RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 SND1-IT1Q9HBX3 110 aa10.68□□□□□ -0.7
CLDN7-207ENST00000574070 PKHD1L1Q86WI1 4243 aa10.68□□□□□ -0.7
CLDN7-207ENST00000574070 J3QQQ9 107 aa10.67□□□□□ -0.7
CLDN7-207ENST00000574070 LINC00587B1AMM8 73 aa10.66□□□□□ -0.7
CLDN7-207ENST00000574070 S100A6P06703 90 aa10.66□□□□□ -0.7
CLDN7-207ENST00000574070 SMIM13P0DJ93 91 aa10.66□□□□□ -0.7
CLDN7-207ENST00000574070 TSPEAR-AS2P59090 65 aa10.66□□□□□ -0.7
CLDN7-207ENST00000574070 LINC01545Q5VT33 79 aa10.66□□□□□ -0.7
CLDN7-207ENST00000574070 MRPL55Q7Z7F7 128 aaKnown RBP10.66□□□□□ -0.7
CLDN7-207ENST00000574070 PLA2G2DQ9UNK4 145 aa10.66□□□□□ -0.7
CLDN7-207ENST00000574070 C20orf202A1L168 122 aa10.65□□□□□ -0.7
CLDN7-207ENST00000574070 S100A2P29034 98 aa10.65□□□□□ -0.7
CLDN7-207ENST00000574070 KRTAP11-1Q8IUC1 163 aa10.65□□□□□ -0.7
CLDN7-207ENST00000574070 TP73-AS1Q9UF72 201 aa10.65□□□□□ -0.7
CLDN7-207ENST00000574070 GAGE10A6NGK3 116 aa10.64□□□□□ -0.71
CLDN7-207ENST00000574070 RPL24P83731 157 aaKnown RBP10.64□□□□□ -0.71
CLDN7-207ENST00000574070 SPINK6Q6UWN8 80 aa10.64□□□□□ -0.71
CLDN7-207ENST00000574070 E9PLD3 99 aa10.63□□□□□ -0.71
CLDN7-207ENST00000574070 NMUP48645 174 aa10.63□□□□□ -0.71
CLDN7-207ENST00000574070 OXTP01178 125 aa10.62□□□□□ -0.71
CLDN7-207ENST00000574070 MIR7-3HGQ8N6C7 128 aa10.62□□□□□ -0.71
CLDN7-207ENST00000574070 LINC00167Q96N53 147 aa10.62□□□□□ -0.71
CLDN7-207ENST00000574070 IGLV5-37A0A075B6J1 123 aa10.61□□□□□ -0.71
CLDN7-207ENST00000574070 RPL37AP8A6NKH3 93 aa10.61□□□□□ -0.71
CLDN7-207ENST00000574070 IGLV7-43P04211 117 aa10.61□□□□□ -0.71
CLDN7-207ENST00000574070 HIST3H2BBQ8N257 126 aa10.6□□□□□ -0.71
CLDN7-207ENST00000574070 VPREB1P12018 145 aa10.59□□□□□ -0.71
CLDN7-207ENST00000574070 SRSF9Q13242 221 aaKnown RBP eCLIP10.59□□□□□ -0.71
CLDN7-207ENST00000574070 REG3GQ6UW15 175 aa10.58□□□□□ -0.72
CLDN7-207ENST00000574070 FAT3Q8TDW7 4589 aa10.58□□□□□ -0.72
CLDN7-207ENST00000574070 BOD1L2Q8IYS8 172 aa10.57□□□□□ -0.72
CLDN7-207ENST00000574070 DAND5Q8N907 189 aa10.57□□□□□ -0.72
CLDN7-207ENST00000574070 HIST1H2BLQ99880 126 aa10.57□□□□□ -0.72
CLDN7-207ENST00000574070 IGKV2-28A0A075B6P5 120 aa10.56□□□□□ -0.72
CLDN7-207ENST00000574070 IGKV2D-28P01615 120 aa10.56□□□□□ -0.72
CLDN7-207ENST00000574070 ATOH7Q8N100 152 aa10.56□□□□□ -0.72
CLDN7-207ENST00000574070 LRP1Q07954 4544 aaKnown RBP10.55□□□□□ -0.72
CLDN7-207ENST00000574070 AKR1D1P51857 326 aa10.55□□□□□ -0.72
CLDN7-207ENST00000574070 SNRPEP62304 92 aaKnown RBP10.55□□□□□ -0.72
CLDN7-207ENST00000574070 MIEN1Q9BRT3 115 aa10.55□□□□□ -0.72
CLDN7-207ENST00000574070 A0A0J9YXY3 114 aa10.54□□□□□ -0.72
CLDN7-207ENST00000574070 Q8NDZ9 215 aa10.54□□□□□ -0.72
CLDN7-207ENST00000574070 DIRC1Q969H9 104 aa10.54□□□□□ -0.72
CLDN7-207ENST00000574070 IGKV2D-26A0A0A0MRZ7 120 aa10.53□□□□□ -0.72
CLDN7-207ENST00000574070 ZNF815PA8K554 130 aa10.53□□□□□ -0.72
CLDN7-207ENST00000574070 BCE1O60756 84 aa10.53□□□□□ -0.72
CLDN7-207ENST00000574070 M0R378 163 aa10.52□□□□□ -0.73
CLDN7-207ENST00000574070 NCR3O14931 201 aa10.52□□□□□ -0.73
CLDN7-207ENST00000574070 IGLV1-50A0A075B6I6 118 aa10.51□□□□□ -0.73
CLDN7-207ENST00000574070 ZNF861PO60384 105 aa10.51□□□□□ -0.73
CLDN7-207ENST00000574070 NPC2P61916 151 aa10.51□□□□□ -0.73
CLDN7-207ENST00000574070 H0Y9J4 135 aa10.5□□□□□ -0.73
CLDN7-207ENST00000574070 UBE2AP49459 152 aa10.5□□□□□ -0.73
CLDN7-207ENST00000574070 ANKRD39Q53RE8 183 aa10.5□□□□□ -0.73
CLDN7-207ENST00000574070 TTTY13Q9BZ97 58 aa10.5□□□□□ -0.73
CLDN7-207ENST00000574070 RPL28P46779 137 aaKnown RBP10.49□□□□□ -0.73
CLDN7-207ENST00000574070 C5orf52A6NGY3 159 aa10.48□□□□□ -0.73
CLDN7-207ENST00000574070 TMEM238C9JI98 176 aa10.48□□□□□ -0.73
CLDN7-207ENST00000574070 LINC01600Q96MT4 127 aa10.48□□□□□ -0.73
CLDN7-207ENST00000574070 ADAMTSL4-AS1Q5T5F5 129 aa10.47□□□□□ -0.73
CLDN7-207ENST00000574070 SCGB1D4Q6XE38 83 aa10.47□□□□□ -0.73
CLDN7-207ENST00000574070 FAM19A1Q7Z5A9 133 aa10.47□□□□□ -0.73
CLDN7-207ENST00000574070 TMEM126AQ9H061 195 aa10.47□□□□□ -0.73
CLDN7-207ENST00000574070 HSBP1L1C9JCN9 74 aa10.46□□□□□ -0.73
CLDN7-207ENST00000574070 LOC107984156A0A0G2JMH3 177 aa10.45□□□□□ -0.74
CLDN7-207ENST00000574070 TIMM17BO60830 172 aa10.45□□□□□ -0.74
CLDN7-207ENST00000574070 SCGB1D1O95968 90 aa10.45□□□□□ -0.74
CLDN7-207ENST00000574070 S100A12P80511 92 aa10.45□□□□□ -0.74
CLDN7-207ENST00000574070 ARL17AQ8IVW1 177 aa10.45□□□□□ -0.74
CLDN7-207ENST00000574070 MT1HL1P0DM35 61 aa10.43□□□□□ -0.74
CLDN7-207ENST00000574070 PRLHP81277 87 aa10.43□□□□□ -0.74
CLDN7-207ENST00000574070 SOSTDC1Q6X4U4 206 aa10.43□□□□□ -0.74
CLDN7-207ENST00000574070 SPANXB1Q9NS25 103 aaPredicted RBP10.43□□□□□ -0.74
CLDN7-207ENST00000574070 TRBV10-3A0A0K0K1G6 114 aa10.42□□□□□ -0.74
CLDN7-207ENST00000574070 PRYO14603 147 aa10.42□□□□□ -0.74
CLDN7-207ENST00000574070 NDUFC2O95298 119 aa10.42□□□□□ -0.74
CLDN7-207ENST00000574070 S100A7L2Q5SY68 101 aa10.42□□□□□ -0.74
CLDN7-207ENST00000574070 PCP2Q8IVA1 136 aa10.42□□□□□ -0.74
CLDN7-207ENST00000574070 LINC00308Q8TCZ7 52 aa10.42□□□□□ -0.74
CLDN7-207ENST00000574070 LITAFQ99732 161 aa10.42□□□□□ -0.74
CLDN7-207ENST00000574070 TRBV10-2A0A0K0K1G8 114 aa10.41□□□□□ -0.74
CLDN7-207ENST00000574070 DDTP30046 118 aa10.41□□□□□ -0.74
CLDN7-207ENST00000574070 RNF213Q63HN8 5207 aa10.4□□□□□ -0.74
CLDN7-207ENST00000574070 EIF4EBP3O60516 100 aaPredicted RBP10.39□□□□□ -0.75
CLDN7-207ENST00000574070 KRTAP13-1Q8IUC0 172 aa10.38□□□□□ -0.75
CLDN7-207ENST00000574070 PRR26Q8N8Z3 221 aa10.38□□□□□ -0.75
CLDN7-207ENST00000574070 KCNQ1DNQ9H478 68 aa10.38□□□□□ -0.75
CLDN7-207ENST00000574070 SPANXCQ9NY87 97 aa10.38□□□□□ -0.75
CLDN7-207ENST00000574070 ETDCA0A1B0GVM5 59 aa10.37□□□□□ -0.75
CLDN7-207ENST00000574070 KRTAP10-8P60410 259 aa10.37□□□□□ -0.75
CLDN7-207ENST00000574070 HIGD2AQ9BW72 106 aa10.37□□□□□ -0.75
CLDN7-207ENST00000574070 SPANXDQ9BXN6 97 aa10.37□□□□□ -0.75
CLDN7-207ENST00000574070 TNXBP22105 4242 aa10.36□□□□□ -0.75
CLDN7-207ENST00000574070 KRTAP1-4P0C5Y4 121 aa10.36□□□□□ -0.75
CLDN7-207ENST00000574070 COPS9Q8WXC6 57 aa10.36□□□□□ -0.75
CLDN7-207ENST00000574070 OR13C6PQ8NH95 151 aa10.35□□□□□ -0.75
CLDN7-207ENST00000574070 TMA7Q9Y2S6 64 aaKnown RBP10.35□□□□□ -0.75
CLDN7-207ENST00000574070 LINC00337Q8N6G1 96 aa10.34□□□□□ -0.75
CLDN7-207ENST00000574070 TRAV23DV6A0A075B6W5 121 aa10.33□□□□□ -0.76
CLDN7-207ENST00000574070 IGLV6-57P01721 117 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms