RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 CAMK2N2Q96S95 79 aa5.2□□□□□ -1.58
COPS3-215ENST00000578317 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.19□□□□□ -1.58
COPS3-215ENST00000578317 ZNF815PA8K554 130 aa5.19□□□□□ -1.58
COPS3-215ENST00000578317 COX17Q14061 63 aa5.19□□□□□ -1.58
COPS3-215ENST00000578317 SLC25A34Q6PIV7 304 aa5.19□□□□□ -1.58
COPS3-215ENST00000578317 Q6ZRU5 148 aa5.19□□□□□ -1.58
COPS3-215ENST00000578317 C9orf163Q8N9P6 203 aa5.19□□□□□ -1.58
COPS3-215ENST00000578317 C14orf144Q96I85 54 aa5.19□□□□□ -1.58
COPS3-215ENST00000578317 DYNC1H1Q14204 4646 aaKnown RBP5.18□□□□□ -1.58
COPS3-215ENST00000578317 LRP1BQ9NZR2 4599 aa5.18□□□□□ -1.58
COPS3-215ENST00000578317 A0A0J9YXY3 114 aa5.18□□□□□ -1.58
COPS3-215ENST00000578317 TIMM17BO60830 172 aa5.18□□□□□ -1.58
COPS3-215ENST00000578317 TLX1NBP0CAT3 122 aa5.18□□□□□ -1.58
COPS3-215ENST00000578317 CARD19Q96LW7 228 aa5.18□□□□□ -1.58
COPS3-215ENST00000578317 TTTY13Q9BZ97 58 aa5.18□□□□□ -1.58
COPS3-215ENST00000578317 C6orf48Q9UBA6 75 aa5.18□□□□□ -1.58
COPS3-215ENST00000578317 PKHD1P08F94 4074 aa5.18□□□□□ -1.58
COPS3-215ENST00000578317 CIRBPQ14011 172 aaKnown RBP5.17□□□□□ -1.58
COPS3-215ENST00000578317 PRR26Q8N8Z3 221 aa5.17□□□□□ -1.58
COPS3-215ENST00000578317 NDUFC2-KCTD14E9PQ53 114 aa5.16□□□□□ -1.58
COPS3-215ENST00000578317 Q6ZVH6 145 aa5.16□□□□□ -1.58
COPS3-215ENST00000578317 MIEN1Q9BRT3 115 aa5.16□□□□□ -1.58
COPS3-215ENST00000578317 HIGD1BQ9P298 99 aa5.16□□□□□ -1.58
COPS3-215ENST00000578317 UQCR10Q9UDW1 63 aa5.16□□□□□ -1.58
COPS3-215ENST00000578317 ERG28Q9UKR5 140 aa5.16□□□□□ -1.58
COPS3-215ENST00000578317 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.15□□□□□ -1.58
COPS3-215ENST00000578317 SCGB1D4Q6XE38 83 aa5.15□□□□□ -1.58
COPS3-215ENST00000578317 LITAFQ99732 161 aa5.15□□□□□ -1.58
COPS3-215ENST00000578317 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.58
COPS3-215ENST00000578317 PKIGQ9Y2B9 76 aa5.15□□□□□ -1.58
COPS3-215ENST00000578317 EPPK1P58107 5090 aaKnown RBP5.15□□□□□ -1.58
COPS3-215ENST00000578317 LOC107984156A0A0G2JMH3 177 aa5.15□□□□□ -1.59
COPS3-215ENST00000578317 SMIM13P0DJ93 91 aa5.15□□□□□ -1.59
COPS3-215ENST00000578317 C9orf116Q5BN46 136 aaPredicted RBP5.15□□□□□ -1.59
COPS3-215ENST00000578317 SDIM1Q6ZPB5 146 aa5.15□□□□□ -1.59
COPS3-215ENST00000578317 ARL17AQ8IVW1 177 aa5.15□□□□□ -1.59
COPS3-215ENST00000578317 PPDPFQ9H3Y8 114 aa5.15□□□□□ -1.59
COPS3-215ENST00000578317 SPANXB1Q9NS25 103 aaPredicted RBP5.15□□□□□ -1.59
COPS3-215ENST00000578317 IGLV5-52A0A0A0MRZ9 124 aa5.14□□□□□ -1.59
COPS3-215ENST00000578317 LOC107984640A0A0U1RRK4 108 aa5.14□□□□□ -1.59
COPS3-215ENST00000578317 A0A1B0GVY2 172 aa5.14□□□□□ -1.59
COPS3-215ENST00000578317 TMEM238C9JI98 176 aa5.14□□□□□ -1.59
COPS3-215ENST00000578317 TSTD3H0UI37 97 aa5.14□□□□□ -1.59
COPS3-215ENST00000578317 LINC00158P58513 81 aa5.14□□□□□ -1.59
COPS3-215ENST00000578317 LBHQ53QV2 105 aaPredicted RBP5.14□□□□□ -1.59
COPS3-215ENST00000578317 MEIG1Q5JSS6 88 aa5.14□□□□□ -1.59
COPS3-215ENST00000578317 ADAMTSL4-AS1Q5T5F5 129 aa5.14□□□□□ -1.59
COPS3-215ENST00000578317 Q6ZRP5 223 aa5.14□□□□□ -1.59
COPS3-215ENST00000578317 C2orf91Q6ZV80 131 aa5.14□□□□□ -1.59
COPS3-215ENST00000578317 SPANXDQ9BXN6 97 aa5.14□□□□□ -1.59
COPS3-215ENST00000578317 SPANXCQ9NY87 97 aa5.14□□□□□ -1.59
COPS3-215ENST00000578317 C16orf90A8MZG2 172 aa5.13□□□□□ -1.59
COPS3-215ENST00000578317 IFITM1P13164 125 aa5.13□□□□□ -1.59
COPS3-215ENST00000578317 PFN2P35080 140 aa5.13□□□□□ -1.59
COPS3-215ENST00000578317 PRO1933Q9H354 126 aa5.13□□□□□ -1.59
COPS3-215ENST00000578317 MIR7-3HGQ8N6C7 128 aa5.12□□□□□ -1.59
COPS3-215ENST00000578317 COPS9Q8WXC6 57 aa5.12□□□□□ -1.59
COPS3-215ENST00000578317 LINC00474Q9P2X8 69 aa5.12□□□□□ -1.59
COPS3-215ENST00000578317 TP73-AS1Q9UF72 201 aa5.12□□□□□ -1.59
COPS3-215ENST00000578317 SRSF9Q13242 221 aaKnown RBP eCLIP5.12□□□□□ -1.59
COPS3-215ENST00000578317 TAL2Q16559 108 aa5.12□□□□□ -1.59
COPS3-215ENST00000578317 SND1-IT1Q9HBX3 110 aa5.12□□□□□ -1.59
COPS3-215ENST00000578317 A0A0U1RRA0 63 aa5.11□□□□□ -1.59
COPS3-215ENST00000578317 LINC00308Q8TCZ7 52 aa5.11□□□□□ -1.59
COPS3-215ENST00000578317 IGLV5-37A0A075B6J1 123 aa5.1□□□□□ -1.59
COPS3-215ENST00000578317 HNRNPA3P51991 378 aaKnown RBP5.1□□□□□ -1.59
COPS3-215ENST00000578317 DAND5Q8N907 189 aa5.1□□□□□ -1.59
COPS3-215ENST00000578317 HIST1H4GQ99525 98 aa5.1□□□□□ -1.59
COPS3-215ENST00000578317 APOBP04114 4563 aaKnown RBP5.09□□□□□ -1.59
COPS3-215ENST00000578317 EPM2AB3EWF7 344 aa5.09□□□□□ -1.59
COPS3-215ENST00000578317 NDUFC2O95298 119 aa5.09□□□□□ -1.59
COPS3-215ENST00000578317 RPL18AQ02543 176 aaKnown RBP5.09□□□□□ -1.59
COPS3-215ENST00000578317 LINC01620Q4KN68 170 aa5.09□□□□□ -1.59
COPS3-215ENST00000578317 C9orf129Q5T035 196 aaKnown RBP5.09□□□□□ -1.59
COPS3-215ENST00000578317 SOSTDC1Q6X4U4 206 aa5.09□□□□□ -1.59
COPS3-215ENST00000578317 MUSTN1Q8IVN3 82 aa5.09□□□□□ -1.59
COPS3-215ENST00000578317 A0A096LNI7 61 aa5.08□□□□□ -1.6
COPS3-215ENST00000578317 DDTP30046 118 aa5.08□□□□□ -1.6
COPS3-215ENST00000578317 FUSP35637 526 aaKnown RBP eCLIP5.08□□□□□ -1.6
COPS3-215ENST00000578317 HSD52Q0P140 79 aa5.08□□□□□ -1.6
COPS3-215ENST00000578317 Q6ZSA8 131 aa5.08□□□□□ -1.6
COPS3-215ENST00000578317 XAGE1AQ9HD64 81 aa5.08□□□□□ -1.6
COPS3-215ENST00000578317 RPL24P83731 157 aaKnown RBP5.08□□□□□ -1.6
COPS3-215ENST00000578317 CEND1Q8N111 149 aa5.08□□□□□ -1.6
COPS3-215ENST00000578317 SPACA4Q8TDM5 124 aa5.08□□□□□ -1.6
COPS3-215ENST00000578317 KRTAP10-1P60331 282 aa5.07□□□□□ -1.6
COPS3-215ENST00000578317 CTAG1AP78358 180 aa5.07□□□□□ -1.6
COPS3-215ENST00000578317 KRTAP4-2Q9BYR5 136 aa5.07□□□□□ -1.6
COPS3-215ENST00000578317 IGKV2-24A0A0C4DH68 120 aa5.06□□□□□ -1.6
COPS3-215ENST00000578317 TRBV10-2A0A0K0K1G8 114 aa5.06□□□□□ -1.6
COPS3-215ENST00000578317 A0A1W2PNN7 141 aa5.06□□□□□ -1.6
COPS3-215ENST00000578317 PANO1I0J062 215 aa5.06□□□□□ -1.6
COPS3-215ENST00000578317 KRTAP7-1Q8IUC3 87 aa5.06□□□□□ -1.6
COPS3-215ENST00000578317 PLAC8Q9NZF1 115 aa5.06□□□□□ -1.6
COPS3-215ENST00000578317 CHTF8P0CG12 524 aa5.05□□□□□ -1.6
COPS3-215ENST00000578317 NPC2P61916 151 aa5.05□□□□□ -1.6
COPS3-215ENST00000578317 Q8NDZ9 215 aa5.05□□□□□ -1.6
COPS3-215ENST00000578317 A0A087WYN8 130 aa5.05□□□□□ -1.6
COPS3-215ENST00000578317 M0R143 59 aa5.05□□□□□ -1.6
COPS3-215ENST00000578317 BVES-AS1Q5T3Y7 98 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms