RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 CHTOPQ9Y3Y2 248 aaKnown RBP6.8□□□□□ -1.32
SSH2-208ENST00000579040 TRAV12-1A0A0B4J245 112 aa6.79□□□□□ -1.32
SSH2-208ENST00000579040 TMEM126AQ9H061 195 aa6.79□□□□□ -1.32
SSH2-208ENST00000579040 TSPAN13O95857 204 aa6.78□□□□□ -1.32
SSH2-208ENST00000579040 IFI27L1Q96BM0 104 aa6.78□□□□□ -1.32
SSH2-208ENST00000579040 YPEL4Q96NS1 127 aa6.78□□□□□ -1.32
SSH2-208ENST00000579040 TMEM223A0PJW6 202 aa6.77□□□□□ -1.33
SSH2-208ENST00000579040 PRLHP81277 87 aa6.77□□□□□ -1.33
SSH2-208ENST00000579040 KRTAP13-2Q52LG2 175 aa6.77□□□□□ -1.33
SSH2-208ENST00000579040 FAM19A1Q7Z5A9 133 aa6.77□□□□□ -1.33
SSH2-208ENST00000579040 ANAPC11Q9NYG5 84 aa6.77□□□□□ -1.33
SSH2-208ENST00000579040 RNF213Q63HN8 5207 aa6.77□□□□□ -1.33
SSH2-208ENST00000579040 TMEM238C9JI98 176 aa6.76□□□□□ -1.33
SSH2-208ENST00000579040 M0R378 163 aa6.76□□□□□ -1.33
SSH2-208ENST00000579040 LINC00158P58513 81 aa6.76□□□□□ -1.33
SSH2-208ENST00000579040 Q8NDZ9 215 aa6.76□□□□□ -1.33
SSH2-208ENST00000579040 CTAG1AP78358 180 aa6.75□□□□□ -1.33
SSH2-208ENST00000579040 IGKV2D-26A0A0A0MRZ7 120 aa6.74□□□□□ -1.33
SSH2-208ENST00000579040 HERV-K104P63124 156 aa6.74□□□□□ -1.33
SSH2-208ENST00000579040 LINC00304Q8N9R0 145 aa6.74□□□□□ -1.33
SSH2-208ENST00000579040 LINC00587B1AMM8 73 aa6.73□□□□□ -1.33
SSH2-208ENST00000579040 HSBP1O75506 76 aa6.73□□□□□ -1.33
SSH2-208ENST00000579040 CBLN2Q8IUK8 224 aa6.73□□□□□ -1.33
SSH2-208ENST00000579040 PLEKHB2Q96CS7 222 aa6.73□□□□□ -1.33
SSH2-208ENST00000579040 LPAP08519 4548 aa6.72□□□□□ -1.33
SSH2-208ENST00000579040 MEIG1Q5JSS6 88 aa6.72□□□□□ -1.33
SSH2-208ENST00000579040 A0A0U1RRA0 63 aa6.71□□□□□ -1.34
SSH2-208ENST00000579040 PRYO14603 147 aa6.71□□□□□ -1.34
SSH2-208ENST00000579040 SMIM13P0DJ93 91 aa6.71□□□□□ -1.34
SSH2-208ENST00000579040 BOD1L2Q8IYS8 172 aa6.71□□□□□ -1.34
SSH2-208ENST00000579040 FAM19A2Q8N3H0 131 aa6.71□□□□□ -1.34
SSH2-208ENST00000579040 HIGD2AQ9BW72 106 aa6.71□□□□□ -1.34
SSH2-208ENST00000579040 NDUFA12Q9UI09 145 aa6.71□□□□□ -1.34
SSH2-208ENST00000579040 MYMXA0A1B0GTQ4 84 aa6.7□□□□□ -1.34
SSH2-208ENST00000579040 MIR7-3HGQ8N6C7 128 aa6.7□□□□□ -1.34
SSH2-208ENST00000579040 MAP1LC3CQ9BXW4 147 aa6.7□□□□□ -1.34
SSH2-208ENST00000579040 SPRR4Q96PI1 79 aa6.69□□□□□ -1.34
SSH2-208ENST00000579040 ZNF706Q9Y5V0 76 aaPredicted RBP6.69□□□□□ -1.34
SSH2-208ENST00000579040 LEPROTL1O95214 131 aa6.68□□□□□ -1.34
SSH2-208ENST00000579040 TRGC2P03986 189 aa6.68□□□□□ -1.34
SSH2-208ENST00000579040 PLNP26678 52 aa6.68□□□□□ -1.34
SSH2-208ENST00000579040 SPRR1AP35321 89 aa6.68□□□□□ -1.34
SSH2-208ENST00000579040 LINC00337Q8N6G1 96 aa6.68□□□□□ -1.34
SSH2-208ENST00000579040 KCNQ1DNQ9H478 68 aa6.68□□□□□ -1.34
SSH2-208ENST00000579040 H0Y8G0 127 aa6.67□□□□□ -1.34
SSH2-208ENST00000579040 NCR3O14931 201 aa6.67□□□□□ -1.34
SSH2-208ENST00000579040 LEPROTO15243 131 aa6.67□□□□□ -1.34
SSH2-208ENST00000579040 SERF1AO75920 110 aa6.67□□□□□ -1.34
SSH2-208ENST00000579040 SPAG11AQ6PDA7 123 aa6.67□□□□□ -1.34
SSH2-208ENST00000579040 C3orf22Q8N5N4 141 aa6.67□□□□□ -1.34
SSH2-208ENST00000579040 RETNLBQ9BQ08 111 aa6.67□□□□□ -1.34
SSH2-208ENST00000579040 LOC107984156A0A0G2JMH3 177 aa6.66□□□□□ -1.34
SSH2-208ENST00000579040 A0A0U1RQV1 116 aa6.66□□□□□ -1.34
SSH2-208ENST00000579040 LINC00310P59036 64 aa6.66□□□□□ -1.34
SSH2-208ENST00000579040 S100A12P80511 92 aa6.66□□□□□ -1.34
SSH2-208ENST00000579040 TPRXLQ17RH7 258 aa6.66□□□□□ -1.34
SSH2-208ENST00000579040 ARL17AQ8IVW1 177 aa6.66□□□□□ -1.34
SSH2-208ENST00000579040 HSPB8Q9UJY1 196 aa6.66□□□□□ -1.34
SSH2-208ENST00000579040 TRBV10-3A0A0K0K1G6 114 aa6.65□□□□□ -1.34
SSH2-208ENST00000579040 ETDCA0A1B0GVM5 59 aa6.65□□□□□ -1.34
SSH2-208ENST00000579040 KRTAP4-16G5E9R7 235 aaPredicted RBP6.65□□□□□ -1.34
SSH2-208ENST00000579040 NMUP48645 174 aa6.65□□□□□ -1.34
SSH2-208ENST00000579040 TSPEAR-AS2P59090 65 aa6.65□□□□□ -1.34
SSH2-208ENST00000579040 HERVK_113P61574 105 aa6.65□□□□□ -1.34
SSH2-208ENST00000579040 IGLV7-46A0A075B6I9 117 aa6.64□□□□□ -1.35
SSH2-208ENST00000579040 TRBV10-2A0A0K0K1G8 114 aa6.64□□□□□ -1.35
SSH2-208ENST00000579040 J3QQQ9 107 aa6.64□□□□□ -1.35
SSH2-208ENST00000579040 DPM2O94777 84 aa6.64□□□□□ -1.35
SSH2-208ENST00000579040 SMCR5Q8TEV8 140 aa6.63□□□□□ -1.35
SSH2-208ENST00000579040 IGKCP01834 107 aa6.62□□□□□ -1.35
SSH2-208ENST00000579040 FABP4P15090 132 aa6.62□□□□□ -1.35
SSH2-208ENST00000579040 LGALS3P17931 250 aaKnown RBP6.62□□□□□ -1.35
SSH2-208ENST00000579040 C4orf48Q5BLP8 95 aa6.62□□□□□ -1.35
SSH2-208ENST00000579040 MIEN1Q9BRT3 115 aa6.62□□□□□ -1.35
SSH2-208ENST00000579040 SPANXB1Q9NS25 103 aaPredicted RBP6.62□□□□□ -1.35
SSH2-208ENST00000579040 NDUFC2O95298 119 aa6.61□□□□□ -1.35
SSH2-208ENST00000579040 DDTP30046 118 aa6.61□□□□□ -1.35
SSH2-208ENST00000579040 LINC00483Q53H64 154 aa6.61□□□□□ -1.35
SSH2-208ENST00000579040 DAND5Q8N907 189 aa6.61□□□□□ -1.35
SSH2-208ENST00000579040 CDIP1Q9H305 208 aa6.61□□□□□ -1.35
SSH2-208ENST00000579040 COLCA2A8K830 154 aa6.6□□□□□ -1.35
SSH2-208ENST00000579040 B5MCH6 92 aa6.6□□□□□ -1.35
SSH2-208ENST00000579040 FP248Q71RG6 208 aaPredicted RBP6.6□□□□□ -1.35
SSH2-208ENST00000579040 Q8NBF4 154 aa6.6□□□□□ -1.35
SSH2-208ENST00000579040 TMA7Q9Y2S6 64 aaKnown RBP6.6□□□□□ -1.35
SSH2-208ENST00000579040 Q6ZRX8 168 aa6.59□□□□□ -1.35
SSH2-208ENST00000579040 PMCHL2Q9BQD1 86 aa6.59□□□□□ -1.35
SSH2-208ENST00000579040 PPDPFQ9H3Y8 114 aa6.59□□□□□ -1.35
SSH2-208ENST00000579040 SPINK1P00995 79 aa6.58□□□□□ -1.36
SSH2-208ENST00000579040 IGLV6-57P01721 117 aa6.58□□□□□ -1.36
SSH2-208ENST00000579040 S100A7L2Q5SY68 101 aa6.58□□□□□ -1.36
SSH2-208ENST00000579040 E9PLD3 99 aa6.57□□□□□ -1.36
SSH2-208ENST00000579040 GAGE2AQ6NT46 116 aa6.57□□□□□ -1.36
SSH2-208ENST00000579040 Q9BRP9 147 aa6.57□□□□□ -1.36
SSH2-208ENST00000579040 A0A0J9YXY3 114 aa6.56□□□□□ -1.36
SSH2-208ENST00000579040 ERC2-IT1O76042 136 aa6.56□□□□□ -1.36
SSH2-208ENST00000579040 JOSD1Q15040 202 aaPredicted RBP6.56□□□□□ -1.36
SSH2-208ENST00000579040 SSBP3-AS1Q7Z2R9 100 aa6.56□□□□□ -1.36
SSH2-208ENST00000579040 CBY1Q9Y3M2 126 aa6.56□□□□□ -1.36
SSH2-208ENST00000579040 TRAV23DV6A0A075B6W5 121 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms