RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 LINC00304Q8N9R0 145 aa8.72□□□□□ -1.01
RN7SL560P-201ENST00000577943 SNAPINO95295 136 aa8.71□□□□□ -1.02
RN7SL560P-201ENST00000577943 NDUFA5Q16718 116 aa8.71□□□□□ -1.02
RN7SL560P-201ENST00000577943 Q8NDZ9 215 aa8.71□□□□□ -1.02
RN7SL560P-201ENST00000577943 A0A0U1RRA0 63 aa8.7□□□□□ -1.02
RN7SL560P-201ENST00000577943 CBLN2Q8IUK8 224 aa8.69□□□□□ -1.02
RN7SL560P-201ENST00000577943 SVBPQ8N300 66 aa8.69□□□□□ -1.02
RN7SL560P-201ENST00000577943 RETNLBQ9BQ08 111 aa8.69□□□□□ -1.02
RN7SL560P-201ENST00000577943 MUC2Q02817 5179 aa8.68□□□□□ -1.02
RN7SL560P-201ENST00000577943 TMEM223A0PJW6 202 aa8.68□□□□□ -1.02
RN7SL560P-201ENST00000577943 ATP6V1G1O75348 118 aa8.68□□□□□ -1.02
RN7SL560P-201ENST00000577943 IFI27L1Q96BM0 104 aa8.68□□□□□ -1.02
RN7SL560P-201ENST00000577943 CHCHD1Q96BP2 118 aaKnown RBP8.68□□□□□ -1.02
RN7SL560P-201ENST00000577943 PLEKHB2Q96CS7 222 aa8.68□□□□□ -1.02
RN7SL560P-201ENST00000577943 HIGD2AQ9BW72 106 aa8.68□□□□□ -1.02
RN7SL560P-201ENST00000577943 TRAV12-1A0A0B4J245 112 aa8.67□□□□□ -1.02
RN7SL560P-201ENST00000577943 SLC7A5P1Q8MH63 180 aa8.67□□□□□ -1.02
RN7SL560P-201ENST00000577943 A0A0U1RQV1 116 aa8.66□□□□□ -1.02
RN7SL560P-201ENST00000577943 SMIM13P0DJ93 91 aa8.65□□□□□ -1.02
RN7SL560P-201ENST00000577943 MEIG1Q5JSS6 88 aa8.65□□□□□ -1.02
RN7SL560P-201ENST00000577943 C3orf22Q8N5N4 141 aa8.65□□□□□ -1.02
RN7SL560P-201ENST00000577943 CTAG1AP78358 180 aa8.63□□□□□ -1.03
RN7SL560P-201ENST00000577943 BOD1L2Q8IYS8 172 aa8.63□□□□□ -1.03
RN7SL560P-201ENST00000577943 NCR3O14931 201 aa8.62□□□□□ -1.03
RN7SL560P-201ENST00000577943 HSBP1O75506 76 aa8.62□□□□□ -1.03
RN7SL560P-201ENST00000577943 HERV-K104P63124 156 aa8.62□□□□□ -1.03
RN7SL560P-201ENST00000577943 MIR7-3HGQ8N6C7 128 aa8.62□□□□□ -1.03
RN7SL560P-201ENST00000577943 YPEL4Q96NS1 127 aa8.62□□□□□ -1.03
RN7SL560P-201ENST00000577943 IGLV7-46A0A075B6I9 117 aa8.61□□□□□ -1.03
RN7SL560P-201ENST00000577943 H0Y8G0 127 aa8.61□□□□□ -1.03
RN7SL560P-201ENST00000577943 PRYO14603 147 aa8.61□□□□□ -1.03
RN7SL560P-201ENST00000577943 FAM19A2Q8N3H0 131 aa8.61□□□□□ -1.03
RN7SL560P-201ENST00000577943 SPRR4Q96PI1 79 aa8.61□□□□□ -1.03
RN7SL560P-201ENST00000577943 CDIP1Q9H305 208 aa8.61□□□□□ -1.03
RN7SL560P-201ENST00000577943 NDUFA12Q9UI09 145 aa8.61□□□□□ -1.03
RN7SL560P-201ENST00000577943 ZNF706Q9Y5V0 76 aaPredicted RBP8.61□□□□□ -1.03
RN7SL560P-201ENST00000577943 LINC00587B1AMM8 73 aa8.6□□□□□ -1.03
RN7SL560P-201ENST00000577943 MYMXA0A1B0GTQ4 84 aa8.59□□□□□ -1.03
RN7SL560P-201ENST00000577943 TPRXLQ17RH7 258 aa8.59□□□□□ -1.03
RN7SL560P-201ENST00000577943 SPAG11AQ6PDA7 123 aa8.59□□□□□ -1.03
RN7SL560P-201ENST00000577943 MAP1LC3CQ9BXW4 147 aa8.59□□□□□ -1.03
RN7SL560P-201ENST00000577943 ETDCA0A1B0GVM5 59 aa8.58□□□□□ -1.04
RN7SL560P-201ENST00000577943 LINC00337Q8N6G1 96 aa8.58□□□□□ -1.04
RN7SL560P-201ENST00000577943 KCNQ1DNQ9H478 68 aa8.58□□□□□ -1.04
RN7SL560P-201ENST00000577943 SPRR1AP35321 89 aa8.57□□□□□ -1.04
RN7SL560P-201ENST00000577943 C4orf48Q5BLP8 95 aa8.57□□□□□ -1.04
RN7SL560P-201ENST00000577943 SMCR5Q8TEV8 140 aa8.57□□□□□ -1.04
RN7SL560P-201ENST00000577943 TRBV10-3A0A0K0K1G6 114 aa8.56□□□□□ -1.04
RN7SL560P-201ENST00000577943 S100A12P80511 92 aa8.56□□□□□ -1.04
RN7SL560P-201ENST00000577943 LEPROTL1O95214 131 aa8.55□□□□□ -1.04
RN7SL560P-201ENST00000577943 TRGC2P03986 189 aa8.55□□□□□ -1.04
RN7SL560P-201ENST00000577943 PPDPFQ9H3Y8 114 aa8.55□□□□□ -1.04
RN7SL560P-201ENST00000577943 LEPROTO15243 131 aa8.54□□□□□ -1.04
RN7SL560P-201ENST00000577943 Q8NBF4 154 aa8.54□□□□□ -1.04
RN7SL560P-201ENST00000577943 KRTAP4-16G5E9R7 235 aaPredicted RBP8.53□□□□□ -1.04
RN7SL560P-201ENST00000577943 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
RN7SL560P-201ENST00000577943 DAND5Q8N907 189 aa8.53□□□□□ -1.04
RN7SL560P-201ENST00000577943 SERF1AO75920 110 aa8.52□□□□□ -1.05
RN7SL560P-201ENST00000577943 PLNP26678 52 aa8.52□□□□□ -1.05
RN7SL560P-201ENST00000577943 FAT4Q6V0I7 4981 aa8.52□□□□□ -1.05
RN7SL560P-201ENST00000577943 MUC17Q685J3 4493 aa8.52□□□□□ -1.05
RN7SL560P-201ENST00000577943 LOC107984156A0A0G2JMH3 177 aa8.51□□□□□ -1.05
RN7SL560P-201ENST00000577943 J3QQQ9 107 aa8.51□□□□□ -1.05
RN7SL560P-201ENST00000577943 DDTP30046 118 aa8.51□□□□□ -1.05
RN7SL560P-201ENST00000577943 HERVK_113P61574 105 aa8.51□□□□□ -1.05
RN7SL560P-201ENST00000577943 FP248Q71RG6 208 aaPredicted RBP8.51□□□□□ -1.05
RN7SL560P-201ENST00000577943 ARL17AQ8IVW1 177 aa8.51□□□□□ -1.05
RN7SL560P-201ENST00000577943 HSPB8Q9UJY1 196 aa8.51□□□□□ -1.05
RN7SL560P-201ENST00000577943 B5MCH6 92 aa8.5□□□□□ -1.05
RN7SL560P-201ENST00000577943 DPM2O94777 84 aa8.5□□□□□ -1.05
RN7SL560P-201ENST00000577943 FABP4P15090 132 aa8.5□□□□□ -1.05
RN7SL560P-201ENST00000577943 LINC00310P59036 64 aa8.5□□□□□ -1.05
RN7SL560P-201ENST00000577943 GAGE2AQ6NT46 116 aa8.5□□□□□ -1.05
RN7SL560P-201ENST00000577943 MIEN1Q9BRT3 115 aa8.5□□□□□ -1.05
RN7SL560P-201ENST00000577943 TRBV10-2A0A0K0K1G8 114 aa8.49□□□□□ -1.05
RN7SL560P-201ENST00000577943 LGALS3P17931 250 aaKnown RBP8.49□□□□□ -1.05
RN7SL560P-201ENST00000577943 NMUP48645 174 aa8.49□□□□□ -1.05
RN7SL560P-201ENST00000577943 LINC00483Q53H64 154 aa8.49□□□□□ -1.05
RN7SL560P-201ENST00000577943 PMCHL2Q9BQD1 86 aa8.49□□□□□ -1.05
RN7SL560P-201ENST00000577943 SPINK1P00995 79 aa8.48□□□□□ -1.05
RN7SL560P-201ENST00000577943 IGKCP01834 107 aa8.48□□□□□ -1.05
RN7SL560P-201ENST00000577943 SPANXB1Q9NS25 103 aaPredicted RBP8.48□□□□□ -1.05
RN7SL560P-201ENST00000577943 IGLV9-49A0A0B4J1Y8 123 aa8.47□□□□□ -1.05
RN7SL560P-201ENST00000577943 ERC2-IT1O76042 136 aa8.47□□□□□ -1.05
RN7SL560P-201ENST00000577943 S100A7L2Q5SY68 101 aa8.47□□□□□ -1.05
RN7SL560P-201ENST00000577943 MOBPQ13875 183 aa8.46□□□□□ -1.06
RN7SL560P-201ENST00000577943 Q6ZRX8 168 aa8.46□□□□□ -1.06
RN7SL560P-201ENST00000577943 NDUFC2O95298 119 aa8.45□□□□□ -1.06
RN7SL560P-201ENST00000577943 LCE2AQ5TA79 106 aaPredicted RBP8.45□□□□□ -1.06
RN7SL560P-201ENST00000577943 Q9BRP9 147 aa8.45□□□□□ -1.06
RN7SL560P-201ENST00000577943 NPC2P61916 151 aa8.44□□□□□ -1.06
RN7SL560P-201ENST00000577943 SSBP3-AS1Q7Z2R9 100 aa8.44□□□□□ -1.06
RN7SL560P-201ENST00000577943 IGLV6-57P01721 117 aa8.43□□□□□ -1.06
RN7SL560P-201ENST00000577943 JOSD1Q15040 202 aaPredicted RBP8.43□□□□□ -1.06
RN7SL560P-201ENST00000577943 KRTAP13-3Q3SY46 172 aa8.43□□□□□ -1.06
RN7SL560P-201ENST00000577943 TRAV23DV6A0A075B6W5 121 aa8.42□□□□□ -1.06
RN7SL560P-201ENST00000577943 A0A0J9YXY3 114 aa8.41□□□□□ -1.06
RN7SL560P-201ENST00000577943 S100A1P23297 94 aa8.41□□□□□ -1.06
RN7SL560P-201ENST00000577943 SOSTDC1Q6X4U4 206 aa8.41□□□□□ -1.06
RN7SL560P-201ENST00000577943 COLCA2A8K830 154 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms