RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 KRTAP1-5Q9BYS1 174 aa18.69■□□□□ 0.58
CTDNEP1-210ENST00000574322 LINC01620Q4KN68 170 aa18.69■□□□□ 0.58
CTDNEP1-210ENST00000574322 TENM2Q9NT68 2774 aa18.68■□□□□ 0.58
CTDNEP1-210ENST00000574322 USP17L23D6RBM5 183 aa18.68■□□□□ 0.58
CTDNEP1-210ENST00000574322 M0QXV9 152 aa18.68■□□□□ 0.58
CTDNEP1-210ENST00000574322 MTURNQ8N3F0 131 aa18.68■□□□□ 0.58
CTDNEP1-210ENST00000574322 SMIM11BQ8TCY0 68 aa18.68■□□□□ 0.58
CTDNEP1-210ENST00000574322 RNF151Q2KHN1 245 aa18.67■□□□□ 0.58
CTDNEP1-210ENST00000574322 Q8NDZ9 215 aa18.67■□□□□ 0.58
CTDNEP1-210ENST00000574322 CLEC2BQ92478 149 aa18.67■□□□□ 0.58
CTDNEP1-210ENST00000574322 LINC01600Q96MT4 127 aa18.67■□□□□ 0.58
CTDNEP1-210ENST00000574322 NDUFC2-KCTD14E9PQ53 114 aa18.66■□□□□ 0.58
CTDNEP1-210ENST00000574322 OCIAD2Q56VL3 154 aa18.66■□□□□ 0.58
CTDNEP1-210ENST00000574322 OR13C6PQ8NH95 151 aa18.65■□□□□ 0.58
CTDNEP1-210ENST00000574322 PRR3P79522 188 aaKnown RBP18.64■□□□□ 0.57
CTDNEP1-210ENST00000574322 TMEM126AQ9H061 195 aa18.64■□□□□ 0.57
CTDNEP1-210ENST00000574322 TRBV10-2A0A0K0K1G8 114 aa18.63■□□□□ 0.57
CTDNEP1-210ENST00000574322 C9JAW5 83 aa18.63■□□□□ 0.57
CTDNEP1-210ENST00000574322 SLC25A20O43772 301 aa18.61■□□□□ 0.57
CTDNEP1-210ENST00000574322 ETDBQ3ZM63 59 aa18.6■□□□□ 0.57
CTDNEP1-210ENST00000574322 TLX1NBP0CAT3 122 aa18.6■□□□□ 0.57
CTDNEP1-210ENST00000574322 CARD19Q96LW7 228 aa18.6■□□□□ 0.57
CTDNEP1-210ENST00000574322 H0YGX0 51 aa18.59■□□□□ 0.57
CTDNEP1-210ENST00000574322 SLPIP03973 132 aa18.59■□□□□ 0.57
CTDNEP1-210ENST00000574322 XAGE1AQ9HD64 81 aa18.58■□□□□ 0.57
CTDNEP1-210ENST00000574322 TRACP01848 142 aa18.57■□□□□ 0.56
CTDNEP1-210ENST00000574322 TTC32Q5I0X7 151 aa18.57■□□□□ 0.56
CTDNEP1-210ENST00000574322 K7ERU9 68 aa18.57■□□□□ 0.56
CTDNEP1-210ENST00000574322 NCR3O14931 201 aa18.56■□□□□ 0.56
CTDNEP1-210ENST00000574322 Q6ZRP5 223 aa18.56■□□□□ 0.56
CTDNEP1-210ENST00000574322 ANKRD29Q8N6D5 301 aa18.55■□□□□ 0.56
CTDNEP1-210ENST00000574322 NBDYA0A0U1RRE5 68 aa18.54■□□□□ 0.56
CTDNEP1-210ENST00000574322 IGLV6-57P01721 117 aa18.54■□□□□ 0.56
CTDNEP1-210ENST00000574322 H3BT86 120 aa18.53■□□□□ 0.56
CTDNEP1-210ENST00000574322 TEN1Q86WV5 123 aa18.53■□□□□ 0.56
CTDNEP1-210ENST00000574322 FAM218AQ96MZ4 157 aa18.53■□□□□ 0.56
CTDNEP1-210ENST00000574322 LYSTQ99698 3801 aa18.53■□□□□ 0.56
CTDNEP1-210ENST00000574322 VPREB1P12018 145 aa18.52■□□□□ 0.56
CTDNEP1-210ENST00000574322 S100A7L2Q5SY68 101 aa18.52■□□□□ 0.55
CTDNEP1-210ENST00000574322 LY6G6CO95867 125 aa18.51■□□□□ 0.55
CTDNEP1-210ENST00000574322 LINC00476Q8WZB0 136 aa18.51■□□□□ 0.55
CTDNEP1-210ENST00000574322 RPL18AQ02543 176 aaKnown RBP18.49■□□□□ 0.55
CTDNEP1-210ENST00000574322 GAGE2EQ4V326 116 aa18.49■□□□□ 0.55
CTDNEP1-210ENST00000574322 GAGE2DQ9UEU5 116 aa18.49■□□□□ 0.55
CTDNEP1-210ENST00000574322 LECT2O14960 151 aa18.48■□□□□ 0.55
CTDNEP1-210ENST00000574322 PSCAO43653 123 aa18.46■□□□□ 0.55
CTDNEP1-210ENST00000574322 C9orf129Q5T035 196 aaKnown RBP18.46■□□□□ 0.55
CTDNEP1-210ENST00000574322 M0R378 163 aa18.44■□□□□ 0.54
CTDNEP1-210ENST00000574322 PLA2G2DQ9UNK4 145 aa18.44■□□□□ 0.54
CTDNEP1-210ENST00000574322 CNBPP62633 177 aaKnown RBP18.43■□□□□ 0.54
CTDNEP1-210ENST00000574322 VPS13DQ5THJ4 4388 aa18.43■□□□□ 0.54
CTDNEP1-210ENST00000574322 C14orf177Q52M58 125 aa18.43■□□□□ 0.54
CTDNEP1-210ENST00000574322 PPDPFLQ8WWR9 84 aa18.43■□□□□ 0.54
CTDNEP1-210ENST00000574322 ALMS1Q8TCU4 4167 aa18.42■□□□□ 0.54
CTDNEP1-210ENST00000574322 A0A087WYN8 130 aa18.42■□□□□ 0.54
CTDNEP1-210ENST00000574322 A0A1B0GX51 115 aa18.42■□□□□ 0.54
CTDNEP1-210ENST00000574322 TRBV10-3A0A0K0K1G6 114 aa18.41■□□□□ 0.54
CTDNEP1-210ENST00000574322 LCE6AA0A183 80 aa18.41■□□□□ 0.54
CTDNEP1-210ENST00000574322 J3QR89 54 aa18.41■□□□□ 0.54
CTDNEP1-210ENST00000574322 C6orf99Q4VX62 202 aa18.4■□□□□ 0.54
CTDNEP1-210ENST00000574322 Q6ZRN7 208 aaPredicted RBP18.4■□□□□ 0.54
CTDNEP1-210ENST00000574322 LOC107984640A0A0U1RRK4 108 aa18.39■□□□□ 0.53
CTDNEP1-210ENST00000574322 CBY1Q9Y3M2 126 aa18.36■□□□□ 0.53
CTDNEP1-210ENST00000574322 IGLV5-37A0A075B6J1 123 aa18.35■□□□□ 0.53
CTDNEP1-210ENST00000574322 TRAV23DV6A0A075B6W5 121 aa18.35■□□□□ 0.53
CTDNEP1-210ENST00000574322 LRCOL1A6NCL2 159 aa18.35■□□□□ 0.53
CTDNEP1-210ENST00000574322 DNAL4O96015 105 aa18.35■□□□□ 0.53
CTDNEP1-210ENST00000574322 BAALC-AS2P0C853 105 aa18.35■□□□□ 0.53
CTDNEP1-210ENST00000574322 LINC00167Q96N53 147 aa18.35■□□□□ 0.53
CTDNEP1-210ENST00000574322 KMT2CQ8NEZ4 4911 aaKnown RBP18.33■□□□□ 0.52
CTDNEP1-210ENST00000574322 DNAH10Q8IVF4 4471 aa18.32■□□□□ 0.52
CTDNEP1-210ENST00000574322 TRBV7-6A0A0J9YX20 115 aa18.32■□□□□ 0.52
CTDNEP1-210ENST00000574322 SERTAD4-AS1Q5TG53 156 aa18.32■□□□□ 0.52
CTDNEP1-210ENST00000574322 Q8N814 137 aa18.31■□□□□ 0.52
CTDNEP1-210ENST00000574322 SACSQ9NZJ4 4579 aa18.31■□□□□ 0.52
CTDNEP1-210ENST00000574322 ZNF73O43830 326 aaPredicted RBP18.29■□□□□ 0.52
CTDNEP1-210ENST00000574322 LINC00575Q6W349 94 aa18.29■□□□□ 0.52
CTDNEP1-210ENST00000574322 Q6ZR54 194 aa18.29■□□□□ 0.52
CTDNEP1-210ENST00000574322 NKAPP1Q8N9T2 125 aa18.29■□□□□ 0.52
CTDNEP1-210ENST00000574322 DIRC1Q969H9 104 aa18.29■□□□□ 0.52
CTDNEP1-210ENST00000574322 C22orf24Q9Y442 160 aa18.29■□□□□ 0.52
CTDNEP1-210ENST00000574322 GAGE2BQ13066 116 aa18.29■□□□□ 0.52
CTDNEP1-210ENST00000574322 TEX49A0A1B0GTD5 131 aa18.27■□□□□ 0.52
CTDNEP1-210ENST00000574322 SNCGO76070 127 aa18.26■□□□□ 0.51
CTDNEP1-210ENST00000574322 M0R2N4 97 aa18.25■□□□□ 0.51
CTDNEP1-210ENST00000574322 C7orf33Q8WU49 177 aa18.25■□□□□ 0.51
CTDNEP1-210ENST00000574322 KMT2AQ03164 3969 aa18.25■□□□□ 0.51
CTDNEP1-210ENST00000574322 C16orf90A8MZG2 172 aa18.24■□□□□ 0.51
CTDNEP1-210ENST00000574322 KCNQ1DNQ9H478 68 aa18.24■□□□□ 0.51
CTDNEP1-210ENST00000574322 KRTAP7-1Q8IUC3 87 aa18.23■□□□□ 0.51
CTDNEP1-210ENST00000574322 ORMDL1Q9P0S3 153 aa18.23■□□□□ 0.51
CTDNEP1-210ENST00000574322 ELOF1P60002 83 aaKnown RBP18.22■□□□□ 0.51
CTDNEP1-210ENST00000574322 HYDINQ4G0P3 5121 aa18.21■□□□□ 0.51
CTDNEP1-210ENST00000574322 FAM168BA1KXE4 195 aa18.21■□□□□ 0.51
CTDNEP1-210ENST00000574322 VPS25Q9BRG1 176 aa18.2■□□□□ 0.5
CTDNEP1-210ENST00000574322 hADV29S1A0JD25 119 aa18.2■□□□□ 0.5
CTDNEP1-210ENST00000574322 COX7BP24311 80 aa18.2■□□□□ 0.5
CTDNEP1-210ENST00000574322 C9orf163Q8N9P6 203 aa18.2■□□□□ 0.5
CTDNEP1-210ENST00000574322 IGLV2-33A0A075B6J2 118 aaPredicted RBP18.19■□□□□ 0.5
CTDNEP1-210ENST00000574322 PKIGQ9Y2B9 76 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms