RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 LINC00587B1AMM8 73 aa14.29□□□□□ -0.12
SNF8-217ENST00000576353 IGKCP01834 107 aa14.29□□□□□ -0.12
SNF8-217ENST00000576353 HERVK_113P61574 105 aa14.29□□□□□ -0.12
SNF8-217ENST00000576353 PMCHL2Q9BQD1 86 aa14.29□□□□□ -0.12
SNF8-217ENST00000576353 NDUFA12Q9UI09 145 aa14.29□□□□□ -0.12
SNF8-217ENST00000576353 MYMXA0A1B0GTQ4 84 aa14.28□□□□□ -0.12
SNF8-217ENST00000576353 GAGE10A6NGK3 116 aa14.28□□□□□ -0.12
SNF8-217ENST00000576353 RPL37AP8A6NKH3 93 aa14.28□□□□□ -0.12
SNF8-217ENST00000576353 H0Y9J4 135 aa14.28□□□□□ -0.12
SNF8-217ENST00000576353 LEPROTO15243 131 aa14.28□□□□□ -0.12
SNF8-217ENST00000576353 ATP6V1G1O75348 118 aa14.28□□□□□ -0.12
SNF8-217ENST00000576353 PLEKHB2Q96CS7 222 aa14.28□□□□□ -0.12
SNF8-217ENST00000576353 MEIG1Q5JSS6 88 aa14.27□□□□□ -0.13
SNF8-217ENST00000576353 A0A0U1RRA0 63 aa14.26□□□□□ -0.13
SNF8-217ENST00000576353 VPREB1P12018 145 aa14.26□□□□□ -0.13
SNF8-217ENST00000576353 ZNF861PO60384 105 aa14.25□□□□□ -0.13
SNF8-217ENST00000576353 SMIM13P0DJ93 91 aa14.25□□□□□ -0.13
SNF8-217ENST00000576353 SYS1-DBNDD2H3BUS1 97 aa14.24□□□□□ -0.13
SNF8-217ENST00000576353 BCE1O60756 84 aa14.24□□□□□ -0.13
SNF8-217ENST00000576353 S100A1P23297 94 aa14.24□□□□□ -0.13
SNF8-217ENST00000576353 KRTAP10-8P60410 259 aa14.24□□□□□ -0.13
SNF8-217ENST00000576353 COA6Q5JTJ3 125 aaKnown RBP14.24□□□□□ -0.13
SNF8-217ENST00000576353 J3QQQ9 107 aa14.23□□□□□ -0.13
SNF8-217ENST00000576353 RPL28P46779 137 aaKnown RBP14.21□□□□□ -0.13
SNF8-217ENST00000576353 NMUP48645 174 aa14.21□□□□□ -0.13
SNF8-217ENST00000576353 TSPEAR-AS2P59090 65 aa14.21□□□□□ -0.13
SNF8-217ENST00000576353 IGKV2-28A0A075B6P5 120 aa14.2□□□□□ -0.14
SNF8-217ENST00000576353 IGKV2D-28P01615 120 aa14.2□□□□□ -0.14
SNF8-217ENST00000576353 LGALS3P17931 250 aaKnown RBP14.2□□□□□ -0.14
SNF8-217ENST00000576353 PET117Q6UWS5 81 aa14.2□□□□□ -0.14
SNF8-217ENST00000576353 MIR7-3HGQ8N6C7 128 aa14.2□□□□□ -0.14
SNF8-217ENST00000576353 IGLV1-50A0A075B6I6 118 aa14.19□□□□□ -0.14
SNF8-217ENST00000576353 Q8NDZ9 215 aa14.18□□□□□ -0.14
SNF8-217ENST00000576353 LINC01545Q5VT33 79 aa14.17□□□□□ -0.14
SNF8-217ENST00000576353 BOD1L2Q8IYS8 172 aa14.16□□□□□ -0.14
SNF8-217ENST00000576353 E9PLD3 99 aa14.15□□□□□ -0.14
SNF8-217ENST00000576353 M0R378 163 aa14.14□□□□□ -0.15
SNF8-217ENST00000576353 UBE2AP49459 152 aa14.14□□□□□ -0.15
SNF8-217ENST00000576353 KRTAP1-4P0C5Y4 121 aa14.13□□□□□ -0.15
SNF8-217ENST00000576353 C3orf79P0CE67 100 aa14.13□□□□□ -0.15
SNF8-217ENST00000576353 PRR26Q8N8Z3 221 aa14.12□□□□□ -0.15
SNF8-217ENST00000576353 TMEM126AQ9H061 195 aa14.12□□□□□ -0.15
SNF8-217ENST00000576353 KRTDAPP60985 99 aa14.11□□□□□ -0.15
SNF8-217ENST00000576353 IGKV2D-26A0A0A0MRZ7 120 aa14.09□□□□□ -0.15
SNF8-217ENST00000576353 LOC107984156A0A0G2JMH3 177 aa14.09□□□□□ -0.15
SNF8-217ENST00000576353 TMEM238C9JI98 176 aa14.09□□□□□ -0.15
SNF8-217ENST00000576353 KRTAP13-1Q8IUC0 172 aa14.09□□□□□ -0.15
SNF8-217ENST00000576353 ARL17AQ8IVW1 177 aa14.09□□□□□ -0.15
SNF8-217ENST00000576353 DAND5Q8N907 189 aa14.08□□□□□ -0.16
SNF8-217ENST00000576353 C20orf202A1L168 122 aa14.07□□□□□ -0.16
SNF8-217ENST00000576353 RPL13AP40429 203 aaKnown RBP14.07□□□□□ -0.16
SNF8-217ENST00000576353 FAM19A1Q7Z5A9 133 aa14.07□□□□□ -0.16
SNF8-217ENST00000576353 TNXBP22105 4242 aa14.06□□□□□ -0.16
SNF8-217ENST00000576353 A0A0J9YXY3 114 aa14.06□□□□□ -0.16
SNF8-217ENST00000576353 NCR3O14931 201 aa14.06□□□□□ -0.16
SNF8-217ENST00000576353 MIEN1Q9BRT3 115 aa14.06□□□□□ -0.16
SNF8-217ENST00000576353 PRLHP81277 87 aa14.04□□□□□ -0.16
SNF8-217ENST00000576353 PRYO14603 147 aa14.01□□□□□ -0.17
SNF8-217ENST00000576353 AKR1D1P51857 326 aa14.01□□□□□ -0.17
SNF8-217ENST00000576353 KCNQ1DNQ9H478 68 aa14.01□□□□□ -0.17
SNF8-217ENST00000576353 TRBV10-2A0A0K0K1G8 114 aa14□□□□□ -0.17
SNF8-217ENST00000576353 S100A12P80511 92 aa14□□□□□ -0.17
SNF8-217ENST00000576353 ADAMTSL4-AS1Q5T5F5 129 aa13.99□□□□□ -0.17
SNF8-217ENST00000576353 HMCN2Q8NDA2 5059 aa13.98□□□□□ -0.17
SNF8-217ENST00000576353 TRBV10-3A0A0K0K1G6 114 aa13.98□□□□□ -0.17
SNF8-217ENST00000576353 ZNF815PA8K554 130 aa13.98□□□□□ -0.17
SNF8-217ENST00000576353 NDUFC2O95298 119 aa13.98□□□□□ -0.17
SNF8-217ENST00000576353 SPANXB1Q9NS25 103 aaPredicted RBP13.98□□□□□ -0.17
SNF8-217ENST00000576353 TIMM17BO60830 172 aa13.97□□□□□ -0.17
SNF8-217ENST00000576353 CRYGAP11844 174 aa13.97□□□□□ -0.17
SNF8-217ENST00000576353 S100A2P29034 98 aa13.97□□□□□ -0.17
SNF8-217ENST00000576353 HIST3H2BBQ8N257 126 aa13.96□□□□□ -0.17
SNF8-217ENST00000576353 LINC00337Q8N6G1 96 aa13.96□□□□□ -0.17
SNF8-217ENST00000576353 S100A6P06703 90 aa13.95□□□□□ -0.18
SNF8-217ENST00000576353 DDTP30046 118 aa13.95□□□□□ -0.18
SNF8-217ENST00000576353 SPRR1AP35321 89 aa13.95□□□□□ -0.18
SNF8-217ENST00000576353 NPC2P61916 151 aa13.94□□□□□ -0.18
SNF8-217ENST00000576353 SOSTDC1Q6X4U4 206 aa13.94□□□□□ -0.18
SNF8-217ENST00000576353 LITAFQ99732 161 aa13.94□□□□□ -0.18
SNF8-217ENST00000576353 HIGD2AQ9BW72 106 aa13.94□□□□□ -0.18
SNF8-217ENST00000576353 HIST1H2BLQ99880 126 aa13.93□□□□□ -0.18
SNF8-217ENST00000576353 A0A087X002 238 aa13.92□□□□□ -0.18
SNF8-217ENST00000576353 ETDCA0A1B0GVM5 59 aa13.92□□□□□ -0.18
SNF8-217ENST00000576353 FAM229BQ4G0N7 80 aa13.92□□□□□ -0.18
SNF8-217ENST00000576353 S100A7L2Q5SY68 101 aa13.92□□□□□ -0.18
SNF8-217ENST00000576353 ATOH7Q8N100 152 aa13.92□□□□□ -0.18
SNF8-217ENST00000576353 TTTY13Q9BZ97 58 aa13.92□□□□□ -0.18
SNF8-217ENST00000576353 ANAPC11Q9NYG5 84 aa13.92□□□□□ -0.18
SNF8-217ENST00000576353 EIF4EBP3O60516 100 aaPredicted RBP13.91□□□□□ -0.18
SNF8-217ENST00000576353 LINC00308Q8TCZ7 52 aa13.91□□□□□ -0.18
SNF8-217ENST00000576353 ANKRD39Q53RE8 183 aa13.9□□□□□ -0.18
SNF8-217ENST00000576353 TYMSOSQ8TAI1 123 aa13.9□□□□□ -0.18
SNF8-217ENST00000576353 KRTAP4-16G5E9R7 235 aaPredicted RBP13.89□□□□□ -0.19
SNF8-217ENST00000576353 IGLV6-57P01721 117 aa13.89□□□□□ -0.19
SNF8-217ENST00000576353 SNRPEP62304 92 aaKnown RBP13.89□□□□□ -0.19
SNF8-217ENST00000576353 SCGB1D4Q6XE38 83 aa13.88□□□□□ -0.19
SNF8-217ENST00000576353 SPANXCQ9NY87 97 aa13.88□□□□□ -0.19
SNF8-217ENST00000576353 ZNF706Q9Y5V0 76 aaPredicted RBP13.86□□□□□ -0.19
SNF8-217ENST00000576353 CBY1Q9Y3M2 126 aa13.85□□□□□ -0.19
SNF8-217ENST00000576353 B5MCH6 92 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms