RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 G0S2P27469 103 aa6.81□□□□□ -1.32
PRPF8-215ENST00000576958 FABP9Q0Z7S8 132 aa6.81□□□□□ -1.32
PRPF8-215ENST00000576958 SPRR4Q96PI1 79 aa6.81□□□□□ -1.32
PRPF8-215ENST00000576958 IFITM2Q01629 132 aa6.8□□□□□ -1.32
PRPF8-215ENST00000576958 CLLU1Q5K131 121 aa6.8□□□□□ -1.32
PRPF8-215ENST00000576958 KRTAP13-3Q3SY46 172 aa6.79□□□□□ -1.32
PRPF8-215ENST00000576958 SMCO4Q9NRQ5 59 aa6.79□□□□□ -1.32
PRPF8-215ENST00000576958 NCR3O14931 201 aa6.78□□□□□ -1.32
PRPF8-215ENST00000576958 TMEM170BQ5T4T1 132 aa6.78□□□□□ -1.32
PRPF8-215ENST00000576958 Q8NBF4 154 aa6.78□□□□□ -1.32
PRPF8-215ENST00000576958 C18orf32Q8TCD1 76 aa6.78□□□□□ -1.32
PRPF8-215ENST00000576958 TRAV9-1A0A075B6T8 112 aa6.77□□□□□ -1.33
PRPF8-215ENST00000576958 LINC00158P58513 81 aa6.77□□□□□ -1.33
PRPF8-215ENST00000576958 BAGE3Q86Y29 109 aa6.77□□□□□ -1.33
PRPF8-215ENST00000576958 SMIM13P0DJ93 91 aa6.76□□□□□ -1.33
PRPF8-215ENST00000576958 RPL24P83731 157 aaKnown RBP6.76□□□□□ -1.33
PRPF8-215ENST00000576958 ERC2-IT1O76042 136 aa6.75□□□□□ -1.33
PRPF8-215ENST00000576958 S100PP25815 95 aa6.75□□□□□ -1.33
PRPF8-215ENST00000576958 SMCR5Q8TEV8 140 aa6.75□□□□□ -1.33
PRPF8-215ENST00000576958 FSIP2Q5CZC0 6907 aa6.75□□□□□ -1.33
PRPF8-215ENST00000576958 KRTAP4-16G5E9R7 235 aaPredicted RBP6.74□□□□□ -1.33
PRPF8-215ENST00000576958 HBDP02042 147 aa6.74□□□□□ -1.33
PRPF8-215ENST00000576958 LINC00614P0C842 121 aa6.74□□□□□ -1.33
PRPF8-215ENST00000576958 COX17Q14061 63 aa6.74□□□□□ -1.33
PRPF8-215ENST00000576958 RPS10P5Q9NQ39 176 aa6.74□□□□□ -1.33
PRPF8-215ENST00000576958 TMEM223A0PJW6 202 aa6.73□□□□□ -1.33
PRPF8-215ENST00000576958 UQCC3Q6UW78 93 aa6.73□□□□□ -1.33
PRPF8-215ENST00000576958 COMMD7Q86VX2 200 aa6.73□□□□□ -1.33
PRPF8-215ENST00000576958 SEC11CQ9BY50 192 aa6.73□□□□□ -1.33
PRPF8-215ENST00000576958 TRBV10-3A0A0K0K1G6 114 aa6.72□□□□□ -1.33
PRPF8-215ENST00000576958 LINC01549A6NIU2 74 aa6.72□□□□□ -1.33
PRPF8-215ENST00000576958 SPRR1AP35321 89 aa6.72□□□□□ -1.33
PRPF8-215ENST00000576958 ASB16-AS1Q495Z4 193 aa6.72□□□□□ -1.33
PRPF8-215ENST00000576958 BOD1L2Q8IYS8 172 aa6.72□□□□□ -1.33
PRPF8-215ENST00000576958 CHTOPQ9Y3Y2 248 aaKnown RBP6.72□□□□□ -1.33
PRPF8-215ENST00000576958 TRAPPC1Q9Y5R8 145 aa6.72□□□□□ -1.33
PRPF8-215ENST00000576958 TSPEAR-AS2P59090 65 aa6.71□□□□□ -1.34
PRPF8-215ENST00000576958 MIR7-3HGQ8N6C7 128 aa6.71□□□□□ -1.34
PRPF8-215ENST00000576958 IGLV9-49A0A0B4J1Y8 123 aa6.7□□□□□ -1.34
PRPF8-215ENST00000576958 PRYO14603 147 aa6.7□□□□□ -1.34
PRPF8-215ENST00000576958 MOBPQ13875 183 aa6.7□□□□□ -1.34
PRPF8-215ENST00000576958 C10orf91Q5T1B1 145 aa6.7□□□□□ -1.34
PRPF8-215ENST00000576958 LCE2CQ5TA81 110 aa6.7□□□□□ -1.34
PRPF8-215ENST00000576958 GAGE2AQ6NT46 116 aa6.7□□□□□ -1.34
PRPF8-215ENST00000576958 SPAG11AQ6PDA7 123 aa6.7□□□□□ -1.34
PRPF8-215ENST00000576958 FP248Q71RG6 208 aaPredicted RBP6.7□□□□□ -1.34
PRPF8-215ENST00000576958 LINC00337Q8N6G1 96 aa6.7□□□□□ -1.34
PRPF8-215ENST00000576958 KCNQ1DNQ9H478 68 aa6.69□□□□□ -1.34
PRPF8-215ENST00000576958 COX19Q49B96 90 aa6.68□□□□□ -1.34
PRPF8-215ENST00000576958 LINC00483Q53H64 154 aa6.68□□□□□ -1.34
PRPF8-215ENST00000576958 MEIG1Q5JSS6 88 aa6.68□□□□□ -1.34
PRPF8-215ENST00000576958 Q8N377 158 aa6.68□□□□□ -1.34
PRPF8-215ENST00000576958 Q9BRP9 147 aa6.68□□□□□ -1.34
PRPF8-215ENST00000576958 ETDCA0A1B0GVM5 59 aa6.67□□□□□ -1.34
PRPF8-215ENST00000576958 B5MCH6 92 aa6.67□□□□□ -1.34
PRPF8-215ENST00000576958 CTAG1AP78358 180 aa6.67□□□□□ -1.34
PRPF8-215ENST00000576958 KRTAP19-2Q3LHN2 52 aa6.67□□□□□ -1.34
PRPF8-215ENST00000576958 ZNF706Q9Y5V0 76 aaPredicted RBP6.67□□□□□ -1.34
PRPF8-215ENST00000576958 EIF4EBP3O60516 100 aaPredicted RBP6.66□□□□□ -1.34
PRPF8-215ENST00000576958 RHEBQ15382 184 aa6.66□□□□□ -1.34
PRPF8-215ENST00000576958 FAM19A2Q8N3H0 131 aa6.66□□□□□ -1.34
PRPF8-215ENST00000576958 H0Y8G0 127 aa6.65□□□□□ -1.34
PRPF8-215ENST00000576958 LINC01547P58512 204 aaPredicted RBP6.65□□□□□ -1.34
PRPF8-215ENST00000576958 XP32Q5T750 250 aa6.65□□□□□ -1.34
PRPF8-215ENST00000576958 IFI27L1Q96BM0 104 aa6.65□□□□□ -1.34
PRPF8-215ENST00000576958 SPINK1P00995 79 aa6.64□□□□□ -1.35
PRPF8-215ENST00000576958 ST20-AS1Q8NBB2 130 aa6.64□□□□□ -1.35
PRPF8-215ENST00000576958 YPEL4Q96NS1 127 aa6.64□□□□□ -1.35
PRPF8-215ENST00000576958 NDUFA12Q9UI09 145 aa6.64□□□□□ -1.35
PRPF8-215ENST00000576958 TRAV12-1A0A0B4J245 112 aa6.63□□□□□ -1.35
PRPF8-215ENST00000576958 ATP6V1G1O75348 118 aa6.63□□□□□ -1.35
PRPF8-215ENST00000576958 SMCPP49901 116 aaPredicted RBP6.62□□□□□ -1.35
PRPF8-215ENST00000576958 NPC2P61916 151 aa6.62□□□□□ -1.35
PRPF8-215ENST00000576958 SFTA2Q6UW10 78 aa6.62□□□□□ -1.35
PRPF8-215ENST00000576958 CRCT1Q9UGL9 99 aa6.62□□□□□ -1.35
PRPF8-215ENST00000576958 APOC3P02656 99 aa6.61□□□□□ -1.35
PRPF8-215ENST00000576958 DDTP30046 118 aa6.61□□□□□ -1.35
PRPF8-215ENST00000576958 LINC00310P59036 64 aa6.61□□□□□ -1.35
PRPF8-215ENST00000576958 SEC61BP60468 96 aaKnown RBP6.61□□□□□ -1.35
PRPF8-215ENST00000576958 SOSTDC1Q6X4U4 206 aa6.61□□□□□ -1.35
PRPF8-215ENST00000576958 PMCHL2Q9BQD1 86 aa6.61□□□□□ -1.35
PRPF8-215ENST00000576958 Q6ZRX8 168 aa6.6□□□□□ -1.35
PRPF8-215ENST00000576958 MT1HP80294 61 aa6.59□□□□□ -1.35
PRPF8-215ENST00000576958 C9orf153Q5TBE3 101 aa6.59□□□□□ -1.35
PRPF8-215ENST00000576958 HERV-K104P63124 156 aa6.58□□□□□ -1.36
PRPF8-215ENST00000576958 ADAMTSL4-AS1Q5T5F5 129 aa6.58□□□□□ -1.36
PRPF8-215ENST00000576958 HRCT1Q6UXD1 115 aa6.58□□□□□ -1.36
PRPF8-215ENST00000576958 CHCHD1Q96BP2 118 aaKnown RBP6.58□□□□□ -1.36
PRPF8-215ENST00000576958 MYMXA0A1B0GTQ4 84 aa6.57□□□□□ -1.36
PRPF8-215ENST00000576958 C9orf92A6NGG3 77 aa6.57□□□□□ -1.36
PRPF8-215ENST00000576958 LEPROTO15243 131 aa6.57□□□□□ -1.36
PRPF8-215ENST00000576958 SLC25A20O43772 301 aa6.57□□□□□ -1.36
PRPF8-215ENST00000576958 IGLV6-57P01721 117 aa6.57□□□□□ -1.36
PRPF8-215ENST00000576958 SSBP3-AS1Q7Z2R9 100 aa6.57□□□□□ -1.36
PRPF8-215ENST00000576958 LOC107984156A0A0G2JMH3 177 aa6.56□□□□□ -1.36
PRPF8-215ENST00000576958 PCOTHQ58A44 107 aa6.56□□□□□ -1.36
PRPF8-215ENST00000576958 ARL17AQ8IVW1 177 aa6.56□□□□□ -1.36
PRPF8-215ENST00000576958 J3QQQ9 107 aa6.55□□□□□ -1.36
PRPF8-215ENST00000576958 RPS29P62273 56 aaKnown RBP6.55□□□□□ -1.36
PRPF8-215ENST00000576958 TRAV23DV6A0A075B6W5 121 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms