RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 FAM104AQ969W3 186 aa2.76□□□□□ -1.97
CCDC178-209ENST00000579947 NKX6-2Q9C056 277 aaPredicted RBP2.76□□□□□ -1.97
CCDC178-209ENST00000579947 TRBV27A0A0K0K1C4 114 aa2.76□□□□□ -1.97
CCDC178-209ENST00000579947 ADAMTSL4-AS1Q5T5F5 129 aa2.76□□□□□ -1.97
CCDC178-209ENST00000579947 AP3S2P59780 193 aa2.75□□□□□ -1.97
CCDC178-209ENST00000579947 NEDD8Q15843 81 aa2.75□□□□□ -1.97
CCDC178-209ENST00000579947 SCGB1C1Q8TD33 95 aa2.75□□□□□ -1.97
CCDC178-209ENST00000579947 ST20Q9HBF5 79 aa2.75□□□□□ -1.97
CCDC178-209ENST00000579947 POLR2KP53803 58 aaKnown RBP2.75□□□□□ -1.97
CCDC178-209ENST00000579947 HBBP68871 147 aa2.75□□□□□ -1.97
CCDC178-209ENST00000579947 TCEAL7Q9BRU2 100 aa2.75□□□□□ -1.97
CCDC178-209ENST00000579947 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
CCDC178-209ENST00000579947 SMIM29Q86T20 159 aa2.75□□□□□ -1.97
CCDC178-209ENST00000579947 IFITM10A6NMD0 228 aa2.74□□□□□ -1.97
CCDC178-209ENST00000579947 MRPS36P82909 103 aaKnown RBP2.74□□□□□ -1.97
CCDC178-209ENST00000579947 KRTAP19-8Q3LI54 63 aa2.74□□□□□ -1.97
CCDC178-209ENST00000579947 Q1RN00 199 aa2.74□□□□□ -1.97
CCDC178-209ENST00000579947 OCR1Q9BZK8 76 aa2.74□□□□□ -1.97
CCDC178-209ENST00000579947 DHRS4-AS1Q9P1J3 65 aa2.74□□□□□ -1.97
CCDC178-209ENST00000579947 HRES1P13985 223 aa2.73□□□□□ -1.97
CCDC178-209ENST00000579947 FAM240AA0A1B0GVK7 77 aa2.73□□□□□ -1.97
CCDC178-209ENST00000579947 CXCL5P42830 114 aa2.73□□□□□ -1.97
CCDC178-209ENST00000579947 CD164Q04900 197 aa2.73□□□□□ -1.97
CCDC178-209ENST00000579947 HRCT1Q6UXD1 115 aa2.73□□□□□ -1.97
CCDC178-209ENST00000579947 LOC107984156A0A0G2JMH3 177 aa2.72□□□□□ -1.97
CCDC178-209ENST00000579947 AKR1C3P42330 323 aa2.72□□□□□ -1.97
CCDC178-209ENST00000579947 ARL17AQ8IVW1 177 aa2.72□□□□□ -1.97
CCDC178-209ENST00000579947 TOMM5Q8N4H5 51 aa2.72□□□□□ -1.97
CCDC178-209ENST00000579947 CNFNQ9BYD5 112 aa2.72□□□□□ -1.97
CCDC178-209ENST00000579947 TOMM7Q9P0U1 55 aa2.72□□□□□ -1.97
CCDC178-209ENST00000579947 IGLV4-3A0A075B6K6 122 aa2.72□□□□□ -1.97
CCDC178-209ENST00000579947 INMT-MINDY4F8WBC2 141 aa2.72□□□□□ -1.97
CCDC178-209ENST00000579947 RAB5AP20339 215 aa2.72□□□□□ -1.97
CCDC178-209ENST00000579947 FCER1GP30273 86 aa2.72□□□□□ -1.97
CCDC178-209ENST00000579947 MED9Q9NWA0 146 aa2.72□□□□□ -1.97
CCDC178-209ENST00000579947 SPRR1AP35321 89 aa2.72□□□□□ -1.97
CCDC178-209ENST00000579947 CEBPGP53567 150 aa2.72□□□□□ -1.97
CCDC178-209ENST00000579947 C4orf26Q17RF5 130 aa2.72□□□□□ -1.97
CCDC178-209ENST00000579947 SPANXA1Q9NS26 97 aa2.72□□□□□ -1.97
CCDC178-209ENST00000579947 RGS5O15539 181 aa2.71□□□□□ -1.98
CCDC178-209ENST00000579947 TINCRA0A1B0GVN0 87 aa2.71□□□□□ -1.98
CCDC178-209ENST00000579947 DEFA1P59665 94 aa2.71□□□□□ -1.98
CCDC178-209ENST00000579947 TWIST1Q15672 202 aa2.71□□□□□ -1.98
CCDC178-209ENST00000579947 KRTAP19-4Q3LI73 84 aa2.71□□□□□ -1.98
CCDC178-209ENST00000579947 PDZD11Q5EBL8 140 aa2.71□□□□□ -1.98
CCDC178-209ENST00000579947 KRTAP15-1Q3LI76 137 aa2.7□□□□□ -1.98
CCDC178-209ENST00000579947 HSPB11Q9Y547 144 aa2.7□□□□□ -1.98
CCDC178-209ENST00000579947 GATCO43716 136 aaKnown RBP2.69□□□□□ -1.98
CCDC178-209ENST00000579947 ERC2-IT1O76042 136 aa2.69□□□□□ -1.98
CCDC178-209ENST00000579947 BAGE2Q86Y30 109 aa2.69□□□□□ -1.98
CCDC178-209ENST00000579947 C9orf62Q8N4C0 152 aa2.69□□□□□ -1.98
CCDC178-209ENST00000579947 STOML3Q8TAV4 291 aa2.69□□□□□ -1.98
CCDC178-209ENST00000579947 SIX6O95475 246 aa2.69□□□□□ -1.98
CCDC178-209ENST00000579947 SMIM15Q7Z3B0 74 aa2.69□□□□□ -1.98
CCDC178-209ENST00000579947 MT4P47944 62 aa2.69□□□□□ -1.98
CCDC178-209ENST00000579947 NOTCH2NLQ7Z3S9 236 aa2.69□□□□□ -1.98
CCDC178-209ENST00000579947 LOC105371267A0A1B0GV96 52 aa2.68□□□□□ -1.98
CCDC178-209ENST00000579947 HIST1H4GQ99525 98 aa2.68□□□□□ -1.98
CCDC178-209ENST00000579947 ETDCA0A1B0GVM5 59 aa2.67□□□□□ -1.98
CCDC178-209ENST00000579947 RAB14P61106 215 aa2.67□□□□□ -1.98
CCDC178-209ENST00000579947 CXCL6P80162 114 aa2.67□□□□□ -1.98
CCDC178-209ENST00000579947 Q8NDZ9 215 aa2.67□□□□□ -1.98
CCDC178-209ENST00000579947 OBSCN-AS1Q96MR7 158 aa2.67□□□□□ -1.98
CCDC178-209ENST00000579947 PSMG3Q9BT73 122 aaPredicted RBP2.67□□□□□ -1.98
CCDC178-209ENST00000579947 TRAV9-1A0A075B6T8 112 aa2.66□□□□□ -1.98
CCDC178-209ENST00000579947 SMIM26A0A096LP01 95 aa2.66□□□□□ -1.98
CCDC178-209ENST00000579947 NAP1L6A6NFF2 107 aa2.66□□□□□ -1.98
CCDC178-209ENST00000579947 PFN2P35080 140 aa2.66□□□□□ -1.98
CCDC178-209ENST00000579947 RPL39P62891 51 aaKnown RBP2.66□□□□□ -1.98
CCDC178-209ENST00000579947 SMIM3Q9BZL3 60 aa2.66□□□□□ -1.98
CCDC178-209ENST00000579947 A8MUU9 505 aa2.66□□□□□ -1.98
CCDC178-209ENST00000579947 ATP6V0CP27449 155 aa2.66□□□□□ -1.98
CCDC178-209ENST00000579947 MAP1LC3AQ9H492 121 aa2.66□□□□□ -1.98
CCDC178-209ENST00000579947 CCDC160A6NGH7 325 aa2.65□□□□□ -1.98
CCDC178-209ENST00000579947 A8MWL6 223 aa2.65□□□□□ -1.98
CCDC178-209ENST00000579947 KCNQ1DNQ9H478 68 aa2.65□□□□□ -1.98
CCDC178-209ENST00000579947 TCAPO15273 167 aa2.65□□□□□ -1.99
CCDC178-209ENST00000579947 RAB5BP61020 215 aa2.65□□□□□ -1.99
CCDC178-209ENST00000579947 ALKAL2Q6UX46 152 aa2.65□□□□□ -1.99
CCDC178-209ENST00000579947 SEC22CQ9BRL7 303 aa2.65□□□□□ -1.99
CCDC178-209ENST00000579947 SND1-IT1Q9HBX3 110 aa2.65□□□□□ -1.99
CCDC178-209ENST00000579947 TNFSF18Q9UNG2 199 aa2.65□□□□□ -1.99
CCDC178-209ENST00000579947 CTXND1A0A1B0GTU2 59 aa2.64□□□□□ -1.99
CCDC178-209ENST00000579947 A6NDN8 102 aa2.64□□□□□ -1.99
CCDC178-209ENST00000579947 H7C2G1 150 aa2.64□□□□□ -1.99
CCDC178-209ENST00000579947 SERF2P84101 59 aa2.64□□□□□ -1.99
CCDC178-209ENST00000579947 ENKURQ8TC29 256 aa2.64□□□□□ -1.99
CCDC178-209ENST00000579947 TEX43Q6ZNM6 134 aa2.64□□□□□ -1.99
CCDC178-209ENST00000579947 Q9BRP9 147 aa2.64□□□□□ -1.99
CCDC178-209ENST00000579947 EIF5A2Q9GZV4 153 aaKnown RBP2.63□□□□□ -1.99
CCDC178-209ENST00000579947 GIPP09681 153 aaPredicted RBP2.63□□□□□ -1.99
CCDC178-209ENST00000579947 PCP2Q8IVA1 136 aa2.63□□□□□ -1.99
CCDC178-209ENST00000579947 LITAFQ99732 161 aa2.63□□□□□ -1.99
CCDC178-209ENST00000579947 IMUPQ9GZP8 106 aa2.63□□□□□ -1.99
CCDC178-209ENST00000579947 SNAPINO95295 136 aa2.62□□□□□ -1.99
CCDC178-209ENST00000579947 PPP1R17O96001 155 aa2.62□□□□□ -1.99
CCDC178-209ENST00000579947 SPRR1BP22528 89 aa2.62□□□□□ -1.99
CCDC178-209ENST00000579947 PYDC2Q56P42 97 aa2.62□□□□□ -1.99
CCDC178-209ENST00000579947 COMMD7Q86VX2 200 aa2.62□□□□□ -1.99
CCDC178-209ENST00000579947 SPRR2GQ9BYE4 73 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms