LINC00167Q96N53 147 aa6.98□□□□□ -1.29
TOP3A-209ENST00000580095 IGKV2D-24A0A075B6R9 120 aa6.97□□□□□ -1.29
TOP3A-209ENST00000580095 IGLV6-57P01721 117 aa6.97□□□□□ -1.29
TOP3A-209ENST00000580095 H7BZZ5 65 aa6.97□□□□□ -1.29
TOP3A-209ENST00000580095 PMAIP1Q13794 54 aa6.97□□□□□ -1.29
TOP3A-209ENST00000580095 C15orf56Q8N910 161 aa6.96□□□□□ -1.3
TOP3A-209ENST00000580095 TRAV23DV6A0A075B6W5 121 aa6.95□□□□□ -1.3
TOP3A-209ENST00000580095 DEFB131BA0A096LNP1 70 aa6.95□□□□□ -1.3
TOP3A-209ENST00000580095 KRTAP26-1Q6PEX3 210 aa6.95□□□□□ -1.3
TOP3A-209ENST00000580095 Q6JHZ5 121 aa6.95□□□□□ -1.3
TOP3A-209ENST00000580095 C20orf197Q8N268 126 aa6.95□□□□□ -1.3
TOP3A-209ENST00000580095 STAB2Q8WWQ8 2551 aa6.95□□□□□ -1.3
TOP3A-209ENST00000580095 JMJD7-PLA2G4BH0Y9G9 81 aa6.94□□□□□ -1.3
TOP3A-209ENST00000580095 ZNF73O43830 326 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms