RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 HERV-K104P63124 156 aa4.01□□□□□ -1.77
TRAF4-213ENST00000578917 HIST2H2BEQ16778 126 aa4.01□□□□□ -1.77
TRAF4-213ENST00000578917 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.01□□□□□ -1.77
TRAF4-213ENST00000578917 KRTAP11-1Q8IUC1 163 aa4.01□□□□□ -1.77
TRAF4-213ENST00000578917 HIST1H2BHQ93079 126 aa4.01□□□□□ -1.77
TRAF4-213ENST00000578917 PLEKHB2Q96CS7 222 aa4.01□□□□□ -1.77
TRAF4-213ENST00000578917 HIST1H2BNQ99877 126 aa4.01□□□□□ -1.77
TRAF4-213ENST00000578917 HIST1H2BMQ99879 126 aa4.01□□□□□ -1.77
TRAF4-213ENST00000578917 NDUFA12Q9UI09 145 aa4.01□□□□□ -1.77
TRAF4-213ENST00000578917 PLA2G2DQ9UNK4 145 aa4.01□□□□□ -1.77
TRAF4-213ENST00000578917 IGKV2-28A0A075B6P5 120 aa4□□□□□ -1.77
TRAF4-213ENST00000578917 H0Y9J4 135 aa4□□□□□ -1.77
TRAF4-213ENST00000578917 LEPROTO15243 131 aa4□□□□□ -1.77
TRAF4-213ENST00000578917 IGKV2D-28P01615 120 aa4□□□□□ -1.77
TRAF4-213ENST00000578917 SMIM13P0DJ93 91 aa4□□□□□ -1.77
TRAF4-213ENST00000578917 RPL28P46779 137 aaKnown RBP4□□□□□ -1.77
TRAF4-213ENST00000578917 UBE2AP49459 152 aa4□□□□□ -1.77
TRAF4-213ENST00000578917 LINC00310P59036 64 aa4□□□□□ -1.77
TRAF4-213ENST00000578917 SYS1-DBNDD2H3BUS1 97 aa3.99□□□□□ -1.77
TRAF4-213ENST00000578917 J3QQQ9 107 aa3.99□□□□□ -1.77
TRAF4-213ENST00000578917 ZNF861PO60384 105 aa3.99□□□□□ -1.77
TRAF4-213ENST00000578917 BCE1O60756 84 aa3.99□□□□□ -1.77
TRAF4-213ENST00000578917 MT1HL1P0DM35 61 aa3.99□□□□□ -1.77
TRAF4-213ENST00000578917 BOD1L2Q8IYS8 172 aa3.99□□□□□ -1.77
TRAF4-213ENST00000578917 LRP1Q07954 4544 aaKnown RBP3.99□□□□□ -1.77
TRAF4-213ENST00000578917 IGLV5-37A0A075B6J1 123 aa3.98□□□□□ -1.77
TRAF4-213ENST00000578917 M0R378 163 aa3.98□□□□□ -1.77
TRAF4-213ENST00000578917 VPREB1P12018 145 aa3.98□□□□□ -1.77
TRAF4-213ENST00000578917 S100A1P23297 94 aa3.98□□□□□ -1.77
TRAF4-213ENST00000578917 KRTDAPP60985 99 aa3.98□□□□□ -1.77
TRAF4-213ENST00000578917 S100A12P80511 92 aa3.98□□□□□ -1.77
TRAF4-213ENST00000578917 MIR7-3HGQ8N6C7 128 aa3.98□□□□□ -1.77
TRAF4-213ENST00000578917 PRR26Q8N8Z3 221 aa3.98□□□□□ -1.77
TRAF4-213ENST00000578917 MIEN1Q9BRT3 115 aa3.98□□□□□ -1.77
TRAF4-213ENST00000578917 IGLV1-50A0A075B6I6 118 aa3.97□□□□□ -1.77
TRAF4-213ENST00000578917 NMUP48645 174 aa3.97□□□□□ -1.77
TRAF4-213ENST00000578917 KRTAP10-8P60410 259 aa3.97□□□□□ -1.77
TRAF4-213ENST00000578917 PET117Q6UWS5 81 aa3.97□□□□□ -1.77
TRAF4-213ENST00000578917 FAM19A1Q7Z5A9 133 aa3.97□□□□□ -1.77
TRAF4-213ENST00000578917 C20orf202A1L168 122 aa3.96□□□□□ -1.78
TRAF4-213ENST00000578917 TMEM238C9JI98 176 aa3.96□□□□□ -1.78
TRAF4-213ENST00000578917 NCR3O14931 201 aa3.96□□□□□ -1.78
TRAF4-213ENST00000578917 RPL13AP40429 203 aaKnown RBP3.96□□□□□ -1.78
TRAF4-213ENST00000578917 TSPEAR-AS2P59090 65 aa3.96□□□□□ -1.78
TRAF4-213ENST00000578917 DAND5Q8N907 189 aa3.96□□□□□ -1.78
TRAF4-213ENST00000578917 TMEM126AQ9H061 195 aa3.96□□□□□ -1.78
TRAF4-213ENST00000578917 E9PLD3 99 aa3.95□□□□□ -1.78
TRAF4-213ENST00000578917 C3orf79P0CE67 100 aa3.95□□□□□ -1.78
TRAF4-213ENST00000578917 S100A2P29034 98 aa3.95□□□□□ -1.78
TRAF4-213ENST00000578917 IGKV2D-26A0A0A0MRZ7 120 aa3.94□□□□□ -1.78
TRAF4-213ENST00000578917 ETDCA0A1B0GVM5 59 aa3.94□□□□□ -1.78
TRAF4-213ENST00000578917 S100A6P06703 90 aa3.94□□□□□ -1.78
TRAF4-213ENST00000578917 CRYGAP11844 174 aa3.94□□□□□ -1.78
TRAF4-213ENST00000578917 PRLHP81277 87 aa3.94□□□□□ -1.78
TRAF4-213ENST00000578917 COA6Q5JTJ3 125 aaKnown RBP3.94□□□□□ -1.78
TRAF4-213ENST00000578917 S100A7L2Q5SY68 101 aa3.94□□□□□ -1.78
TRAF4-213ENST00000578917 LINC01545Q5VT33 79 aa3.94□□□□□ -1.78
TRAF4-213ENST00000578917 Q8NDZ9 215 aa3.94□□□□□ -1.78
TRAF4-213ENST00000578917 HIGD2AQ9BW72 106 aa3.94□□□□□ -1.78
TRAF4-213ENST00000578917 A0A0J9YXY3 114 aa3.93□□□□□ -1.78
TRAF4-213ENST00000578917 ZNF815PA8K554 130 aa3.93□□□□□ -1.78
TRAF4-213ENST00000578917 AKR1D1P51857 326 aa3.93□□□□□ -1.78
TRAF4-213ENST00000578917 NPC2P61916 151 aa3.93□□□□□ -1.78
TRAF4-213ENST00000578917 SCGB1D4Q6XE38 83 aa3.93□□□□□ -1.78
TRAF4-213ENST00000578917 ANAPC11Q9NYG5 84 aa3.93□□□□□ -1.78
TRAF4-213ENST00000578917 TRBV10-3A0A0K0K1G6 114 aa3.92□□□□□ -1.78
TRAF4-213ENST00000578917 PRYO14603 147 aa3.92□□□□□ -1.78
TRAF4-213ENST00000578917 KRTAP1-4P0C5Y4 121 aa3.92□□□□□ -1.78
TRAF4-213ENST00000578917 DDTP30046 118 aa3.92□□□□□ -1.78
TRAF4-213ENST00000578917 ATOH7Q8N100 152 aa3.92□□□□□ -1.78
TRAF4-213ENST00000578917 OR13C6PQ8NH95 151 aa3.92□□□□□ -1.78
TRAF4-213ENST00000578917 TYMSOSQ8TAI1 123 aa3.92□□□□□ -1.78
TRAF4-213ENST00000578917 FAT3Q8TDW7 4589 aa3.91□□□□□ -1.78
TRAF4-213ENST00000578917 TRBV10-2A0A0K0K1G8 114 aa3.91□□□□□ -1.78
TRAF4-213ENST00000578917 HSBP1L1C9JCN9 74 aa3.91□□□□□ -1.78
TRAF4-213ENST00000578917 TSPAN13O95857 204 aa3.91□□□□□ -1.78
TRAF4-213ENST00000578917 HINT1P49773 126 aaPredicted RBP3.91□□□□□ -1.78
TRAF4-213ENST00000578917 ADAMTSL4-AS1Q5T5F5 129 aa3.91□□□□□ -1.78
TRAF4-213ENST00000578917 KCNQ1DNQ9H478 68 aa3.91□□□□□ -1.78
TRAF4-213ENST00000578917 SPANXB1Q9NS25 103 aaPredicted RBP3.91□□□□□ -1.78
TRAF4-213ENST00000578917 CBY1Q9Y3M2 126 aa3.91□□□□□ -1.78
TRAF4-213ENST00000578917 LOC107984156A0A0G2JMH3 177 aa3.9□□□□□ -1.79
TRAF4-213ENST00000578917 NDUFC2O95298 119 aa3.9□□□□□ -1.79
TRAF4-213ENST00000578917 KRTAP13-1Q8IUC0 172 aa3.9□□□□□ -1.79
TRAF4-213ENST00000578917 ARL17AQ8IVW1 177 aa3.9□□□□□ -1.79
TRAF4-213ENST00000578917 COPS9Q8WXC6 57 aa3.9□□□□□ -1.79
TRAF4-213ENST00000578917 TTTY13Q9BZ97 58 aa3.9□□□□□ -1.79
TRAF4-213ENST00000578917 ZNF706Q9Y5V0 76 aaPredicted RBP3.9□□□□□ -1.79
TRAF4-213ENST00000578917 HMCN2Q8NDA2 5059 aa3.9□□□□□ -1.79
TRAF4-213ENST00000578917 PKHD1L1Q86WI1 4243 aa3.9□□□□□ -1.79
TRAF4-213ENST00000578917 A0A087X002 238 aa3.89□□□□□ -1.79
TRAF4-213ENST00000578917 TIMM17BO60830 172 aa3.89□□□□□ -1.79
TRAF4-213ENST00000578917 SNRPEP62304 92 aaKnown RBP3.89□□□□□ -1.79
TRAF4-213ENST00000578917 JOSD1Q15040 202 aaPredicted RBP3.89□□□□□ -1.79
TRAF4-213ENST00000578917 PRR4Q16378 134 aa3.89□□□□□ -1.79
TRAF4-213ENST00000578917 FAM229BQ4G0N7 80 aa3.89□□□□□ -1.79
TRAF4-213ENST00000578917 HIST3H2BBQ8N257 126 aa3.89□□□□□ -1.79
TRAF4-213ENST00000578917 LINC00337Q8N6G1 96 aa3.89□□□□□ -1.79
TRAF4-213ENST00000578917 LINC00308Q8TCZ7 52 aa3.89□□□□□ -1.79
TRAF4-213ENST00000578917 SMCR5Q8TEV8 140 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms