RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 IGLC3P0DOY3 106 aa6.04□□□□□ -1.44
TVP23B-208ENST00000575261 RPL24P83731 157 aaKnown RBP6.04□□□□□ -1.44
TVP23B-208ENST00000575261 GNB1LQ9BYB4 327 aa6.04□□□□□ -1.44
TVP23B-208ENST00000575261 SND1-IT1Q9HBX3 110 aa6.04□□□□□ -1.44
TVP23B-208ENST00000575261 ERG28Q9UKR5 140 aa6.04□□□□□ -1.44
TVP23B-208ENST00000575261 TMA7Q9Y2S6 64 aaKnown RBP6.04□□□□□ -1.44
TVP23B-208ENST00000575261 IGLV7-46A0A075B6I9 117 aa6.03□□□□□ -1.44
TVP23B-208ENST00000575261 S100PP25815 95 aa6.03□□□□□ -1.44
TVP23B-208ENST00000575261 COX17Q14061 63 aa6.03□□□□□ -1.44
TVP23B-208ENST00000575261 M0R378 163 aa6.02□□□□□ -1.45
TVP23B-208ENST00000575261 ZNF22P17026 224 aaPredicted RBP6.02□□□□□ -1.45
TVP23B-208ENST00000575261 RHEBQ15382 184 aa6.02□□□□□ -1.45
TVP23B-208ENST00000575261 COX19Q49B96 90 aa6.02□□□□□ -1.45
TVP23B-208ENST00000575261 SFTA2Q6UW10 78 aa6.02□□□□□ -1.45
TVP23B-208ENST00000575261 CBLN2Q8IUK8 224 aa6.02□□□□□ -1.45
TVP23B-208ENST00000575261 NDUFA6P56556 154 aa6.01□□□□□ -1.45
TVP23B-208ENST00000575261 PLEKHB2Q96CS7 222 aa6.01□□□□□ -1.45
TVP23B-208ENST00000575261 HIGD2AQ9BW72 106 aa6.01□□□□□ -1.45
TVP23B-208ENST00000575261 FABP9Q0Z7S8 132 aa6□□□□□ -1.45
TVP23B-208ENST00000575261 SPAG11AQ6PDA7 123 aa6□□□□□ -1.45
TVP23B-208ENST00000575261 C3orf22Q8N5N4 141 aa6□□□□□ -1.45
TVP23B-208ENST00000575261 ZNF625Q96I27 306 aaPredicted RBP6□□□□□ -1.45
TVP23B-208ENST00000575261 PPDPFQ9H3Y8 114 aa6□□□□□ -1.45
TVP23B-208ENST00000575261 A0A096LNJ9 63 aa5.99□□□□□ -1.45
TVP23B-208ENST00000575261 XP32Q5T750 250 aa5.99□□□□□ -1.45
TVP23B-208ENST00000575261 Q8NDZ9 215 aa5.99□□□□□ -1.45
TVP23B-208ENST00000575261 LOC105371267A0A1B0GV96 52 aa5.98□□□□□ -1.45
TVP23B-208ENST00000575261 HBDP02042 147 aa5.98□□□□□ -1.45
TVP23B-208ENST00000575261 RPS10P5Q9NQ39 176 aa5.98□□□□□ -1.45
TVP23B-208ENST00000575261 ZNF706Q9Y5V0 76 aaPredicted RBP5.98□□□□□ -1.45
TVP23B-208ENST00000575261 C11orf86A6NJI1 115 aa5.97□□□□□ -1.45
TVP23B-208ENST00000575261 TMEM170BQ5T4T1 132 aa5.97□□□□□ -1.45
TVP23B-208ENST00000575261 FP248Q71RG6 208 aaPredicted RBP5.97□□□□□ -1.45
TVP23B-208ENST00000575261 SPRR4Q96PI1 79 aa5.97□□□□□ -1.45
TVP23B-208ENST00000575261 LINC00614P0C842 121 aa5.96□□□□□ -1.46
TVP23B-208ENST00000575261 LINC00158P58513 81 aa5.96□□□□□ -1.46
TVP23B-208ENST00000575261 C18orf32Q8TCD1 76 aa5.96□□□□□ -1.46
TVP23B-208ENST00000575261 COLCA2A8K830 154 aa5.95□□□□□ -1.46
TVP23B-208ENST00000575261 PRYO14603 147 aa5.95□□□□□ -1.46
TVP23B-208ENST00000575261 PMCHL1Q16048 86 aa5.95□□□□□ -1.46
TVP23B-208ENST00000575261 BAGE3Q86Y29 109 aa5.95□□□□□ -1.46
TVP23B-208ENST00000575261 URB1-AS1Q96HZ7 61 aa5.95□□□□□ -1.46
TVP23B-208ENST00000575261 KRTAP9-6A0A140TA67 174 aa5.94□□□□□ -1.46
TVP23B-208ENST00000575261 A0A0U1RRA0 63 aa5.93□□□□□ -1.46
TVP23B-208ENST00000575261 LINC00337Q8N6G1 96 aa5.93□□□□□ -1.46
TVP23B-208ENST00000575261 Q8NBF4 154 aa5.93□□□□□ -1.46
TVP23B-208ENST00000575261 TRAPPC1Q9Y5R8 145 aa5.93□□□□□ -1.46
TVP23B-208ENST00000575261 KRTAP13-3Q3SY46 172 aa5.92□□□□□ -1.46
TVP23B-208ENST00000575261 DAND5Q8N907 189 aa5.92□□□□□ -1.46
TVP23B-208ENST00000575261 CHTOPQ9Y3Y2 248 aaKnown RBP5.92□□□□□ -1.46
TVP23B-208ENST00000575261 ETDCA0A1B0GVM5 59 aa5.91□□□□□ -1.46
TVP23B-208ENST00000575261 TMEM223A0PJW6 202 aa5.91□□□□□ -1.46
TVP23B-208ENST00000575261 NCR3O14931 201 aa5.91□□□□□ -1.46
TVP23B-208ENST00000575261 SPINK1P00995 79 aa5.91□□□□□ -1.46
TVP23B-208ENST00000575261 SPRR1AP35321 89 aa5.91□□□□□ -1.46
TVP23B-208ENST00000575261 MEIG1Q5JSS6 88 aa5.91□□□□□ -1.46
TVP23B-208ENST00000575261 BOD1L2Q8IYS8 172 aa5.91□□□□□ -1.46
TVP23B-208ENST00000575261 YPEL4Q96NS1 127 aa5.91□□□□□ -1.46
TVP23B-208ENST00000575261 SMIM13P0DJ93 91 aa5.9□□□□□ -1.46
TVP23B-208ENST00000575261 S100A12P80511 92 aa5.9□□□□□ -1.46
TVP23B-208ENST00000575261 ASB16-AS1Q495Z4 193 aa5.9□□□□□ -1.46
TVP23B-208ENST00000575261 LINC00483Q53H64 154 aa5.9□□□□□ -1.46
TVP23B-208ENST00000575261 KCNQ1DNQ9H478 68 aa5.9□□□□□ -1.46
TVP23B-208ENST00000575261 NDUFA12Q9UI09 145 aa5.9□□□□□ -1.46
TVP23B-208ENST00000575261 TRAV12-1A0A0B4J245 112 aa5.89□□□□□ -1.47
TVP23B-208ENST00000575261 KRTAP4-16G5E9R7 235 aaPredicted RBP5.89□□□□□ -1.47
TVP23B-208ENST00000575261 HERV-K104P63124 156 aa5.89□□□□□ -1.47
TVP23B-208ENST00000575261 FAM19A2Q8N3H0 131 aa5.89□□□□□ -1.47
TVP23B-208ENST00000575261 MIR7-3HGQ8N6C7 128 aa5.89□□□□□ -1.47
TVP23B-208ENST00000575261 SMCR5Q8TEV8 140 aa5.89□□□□□ -1.47
TVP23B-208ENST00000575261 TRBV10-3A0A0K0K1G6 114 aa5.88□□□□□ -1.47
TVP23B-208ENST00000575261 LINC00587B1AMM8 73 aa5.88□□□□□ -1.47
TVP23B-208ENST00000575261 S100A6P06703 90 aa5.88□□□□□ -1.47
TVP23B-208ENST00000575261 LINC01547P58512 204 aaPredicted RBP5.88□□□□□ -1.47
TVP23B-208ENST00000575261 SEC61BP60468 96 aaKnown RBP5.88□□□□□ -1.47
TVP23B-208ENST00000575261 IFI27L1Q96BM0 104 aa5.88□□□□□ -1.47
TVP23B-208ENST00000575261 RPS29P62273 56 aaKnown RBP5.87□□□□□ -1.47
TVP23B-208ENST00000575261 MOBPQ13875 183 aa5.87□□□□□ -1.47
TVP23B-208ENST00000575261 GAGE2AQ6NT46 116 aa5.87□□□□□ -1.47
TVP23B-208ENST00000575261 MAP1LC3CQ9BXW4 147 aa5.87□□□□□ -1.47
TVP23B-208ENST00000575261 IGLV9-49A0A0B4J1Y8 123 aa5.86□□□□□ -1.47
TVP23B-208ENST00000575261 CHCHD1Q96BP2 118 aaKnown RBP5.86□□□□□ -1.47
TVP23B-208ENST00000575261 MYMXA0A1B0GTQ4 84 aa5.85□□□□□ -1.47
TVP23B-208ENST00000575261 C5orf52A6NGY3 159 aa5.85□□□□□ -1.47
TVP23B-208ENST00000575261 B5MCH6 92 aa5.85□□□□□ -1.47
TVP23B-208ENST00000575261 Q8N377 158 aa5.85□□□□□ -1.47
TVP23B-208ENST00000575261 DDTP30046 118 aa5.84□□□□□ -1.47
TVP23B-208ENST00000575261 SSBP3-AS1Q7Z2R9 100 aa5.84□□□□□ -1.47
TVP23B-208ENST00000575261 TRBV10-2A0A0K0K1G8 114 aa5.83□□□□□ -1.48
TVP23B-208ENST00000575261 SLC25A20O43772 301 aa5.83□□□□□ -1.48
TVP23B-208ENST00000575261 ERC2-IT1O76042 136 aa5.83□□□□□ -1.48
TVP23B-208ENST00000575261 SNRPEP62304 92 aaKnown RBP5.83□□□□□ -1.48
TVP23B-208ENST00000575261 Q6ZRX8 168 aa5.83□□□□□ -1.48
TVP23B-208ENST00000575261 KRTAP4-1Q9BYQ7 146 aa5.83□□□□□ -1.48
TVP23B-208ENST00000575261 HSBP1O75506 76 aa5.82□□□□□ -1.48
TVP23B-208ENST00000575261 AKR1D1P51857 326 aa5.82□□□□□ -1.48
TVP23B-208ENST00000575261 LINC00518Q8N0U6 118 aa5.82□□□□□ -1.48
TVP23B-208ENST00000575261 Q9BRP9 147 aa5.82□□□□□ -1.48
TVP23B-208ENST00000575261 MIEN1Q9BRT3 115 aa5.82□□□□□ -1.48
TVP23B-208ENST00000575261 KRTAP4-8Q9BYQ9 185 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms