RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 VPREB1P12018 145 aa7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 PRLHP81277 87 aa7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 RPL24P83731 157 aaKnown RBP7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 FABP9Q0Z7S8 132 aa7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 COX19Q49B96 90 aa7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 C4orf48Q5BLP8 95 aa7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 UQCC3Q6UW78 93 aa7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 SND1-IT1Q9HBX3 110 aa7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 ERG28Q9UKR5 140 aa7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 IGLV5-39A0A0G2JS06 123 aa7.37□□□□□ -1.23
CDK5RAP3-213ENST00000579605 TMEM238C9JI98 176 aa7.37□□□□□ -1.23
CDK5RAP3-213ENST00000579605 SPAG11AQ6PDA7 123 aa7.37□□□□□ -1.23
CDK5RAP3-213ENST00000579605 TMEM126AQ9H061 195 aa7.37□□□□□ -1.23
CDK5RAP3-213ENST00000579605 ZNF22P17026 224 aaPredicted RBP7.36□□□□□ -1.23
CDK5RAP3-213ENST00000579605 SSPOA2VEC9 5147 aa7.35□□□□□ -1.23
CDK5RAP3-213ENST00000579605 COX17Q14061 63 aa7.35□□□□□ -1.23
CDK5RAP3-213ENST00000579605 CBLN2Q8IUK8 224 aa7.35□□□□□ -1.23
CDK5RAP3-213ENST00000579605 ZNF625Q96I27 306 aaPredicted RBP7.35□□□□□ -1.23
CDK5RAP3-213ENST00000579605 M0R378 163 aa7.34□□□□□ -1.23
CDK5RAP3-213ENST00000579605 SEC11CQ9BY50 192 aa7.34□□□□□ -1.23
CDK5RAP3-213ENST00000579605 SFTA2Q6UW10 78 aa7.33□□□□□ -1.24
CDK5RAP3-213ENST00000579605 DAND5Q8N907 189 aa7.33□□□□□ -1.24
CDK5RAP3-213ENST00000579605 PLEKHB2Q96CS7 222 aa7.33□□□□□ -1.24
CDK5RAP3-213ENST00000579605 USH2AO75445 5202 aa7.32□□□□□ -1.24
CDK5RAP3-213ENST00000579605 HBDP02042 147 aa7.32□□□□□ -1.24
CDK5RAP3-213ENST00000579605 LINC00614P0C842 121 aa7.32□□□□□ -1.24
CDK5RAP3-213ENST00000579605 TMEM170BQ5T4T1 132 aa7.32□□□□□ -1.24
CDK5RAP3-213ENST00000579605 HIGD2AQ9BW72 106 aa7.32□□□□□ -1.24
CDK5RAP3-213ENST00000579605 A0A096LNJ9 63 aa7.31□□□□□ -1.24
CDK5RAP3-213ENST00000579605 BAGE3Q86Y29 109 aa7.31□□□□□ -1.24
CDK5RAP3-213ENST00000579605 Q8NDZ9 215 aa7.31□□□□□ -1.24
CDK5RAP3-213ENST00000579605 C11orf86A6NJI1 115 aa7.3□□□□□ -1.24
CDK5RAP3-213ENST00000579605 LINC00158P58513 81 aa7.3□□□□□ -1.24
CDK5RAP3-213ENST00000579605 PMCHL1Q16048 86 aa7.3□□□□□ -1.24
CDK5RAP3-213ENST00000579605 XP32Q5T750 250 aa7.3□□□□□ -1.24
CDK5RAP3-213ENST00000579605 RPS10P5Q9NQ39 176 aa7.3□□□□□ -1.24
CDK5RAP3-213ENST00000579605 IGLV8-61A0A075B6I0 122 aa7.29□□□□□ -1.24
CDK5RAP3-213ENST00000579605 C18orf32Q8TCD1 76 aa7.29□□□□□ -1.24
CDK5RAP3-213ENST00000579605 URB1-AS1Q96HZ7 61 aa7.29□□□□□ -1.24
CDK5RAP3-213ENST00000579605 TRAPPC1Q9Y5R8 145 aa7.29□□□□□ -1.24
CDK5RAP3-213ENST00000579605 A0A0U1RRA0 63 aa7.28□□□□□ -1.24
CDK5RAP3-213ENST00000579605 RHEBQ15382 184 aa7.28□□□□□ -1.24
CDK5RAP3-213ENST00000579605 Q8NBF4 154 aa7.28□□□□□ -1.24
CDK5RAP3-213ENST00000579605 SPRR4Q96PI1 79 aa7.28□□□□□ -1.24
CDK5RAP3-213ENST00000579605 ZNF706Q9Y5V0 76 aaPredicted RBP7.28□□□□□ -1.24
CDK5RAP3-213ENST00000579605 PCOTHQ58A44 107 aa7.27□□□□□ -1.25
CDK5RAP3-213ENST00000579605 COMMD7Q86VX2 200 aa7.27□□□□□ -1.25
CDK5RAP3-213ENST00000579605 NDUFA12Q9UI09 145 aa7.27□□□□□ -1.25
CDK5RAP3-213ENST00000579605 CHTOPQ9Y3Y2 248 aaKnown RBP7.27□□□□□ -1.25
CDK5RAP3-213ENST00000579605 ATP6V1G1O75348 118 aa7.26□□□□□ -1.25
CDK5RAP3-213ENST00000579605 IFITM2Q01629 132 aa7.26□□□□□ -1.25
CDK5RAP3-213ENST00000579605 FCGBPQ9Y6R7 5405 aaPredicted RBP7.25□□□□□ -1.25
CDK5RAP3-213ENST00000579605 TMEM223A0PJW6 202 aa7.24□□□□□ -1.25
CDK5RAP3-213ENST00000579605 PRYO14603 147 aa7.24□□□□□ -1.25
CDK5RAP3-213ENST00000579605 C10orf91Q5T1B1 145 aa7.24□□□□□ -1.25
CDK5RAP3-213ENST00000579605 NCR3O14931 201 aa7.23□□□□□ -1.25
CDK5RAP3-213ENST00000579605 SPINK1P00995 79 aa7.23□□□□□ -1.25
CDK5RAP3-213ENST00000579605 SMIM13P0DJ93 91 aa7.23□□□□□ -1.25
CDK5RAP3-213ENST00000579605 MEIG1Q5JSS6 88 aa7.23□□□□□ -1.25
CDK5RAP3-213ENST00000579605 BOD1L2Q8IYS8 172 aa7.23□□□□□ -1.25
CDK5RAP3-213ENST00000579605 SMCR5Q8TEV8 140 aa7.23□□□□□ -1.25
CDK5RAP3-213ENST00000579605 ETDCA0A1B0GVM5 59 aa7.22□□□□□ -1.25
CDK5RAP3-213ENST00000579605 TRAV12-1A0A0B4J245 112 aa7.21□□□□□ -1.26
CDK5RAP3-213ENST00000579605 COX6B2Q6YFQ2 88 aa7.21□□□□□ -1.26
CDK5RAP3-213ENST00000579605 MIR7-3HGQ8N6C7 128 aa7.21□□□□□ -1.26
CDK5RAP3-213ENST00000579605 IFI27L1Q96BM0 104 aa7.21□□□□□ -1.26
CDK5RAP3-213ENST00000579605 KCNQ1DNQ9H478 68 aa7.21□□□□□ -1.26
CDK5RAP3-213ENST00000579605 FLGP20930 4061 aaPredicted RBP7.21□□□□□ -1.26
CDK5RAP3-213ENST00000579605 LINC00587B1AMM8 73 aa7.2□□□□□ -1.26
CDK5RAP3-213ENST00000579605 SPRR1AP35321 89 aa7.2□□□□□ -1.26
CDK5RAP3-213ENST00000579605 HERV-K104P63124 156 aa7.2□□□□□ -1.26
CDK5RAP3-213ENST00000579605 S100A12P80511 92 aa7.2□□□□□ -1.26
CDK5RAP3-213ENST00000579605 Q8N377 158 aa7.19□□□□□ -1.26
CDK5RAP3-213ENST00000579605 CHCHD1Q96BP2 118 aaKnown RBP7.19□□□□□ -1.26
CDK5RAP3-213ENST00000579605 TRBV10-3A0A0K0K1G6 114 aa7.18□□□□□ -1.26
CDK5RAP3-213ENST00000579605 MAP1LC3CQ9BXW4 147 aa7.18□□□□□ -1.26
CDK5RAP3-213ENST00000579605 MYMXA0A1B0GTQ4 84 aa7.17□□□□□ -1.26
CDK5RAP3-213ENST00000579605 KRTAP4-16G5E9R7 235 aaPredicted RBP7.17□□□□□ -1.26
CDK5RAP3-213ENST00000579605 LINC00483Q53H64 154 aa7.17□□□□□ -1.26
CDK5RAP3-213ENST00000579605 GAGE2AQ6NT46 116 aa7.17□□□□□ -1.26
CDK5RAP3-213ENST00000579605 FAM19A2Q8N3H0 131 aa7.17□□□□□ -1.26
CDK5RAP3-213ENST00000579605 APOC3P02656 99 aa7.16□□□□□ -1.26
CDK5RAP3-213ENST00000579605 IGLV9-49A0A0B4J1Y8 123 aa7.15□□□□□ -1.26
CDK5RAP3-213ENST00000579605 B5MCH6 92 aa7.15□□□□□ -1.26
CDK5RAP3-213ENST00000579605 SLC25A20O43772 301 aa7.15□□□□□ -1.26
CDK5RAP3-213ENST00000579605 SNAPINO95295 136 aa7.15□□□□□ -1.26
CDK5RAP3-213ENST00000579605 MOBPQ13875 183 aa7.15□□□□□ -1.26
CDK5RAP3-213ENST00000579605 NDUFA5Q16718 116 aa7.15□□□□□ -1.26
CDK5RAP3-213ENST00000579605 HSBP1O75506 76 aa7.14□□□□□ -1.27
CDK5RAP3-213ENST00000579605 SSBP3-AS1Q7Z2R9 100 aa7.14□□□□□ -1.27
CDK5RAP3-213ENST00000579605 SVBPQ8N300 66 aa7.14□□□□□ -1.27
CDK5RAP3-213ENST00000579605 H0Y8G0 127 aa7.13□□□□□ -1.27
CDK5RAP3-213ENST00000579605 ERC2-IT1O76042 136 aa7.13□□□□□ -1.27
CDK5RAP3-213ENST00000579605 DDTP30046 118 aa7.13□□□□□ -1.27
CDK5RAP3-213ENST00000579605 C9orf92A6NGG3 77 aa7.12□□□□□ -1.27
CDK5RAP3-213ENST00000579605 LEPROTO15243 131 aa7.12□□□□□ -1.27
CDK5RAP3-213ENST00000579605 RPS29P62273 56 aaKnown RBP7.12□□□□□ -1.27
CDK5RAP3-213ENST00000579605 TRBV10-2A0A0K0K1G8 114 aa7.11□□□□□ -1.27
CDK5RAP3-213ENST00000579605 MIEN1Q9BRT3 115 aa7.11□□□□□ -1.27
CDK5RAP3-213ENST00000579605 LOC107984156A0A0G2JMH3 177 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms