RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 TRAV13-2A0A0B4J235 113 aa7.08□□□□□ -1.28
USP43-205ENST00000574408 IGKV2D-28P01615 120 aa7.08□□□□□ -1.28
USP43-205ENST00000574408 CXCL5P42830 114 aa7.08□□□□□ -1.28
USP43-205ENST00000574408 K7EIL1 84 aa7.08□□□□□ -1.28
USP43-205ENST00000574408 SPAG11BQ08648 103 aa7.08□□□□□ -1.28
USP43-205ENST00000574408 ESRGQ1W209 222 aa7.08□□□□□ -1.28
USP43-205ENST00000574408 LINC00526Q96FQ7 95 aa7.08□□□□□ -1.28
USP43-205ENST00000574408 PRR3P79522 188 aaKnown RBP7.08□□□□□ -1.28
USP43-205ENST00000574408 TRAV23DV6A0A075B6W5 121 aa7.07□□□□□ -1.28
USP43-205ENST00000574408 C9orf116Q5BN46 136 aaPredicted RBP7.07□□□□□ -1.28
USP43-205ENST00000574408 DSCR8Q96T75 97 aa7.07□□□□□ -1.28
USP43-205ENST00000574408 C6orf223Q8N319 242 aa7.07□□□□□ -1.28
USP43-205ENST00000574408 FAM218AQ96MZ4 157 aa7.06□□□□□ -1.28
USP43-205ENST00000574408 TM2D3Q9BRN9 247 aa7.05□□□□□ -1.28
USP43-205ENST00000574408 TMEM126AQ9H061 195 aa7.05□□□□□ -1.28
USP43-205ENST00000574408 HAMPP81172 84 aa7.05□□□□□ -1.28
USP43-205ENST00000574408 C10orf25Q5T742 122 aa7.05□□□□□ -1.28
USP43-205ENST00000574408 UNQ6190/PRO20217Q6UXQ8 127 aa7.05□□□□□ -1.28
USP43-205ENST00000574408 SMCR5Q8TEV8 140 aa7.05□□□□□ -1.28
USP43-205ENST00000574408 TRACP01848 142 aa7.04□□□□□ -1.28
USP43-205ENST00000574408 COX17Q14061 63 aa7.04□□□□□ -1.28
USP43-205ENST00000574408 TRAV10A0A0B4J240 114 aa7.03□□□□□ -1.28
USP43-205ENST00000574408 RPL28P46779 137 aaKnown RBP7.03□□□□□ -1.28
USP43-205ENST00000574408 LINC00643Q86TS7 51 aa7.03□□□□□ -1.28
USP43-205ENST00000574408 SMIM11BQ8TCY0 68 aa7.03□□□□□ -1.28
USP43-205ENST00000574408 A0A087WYN8 130 aa7.03□□□□□ -1.28
USP43-205ENST00000574408 C5orf47Q569G3 176 aa7.03□□□□□ -1.28
USP43-205ENST00000574408 C3orf22Q8N5N4 141 aa7.03□□□□□ -1.28
USP43-205ENST00000574408 LAMTOR3Q9UHA4 124 aa7.03□□□□□ -1.28
USP43-205ENST00000574408 INAFM2P0DMQ5 153 aa7.02□□□□□ -1.29
USP43-205ENST00000574408 MDFIQ99750 246 aa7.02□□□□□ -1.29
USP43-205ENST00000574408 LINC01556Q5JQF7 62 aa7.01□□□□□ -1.29
USP43-205ENST00000574408 C9orf129Q5T035 196 aaKnown RBP7.01□□□□□ -1.29
USP43-205ENST00000574408 HUWE1Q7Z6Z7 4374 aaKnown RBP7.01□□□□□ -1.29
USP43-205ENST00000574408 HIGD2BQ4VC39 106 aa7.01□□□□□ -1.29
USP43-205ENST00000574408 SCXQ7RTU7 201 aa7.01□□□□□ -1.29
USP43-205ENST00000574408 FAM19A5Q7Z5A7 132 aaPredicted RBP7.01□□□□□ -1.29
USP43-205ENST00000574408 C20orf197Q8N268 126 aa7.01□□□□□ -1.29
USP43-205ENST00000574408 C1orf43Q9BWL3 253 aa7.01□□□□□ -1.29
USP43-205ENST00000574408 KRTAP26-1Q6PEX3 210 aa7□□□□□ -1.29
USP43-205ENST00000574408 LINC01600Q96MT4 127 aa7□□□□□ -1.29
USP43-205ENST00000574408 UQCRQO14949 82 aa7□□□□□ -1.29
USP43-205ENST00000574408 STAB2Q8WWQ8 2551 aa7□□□□□ -1.29
USP43-205ENST00000574408 IGKV2D-24A0A075B6R9 120 aa6.99□□□□□ -1.29
USP43-205ENST00000574408 ZNF561-AS1K7EIQ3 104 aa6.99□□□□□ -1.29
USP43-205ENST00000574408 S100A7L2Q5SY68 101 aa6.99□□□□□ -1.29
USP43-205ENST00000574408 HRCT1Q6UXD1 115 aa6.99□□□□□ -1.29
USP43-205ENST00000574408 LINC00846Q9NV44 126 aa6.99□□□□□ -1.29
USP43-205ENST00000574408 C6orf48Q9UBA6 75 aa6.99□□□□□ -1.29
USP43-205ENST00000574408 NDUFC2O95298 119 aa6.98□□□□□ -1.29
USP43-205ENST00000574408 Q8NDZ9 215 aa6.98□□□□□ -1.29
USP43-205ENST00000574408 CAMK2N2Q96S95 79 aa6.98□□□□□ -1.29
USP43-205ENST00000574408 LINC00588Q9Y4M8 146 aa6.98□□□□□ -1.29
USP43-205ENST00000574408 DNAH10OSP0CZ25 163 aa6.97□□□□□ -1.29
USP43-205ENST00000574408 Q6Q795 121 aa6.97□□□□□ -1.29
USP43-205ENST00000574408 GVQW2A0A096LPI5 108 aaPredicted RBP6.97□□□□□ -1.29
USP43-205ENST00000574408 H0YGX0 51 aa6.97□□□□□ -1.29
USP43-205ENST00000574408 J3KT08 172 aa6.97□□□□□ -1.29
USP43-205ENST00000574408 ACYP1P07311 99 aa6.97□□□□□ -1.29
USP43-205ENST00000574408 C15orf56Q8N910 161 aa6.97□□□□□ -1.29
USP43-205ENST00000574408 GHRHP01286 108 aa6.97□□□□□ -1.29
USP43-205ENST00000574408 FAM19A1Q7Z5A9 133 aa6.97□□□□□ -1.29
USP43-205ENST00000574408 MUC7Q8TAX7 377 aa6.96□□□□□ -1.3
USP43-205ENST00000574408 XAGE1AQ9HD64 81 aa6.96□□□□□ -1.3
USP43-205ENST00000574408 SNURFQ9Y675 71 aa6.96□□□□□ -1.3
USP43-205ENST00000574408 USP17L23D6RBM5 183 aa6.96□□□□□ -1.3
USP43-205ENST00000574408 COX7CP15954 63 aa6.96□□□□□ -1.3
USP43-205ENST00000574408 ATOX1O00244 68 aa6.95□□□□□ -1.3
USP43-205ENST00000574408 Q6ZRU5 148 aa6.95□□□□□ -1.3
USP43-205ENST00000574408 CYSTM1Q9H1C7 97 aa6.95□□□□□ -1.3
USP43-205ENST00000574408 ORMDL1Q9P0S3 153 aa6.94□□□□□ -1.3
USP43-205ENST00000574408 RPL18AQ02543 176 aaKnown RBP6.94□□□□□ -1.3
USP43-205ENST00000574408 C4orf26Q17RF5 130 aa6.94□□□□□ -1.3
USP43-205ENST00000574408 C2orf48Q96LS8 159 aa6.93□□□□□ -1.3
USP43-205ENST00000574408 C6orf99Q4VX62 202 aa6.92□□□□□ -1.3
USP43-205ENST00000574408 TRBV7-7A0A0K0K1E9 115 aa6.91□□□□□ -1.3
USP43-205ENST00000574408 FAM240AA0A1B0GVK7 77 aa6.91□□□□□ -1.3
USP43-205ENST00000574408 UBL5Q9BZL1 73 aa6.91□□□□□ -1.3
USP43-205ENST00000574408 C22orf24Q9Y442 160 aa6.91□□□□□ -1.3
USP43-205ENST00000574408 DNAH9Q9NYC9 4486 aa6.9□□□□□ -1.3
USP43-205ENST00000574408 SYCNQ0VAF6 134 aa6.9□□□□□ -1.3
USP43-205ENST00000574408 NDUFC2-KCTD14E9PQ53 114 aa6.9□□□□□ -1.31
USP43-205ENST00000574408 PKIGQ9Y2B9 76 aa6.9□□□□□ -1.31
USP43-205ENST00000574408 CASC10Q5T4H9 136 aa6.89□□□□□ -1.31
USP43-205ENST00000574408 RBM3P98179 157 aaKnown RBP6.89□□□□□ -1.31
USP43-205ENST00000574408 TRBV10-3A0A0K0K1G6 114 aa6.89□□□□□ -1.31
USP43-205ENST00000574408 A0A0U1RQV1 116 aa6.89□□□□□ -1.31
USP43-205ENST00000574408 IGLV6-57P01721 117 aa6.89□□□□□ -1.31
USP43-205ENST00000574408 B9D2Q9BPU9 175 aa6.89□□□□□ -1.31
USP43-205ENST00000574408 DEFB105AQ8NG35 78 aa6.88□□□□□ -1.31
USP43-205ENST00000574408 UPK3BQ9BT76 320 aa6.88□□□□□ -1.31
USP43-205ENST00000574408 SERP2Q8N6R1 65 aa6.88□□□□□ -1.31
USP43-205ENST00000574408 RMI2Q96E14 147 aa6.88□□□□□ -1.31
USP43-205ENST00000574408 COL7A1Q02388 2944 aa6.88□□□□□ -1.31
USP43-205ENST00000574408 Q6ZRP5 223 aa6.88□□□□□ -1.31
USP43-205ENST00000574408 IMUPQ9GZP8 106 aa6.88□□□□□ -1.31
USP43-205ENST00000574408 VPREB1P12018 145 aa6.87□□□□□ -1.31
USP43-205ENST00000574408 Q8N814 137 aa6.87□□□□□ -1.31
USP43-205ENST00000574408 MPLKIPQ8TAP9 179 aa6.87□□□□□ -1.31
USP43-205ENST00000574408 F8WDY8 70 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms