RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 NDUFA12Q9UI09 145 aa13.59□□□□□ -0.23
SMARCD2-206ENST00000577990 LINC00158P58513 81 aa13.58□□□□□ -0.24
SMARCD2-206ENST00000577990 HERV-K104P63124 156 aa13.58□□□□□ -0.24
SMARCD2-206ENST00000577990 PLEKHB2Q96CS7 222 aa13.58□□□□□ -0.24
SMARCD2-206ENST00000577990 TSPEAR-AS2P59090 65 aa13.57□□□□□ -0.24
SMARCD2-206ENST00000577990 NKAPP1Q8N9T2 125 aa13.57□□□□□ -0.24
SMARCD2-206ENST00000577990 MYMXA0A1B0GTQ4 84 aa13.56□□□□□ -0.24
SMARCD2-206ENST00000577990 MEIG1Q5JSS6 88 aa13.56□□□□□ -0.24
SMARCD2-206ENST00000577990 REG3GQ6UW15 175 aa13.56□□□□□ -0.24
SMARCD2-206ENST00000577990 A0A0U1RRA0 63 aa13.55□□□□□ -0.24
SMARCD2-206ENST00000577990 LINC00167Q96N53 147 aa13.55□□□□□ -0.24
SMARCD2-206ENST00000577990 J3QQQ9 107 aa13.54□□□□□ -0.24
SMARCD2-206ENST00000577990 SMIM13P0DJ93 91 aa13.54□□□□□ -0.24
SMARCD2-206ENST00000577990 PET117Q6UWS5 81 aa13.54□□□□□ -0.24
SMARCD2-206ENST00000577990 GAGE10A6NGK3 116 aa13.53□□□□□ -0.24
SMARCD2-206ENST00000577990 MT1HL1P0DM35 61 aa13.53□□□□□ -0.24
SMARCD2-206ENST00000577990 VPREB1P12018 145 aa13.53□□□□□ -0.24
SMARCD2-206ENST00000577990 LINC01545Q5VT33 79 aa13.53□□□□□ -0.24
SMARCD2-206ENST00000577990 LINC00587B1AMM8 73 aa13.52□□□□□ -0.25
SMARCD2-206ENST00000577990 RPL24P83731 157 aaKnown RBP13.52□□□□□ -0.25
SMARCD2-206ENST00000577990 TNXBP22105 4242 aa13.51□□□□□ -0.25
SMARCD2-206ENST00000577990 RPL37AP8A6NKH3 93 aa13.51□□□□□ -0.25
SMARCD2-206ENST00000577990 C3orf79P0CE67 100 aa13.51□□□□□ -0.25
SMARCD2-206ENST00000577990 LGALS3P17931 250 aaKnown RBP13.51□□□□□ -0.25
SMARCD2-206ENST00000577990 DIRC1Q969H9 104 aa13.51□□□□□ -0.25
SMARCD2-206ENST00000577990 LINC01600Q96MT4 127 aa13.51□□□□□ -0.25
SMARCD2-206ENST00000577990 NMUP48645 174 aa13.5□□□□□ -0.25
SMARCD2-206ENST00000577990 MIR7-3HGQ8N6C7 128 aa13.49□□□□□ -0.25
SMARCD2-206ENST00000577990 Q8NDZ9 215 aa13.49□□□□□ -0.25
SMARCD2-206ENST00000577990 E9PLD3 99 aa13.48□□□□□ -0.25
SMARCD2-206ENST00000577990 KRTDAPP60985 99 aa13.48□□□□□ -0.25
SMARCD2-206ENST00000577990 UBR4Q5T4S7 5183 aa13.48□□□□□ -0.25
SMARCD2-206ENST00000577990 H0Y9J4 135 aa13.47□□□□□ -0.25
SMARCD2-206ENST00000577990 BCE1O60756 84 aa13.46□□□□□ -0.25
SMARCD2-206ENST00000577990 IGKV2-28A0A075B6P5 120 aa13.44□□□□□ -0.26
SMARCD2-206ENST00000577990 ZNF861PO60384 105 aa13.44□□□□□ -0.26
SMARCD2-206ENST00000577990 IGKV2D-28P01615 120 aa13.44□□□□□ -0.26
SMARCD2-206ENST00000577990 BOD1L2Q8IYS8 172 aa13.43□□□□□ -0.26
SMARCD2-206ENST00000577990 IGLV1-50A0A075B6I6 118 aa13.42□□□□□ -0.26
SMARCD2-206ENST00000577990 C20orf202A1L168 122 aa13.42□□□□□ -0.26
SMARCD2-206ENST00000577990 RPL28P46779 137 aaKnown RBP13.4□□□□□ -0.26
SMARCD2-206ENST00000577990 DAND5Q8N907 189 aa13.4□□□□□ -0.26
SMARCD2-206ENST00000577990 M0R378 163 aa13.39□□□□□ -0.27
SMARCD2-206ENST00000577990 HIST3H2BBQ8N257 126 aa13.39□□□□□ -0.27
SMARCD2-206ENST00000577990 A0A0J9YXY3 114 aa13.38□□□□□ -0.27
SMARCD2-206ENST00000577990 KRTAP10-8P60410 259 aa13.38□□□□□ -0.27
SMARCD2-206ENST00000577990 LOC107984156A0A0G2JMH3 177 aa13.37□□□□□ -0.27
SMARCD2-206ENST00000577990 ARL17AQ8IVW1 177 aa13.37□□□□□ -0.27
SMARCD2-206ENST00000577990 TMEM238C9JI98 176 aa13.36□□□□□ -0.27
SMARCD2-206ENST00000577990 NCR3O14931 201 aa13.36□□□□□ -0.27
SMARCD2-206ENST00000577990 S100A2P29034 98 aa13.36□□□□□ -0.27
SMARCD2-206ENST00000577990 UBE2AP49459 152 aa13.36□□□□□ -0.27
SMARCD2-206ENST00000577990 TMEM126AQ9H061 195 aa13.36□□□□□ -0.27
SMARCD2-206ENST00000577990 IGKV2D-26A0A0A0MRZ7 120 aa13.35□□□□□ -0.27
SMARCD2-206ENST00000577990 S100A6P06703 90 aa13.35□□□□□ -0.27
SMARCD2-206ENST00000577990 KRTAP1-4P0C5Y4 121 aa13.35□□□□□ -0.27
SMARCD2-206ENST00000577990 KRTAP13-1Q8IUC0 172 aa13.35□□□□□ -0.27
SMARCD2-206ENST00000577990 AKR1D1P51857 326 aa13.34□□□□□ -0.27
SMARCD2-206ENST00000577990 HIST1H2BLQ99880 126 aa13.34□□□□□ -0.27
SMARCD2-206ENST00000577990 MIEN1Q9BRT3 115 aa13.34□□□□□ -0.27
SMARCD2-206ENST00000577990 ZNF815PA8K554 130 aa13.32□□□□□ -0.28
SMARCD2-206ENST00000577990 FAM19A1Q7Z5A9 133 aa13.32□□□□□ -0.28
SMARCD2-206ENST00000577990 ATOH7Q8N100 152 aa13.32□□□□□ -0.28
SMARCD2-206ENST00000577990 ADAMTSL4-AS1Q5T5F5 129 aa13.31□□□□□ -0.28
SMARCD2-206ENST00000577990 PRR26Q8N8Z3 221 aa13.31□□□□□ -0.28
SMARCD2-206ENST00000577990 TTTY13Q9BZ97 58 aa13.3□□□□□ -0.28
SMARCD2-206ENST00000577990 PRYO14603 147 aa13.29□□□□□ -0.28
SMARCD2-206ENST00000577990 TIMM17BO60830 172 aa13.29□□□□□ -0.28
SMARCD2-206ENST00000577990 PRLHP81277 87 aa13.29□□□□□ -0.28
SMARCD2-206ENST00000577990 ANKRD39Q53RE8 183 aa13.29□□□□□ -0.28
SMARCD2-206ENST00000577990 NPC2P61916 151 aa13.28□□□□□ -0.28
SMARCD2-206ENST00000577990 SOSTDC1Q6X4U4 206 aa13.28□□□□□ -0.28
SMARCD2-206ENST00000577990 LITAFQ99732 161 aa13.28□□□□□ -0.28
SMARCD2-206ENST00000577990 SPANXB1Q9NS25 103 aaPredicted RBP13.28□□□□□ -0.28
SMARCD2-206ENST00000577990 TRBV10-3A0A0K0K1G6 114 aa13.27□□□□□ -0.29
SMARCD2-206ENST00000577990 TRBV10-2A0A0K0K1G8 114 aa13.27□□□□□ -0.29
SMARCD2-206ENST00000577990 NDUFC2O95298 119 aa13.27□□□□□ -0.29
SMARCD2-206ENST00000577990 SNRPEP62304 92 aaKnown RBP13.26□□□□□ -0.29
SMARCD2-206ENST00000577990 KCNQ1DNQ9H478 68 aa13.26□□□□□ -0.29
SMARCD2-206ENST00000577990 EIF4EBP3O60516 100 aaPredicted RBP13.25□□□□□ -0.29
SMARCD2-206ENST00000577990 LRP2P98164 4655 aa13.24□□□□□ -0.29
SMARCD2-206ENST00000577990 DDTP30046 118 aa13.23□□□□□ -0.29
SMARCD2-206ENST00000577990 S100A12P80511 92 aa13.23□□□□□ -0.29
SMARCD2-206ENST00000577990 LINC00308Q8TCZ7 52 aa13.23□□□□□ -0.29
SMARCD2-206ENST00000577990 SPRR1AP35321 89 aa13.22□□□□□ -0.29
SMARCD2-206ENST00000577990 RPL13AP40429 203 aaKnown RBP13.22□□□□□ -0.29
SMARCD2-206ENST00000577990 SCGB1D4Q6XE38 83 aa13.22□□□□□ -0.29
SMARCD2-206ENST00000577990 C5orf52A6NGY3 159 aa13.21□□□□□ -0.29
SMARCD2-206ENST00000577990 LINC00337Q8N6G1 96 aa13.21□□□□□ -0.29
SMARCD2-206ENST00000577990 S100A7L2Q5SY68 101 aa13.19□□□□□ -0.3
SMARCD2-206ENST00000577990 PCP2Q8IVA1 136 aa13.19□□□□□ -0.3
SMARCD2-206ENST00000577990 HIGD2AQ9BW72 106 aa13.19□□□□□ -0.3
SMARCD2-206ENST00000577990 SPANXCQ9NY87 97 aa13.19□□□□□ -0.3
SMARCD2-206ENST00000577990 ETDCA0A1B0GVM5 59 aa13.18□□□□□ -0.3
SMARCD2-206ENST00000577990 KRTAP4-16G5E9R7 235 aaPredicted RBP13.18□□□□□ -0.3
SMARCD2-206ENST00000577990 IGLV6-57P01721 117 aa13.18□□□□□ -0.3
SMARCD2-206ENST00000577990 SPANXDQ9BXN6 97 aa13.17□□□□□ -0.3
SMARCD2-206ENST00000577990 HSBP1L1C9JCN9 74 aa13.16□□□□□ -0.3
SMARCD2-206ENST00000577990 CRYGAP11844 174 aa13.16□□□□□ -0.3
SMARCD2-206ENST00000577990 A0A087X002 238 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms