RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 GNB1LQ9BYB4 327 aa11.95□□□□□ -0.5
TSEN54-205ENST00000578415 IGLV5-39A0A0G2JS06 123 aa11.94□□□□□ -0.5
TSEN54-205ENST00000578415 COLCA2A8K830 154 aa11.94□□□□□ -0.5
TSEN54-205ENST00000578415 LINC01549A6NIU2 74 aa11.93□□□□□ -0.5
TSEN54-205ENST00000578415 H3BRM9 83 aa11.93□□□□□ -0.5
TSEN54-205ENST00000578415 FABP9Q0Z7S8 132 aa11.93□□□□□ -0.5
TSEN54-205ENST00000578415 TRAPPC1Q9Y5R8 145 aa11.93□□□□□ -0.5
TSEN54-205ENST00000578415 SPAG11AQ6PDA7 123 aa11.92□□□□□ -0.5
TSEN54-205ENST00000578415 ERG28Q9UKR5 140 aa11.92□□□□□ -0.5
TSEN54-205ENST00000578415 RPL24P83731 157 aaKnown RBP11.91□□□□□ -0.5
TSEN54-205ENST00000578415 FP248Q71RG6 208 aaPredicted RBP11.91□□□□□ -0.5
TSEN54-205ENST00000578415 HIGD2AQ9BW72 106 aa11.91□□□□□ -0.5
TSEN54-205ENST00000578415 IGLC3P0DOY3 106 aa11.89□□□□□ -0.51
TSEN54-205ENST00000578415 KRTAP13-3Q3SY46 172 aa11.89□□□□□ -0.51
TSEN54-205ENST00000578415 SPRR4Q96PI1 79 aa11.89□□□□□ -0.51
TSEN54-205ENST00000578415 COX17Q14061 63 aa11.88□□□□□ -0.51
TSEN54-205ENST00000578415 ASB16-AS1Q495Z4 193 aa11.88□□□□□ -0.51
TSEN54-205ENST00000578415 ZNF22P17026 224 aaPredicted RBP11.87□□□□□ -0.51
TSEN54-205ENST00000578415 ZNF625Q96I27 306 aaPredicted RBP11.87□□□□□ -0.51
TSEN54-205ENST00000578415 KRTAP4-1Q9BYQ7 146 aa11.87□□□□□ -0.51
TSEN54-205ENST00000578415 TRGC2P03986 189 aa11.86□□□□□ -0.51
TSEN54-205ENST00000578415 LINC00337Q8N6G1 96 aa11.86□□□□□ -0.51
TSEN54-205ENST00000578415 LINC01547P58512 204 aaPredicted RBP11.83□□□□□ -0.52
TSEN54-205ENST00000578415 C4orf48Q5BLP8 95 aa11.83□□□□□ -0.52
TSEN54-205ENST00000578415 LCE2DQ5TA82 110 aaPredicted RBP11.83□□□□□ -0.52
TSEN54-205ENST00000578415 FA2HQ7L5A8 372 aa11.83□□□□□ -0.52
TSEN54-205ENST00000578415 DAND5Q8N907 189 aa11.83□□□□□ -0.52
TSEN54-205ENST00000578415 Q8NBF4 154 aa11.83□□□□□ -0.52
TSEN54-205ENST00000578415 A0A096LNJ9 63 aa11.81□□□□□ -0.52
TSEN54-205ENST00000578415 NDUFA6P56556 154 aa11.81□□□□□ -0.52
TSEN54-205ENST00000578415 ZNF706Q9Y5V0 76 aaPredicted RBP11.8□□□□□ -0.52
TSEN54-205ENST00000578415 C11orf86A6NJI1 115 aa11.77□□□□□ -0.53
TSEN54-205ENST00000578415 SFTA2Q6UW10 78 aa11.77□□□□□ -0.53
TSEN54-205ENST00000578415 SPINK1P00995 79 aa11.76□□□□□ -0.53
TSEN54-205ENST00000578415 LINC00158P58513 81 aa11.75□□□□□ -0.53
TSEN54-205ENST00000578415 SEC61BP60468 96 aaKnown RBP11.75□□□□□ -0.53
TSEN54-205ENST00000578415 C18orf32Q8TCD1 76 aa11.75□□□□□ -0.53
TSEN54-205ENST00000578415 PRYO14603 147 aa11.74□□□□□ -0.53
TSEN54-205ENST00000578415 TMEM170BQ5T4T1 132 aa11.74□□□□□ -0.53
TSEN54-205ENST00000578415 URB1-AS1Q96HZ7 61 aa11.74□□□□□ -0.53
TSEN54-205ENST00000578415 A0A0U1RRA0 63 aa11.73□□□□□ -0.53
TSEN54-205ENST00000578415 SPRR1AP35321 89 aa11.73□□□□□ -0.53
TSEN54-205ENST00000578415 SMCR5Q8TEV8 140 aa11.73□□□□□ -0.53
TSEN54-205ENST00000578415 KRTAP4-16G5E9R7 235 aaPredicted RBP11.72□□□□□ -0.53
TSEN54-205ENST00000578415 BAGE3Q86Y29 109 aa11.72□□□□□ -0.53
TSEN54-205ENST00000578415 CRCT1Q9UGL9 99 aa11.72□□□□□ -0.53
TSEN54-205ENST00000578415 PMCHL1Q16048 86 aa11.71□□□□□ -0.53
TSEN54-205ENST00000578415 LINC00483Q53H64 154 aa11.71□□□□□ -0.53
TSEN54-205ENST00000578415 HIST1H2BKO60814 126 aa11.7□□□□□ -0.54
TSEN54-205ENST00000578415 HBDP02042 147 aa11.7□□□□□ -0.54
TSEN54-205ENST00000578415 HIST1H2BJP06899 126 aa11.7□□□□□ -0.54
TSEN54-205ENST00000578415 HIST1H2BOP23527 126 aa11.7□□□□□ -0.54
TSEN54-205ENST00000578415 HIST1H2BBP33778 126 aa11.7□□□□□ -0.54
TSEN54-205ENST00000578415 HIST1H2BDP58876 126 aa11.7□□□□□ -0.54
TSEN54-205ENST00000578415 HIST1H2BCP62807 126 aa11.7□□□□□ -0.54
TSEN54-205ENST00000578415 HIST2H2BEQ16778 126 aa11.7□□□□□ -0.54
TSEN54-205ENST00000578415 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.7□□□□□ -0.54
TSEN54-205ENST00000578415 HIST1H2BHQ93079 126 aa11.7□□□□□ -0.54
TSEN54-205ENST00000578415 HIST1H2BNQ99877 126 aa11.7□□□□□ -0.54
TSEN54-205ENST00000578415 HIST1H2BMQ99879 126 aa11.7□□□□□ -0.54
TSEN54-205ENST00000578415 KCNQ1DNQ9H478 68 aa11.7□□□□□ -0.54
TSEN54-205ENST00000578415 Q8N377 158 aa11.69□□□□□ -0.54
TSEN54-205ENST00000578415 NCR3O14931 201 aa11.68□□□□□ -0.54
TSEN54-205ENST00000578415 LINC00614P0C842 121 aa11.68□□□□□ -0.54
TSEN54-205ENST00000578415 BOD1L2Q8IYS8 172 aa11.68□□□□□ -0.54
TSEN54-205ENST00000578415 FSIP2Q5CZC0 6907 aa11.67□□□□□ -0.54
TSEN54-205ENST00000578415 ETDCA0A1B0GVM5 59 aa11.66□□□□□ -0.54
TSEN54-205ENST00000578415 SMIM13P0DJ93 91 aa11.66□□□□□ -0.54
TSEN54-205ENST00000578415 RPS29P62273 56 aaKnown RBP11.66□□□□□ -0.54
TSEN54-205ENST00000578415 MOBPQ13875 183 aa11.66□□□□□ -0.54
TSEN54-205ENST00000578415 GAGE2AQ6NT46 116 aa11.66□□□□□ -0.54
TSEN54-205ENST00000578415 NDUFA12Q9UI09 145 aa11.66□□□□□ -0.54
TSEN54-205ENST00000578415 XP32Q5T750 250 aa11.65□□□□□ -0.54
TSEN54-205ENST00000578415 LCE2CQ5TA81 110 aa11.65□□□□□ -0.54
TSEN54-205ENST00000578415 TRBV10-3A0A0K0K1G6 114 aa11.64□□□□□ -0.55
TSEN54-205ENST00000578415 TMEM223A0PJW6 202 aa11.64□□□□□ -0.55
TSEN54-205ENST00000578415 SERF1AO75920 110 aa11.64□□□□□ -0.55
TSEN54-205ENST00000578415 CHCHD1Q96BP2 118 aaKnown RBP11.64□□□□□ -0.55
TSEN54-205ENST00000578415 IGLV9-49A0A0B4J1Y8 123 aa11.63□□□□□ -0.55
TSEN54-205ENST00000578415 ERC2-IT1O76042 136 aa11.63□□□□□ -0.55
TSEN54-205ENST00000578415 FAM19A2Q8N3H0 131 aa11.63□□□□□ -0.55
TSEN54-205ENST00000578415 MIR7-3HGQ8N6C7 128 aa11.63□□□□□ -0.55
TSEN54-205ENST00000578415 CHTOPQ9Y3Y2 248 aaKnown RBP11.63□□□□□ -0.55
TSEN54-205ENST00000578415 HSBP1O75506 76 aa11.62□□□□□ -0.55
TSEN54-205ENST00000578415 SSBP3-AS1Q7Z2R9 100 aa11.62□□□□□ -0.55
TSEN54-205ENST00000578415 B5MCH6 92 aa11.6□□□□□ -0.55
TSEN54-205ENST00000578415 SLC25A20O43772 301 aa11.6□□□□□ -0.55
TSEN54-205ENST00000578415 LINC00310P59036 64 aa11.6□□□□□ -0.55
TSEN54-205ENST00000578415 MEIG1Q5JSS6 88 aa11.6□□□□□ -0.55
TSEN54-205ENST00000578415 KRTAP19-2Q3LHN2 52 aa11.59□□□□□ -0.55
TSEN54-205ENST00000578415 TMA7Q9Y2S6 64 aaKnown RBP11.59□□□□□ -0.55
TSEN54-205ENST00000578415 S100A6P06703 90 aa11.58□□□□□ -0.56
TSEN54-205ENST00000578415 COA6Q5JTJ3 125 aaKnown RBP11.57□□□□□ -0.56
TSEN54-205ENST00000578415 Q9BRP9 147 aa11.57□□□□□ -0.56
TSEN54-205ENST00000578415 HERV-K104P63124 156 aa11.56□□□□□ -0.56
TSEN54-205ENST00000578415 TRAV12-1A0A0B4J245 112 aa11.55□□□□□ -0.56
TSEN54-205ENST00000578415 FABP4P15090 132 aa11.52□□□□□ -0.57
TSEN54-205ENST00000578415 SNRPEP62304 92 aaKnown RBP11.52□□□□□ -0.57
TSEN54-205ENST00000578415 MT1HP80294 61 aa11.52□□□□□ -0.57
TSEN54-205ENST00000578415 S100A12P80511 92 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms