RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 LINC00304Q8N9R0 145 aa12.34□□□□□ -0.43
CHRNB1-206ENST00000574054 M0R378 163 aa12.33□□□□□ -0.44
CHRNB1-206ENST00000574054 LINC00158P58513 81 aa12.33□□□□□ -0.44
CHRNB1-206ENST00000574054 CHTOPQ9Y3Y2 248 aaKnown RBP12.33□□□□□ -0.44
CHRNB1-206ENST00000574054 RETNLBQ9BQ08 111 aa12.31□□□□□ -0.44
CHRNB1-206ENST00000574054 A0A0U1RRA0 63 aa12.3□□□□□ -0.44
CHRNB1-206ENST00000574054 CBLN2Q8IUK8 224 aa12.3□□□□□ -0.44
CHRNB1-206ENST00000574054 SNAPINO95295 136 aa12.29□□□□□ -0.44
CHRNB1-206ENST00000574054 NDUFA5Q16718 116 aa12.29□□□□□ -0.44
CHRNB1-206ENST00000574054 SVBPQ8N300 66 aa12.28□□□□□ -0.44
CHRNB1-206ENST00000574054 HIGD2AQ9BW72 106 aa12.28□□□□□ -0.44
CHRNB1-206ENST00000574054 TMEM223A0PJW6 202 aa12.27□□□□□ -0.45
CHRNB1-206ENST00000574054 PLEKHB2Q96CS7 222 aa12.27□□□□□ -0.45
CHRNB1-206ENST00000574054 ATP6V1G1O75348 118 aa12.26□□□□□ -0.45
CHRNB1-206ENST00000574054 IFI27L1Q96BM0 104 aa12.26□□□□□ -0.45
CHRNB1-206ENST00000574054 CHCHD1Q96BP2 118 aaKnown RBP12.25□□□□□ -0.45
CHRNB1-206ENST00000574054 TRAV12-1A0A0B4J245 112 aa12.24□□□□□ -0.45
CHRNB1-206ENST00000574054 A0A0U1RQV1 116 aa12.24□□□□□ -0.45
CHRNB1-206ENST00000574054 SMIM13P0DJ93 91 aa12.23□□□□□ -0.45
CHRNB1-206ENST00000574054 MEIG1Q5JSS6 88 aa12.23□□□□□ -0.45
CHRNB1-206ENST00000574054 C3orf22Q8N5N4 141 aa12.23□□□□□ -0.45
CHRNB1-206ENST00000574054 BOD1L2Q8IYS8 172 aa12.21□□□□□ -0.45
CHRNB1-206ENST00000574054 NCR3O14931 201 aa12.2□□□□□ -0.46
CHRNB1-206ENST00000574054 YPEL4Q96NS1 127 aa12.2□□□□□ -0.46
CHRNB1-206ENST00000574054 MIR7-3HGQ8N6C7 128 aa12.19□□□□□ -0.46
CHRNB1-206ENST00000574054 SPRR4Q96PI1 79 aa12.19□□□□□ -0.46
CHRNB1-206ENST00000574054 IGLV7-46A0A075B6I9 117 aa12.18□□□□□ -0.46
CHRNB1-206ENST00000574054 H0Y8G0 127 aa12.18□□□□□ -0.46
CHRNB1-206ENST00000574054 PRYO14603 147 aa12.18□□□□□ -0.46
CHRNB1-206ENST00000574054 CDIP1Q9H305 208 aa12.18□□□□□ -0.46
CHRNB1-206ENST00000574054 HSBP1O75506 76 aa12.17□□□□□ -0.46
CHRNB1-206ENST00000574054 HERV-K104P63124 156 aa12.17□□□□□ -0.46
CHRNB1-206ENST00000574054 FAM19A2Q8N3H0 131 aa12.17□□□□□ -0.46
CHRNB1-206ENST00000574054 NDUFA12Q9UI09 145 aa12.17□□□□□ -0.46
CHRNB1-206ENST00000574054 ZNF706Q9Y5V0 76 aaPredicted RBP12.17□□□□□ -0.46
CHRNB1-206ENST00000574054 CTAG1AP78358 180 aa12.16□□□□□ -0.46
CHRNB1-206ENST00000574054 ETDCA0A1B0GVM5 59 aa12.14□□□□□ -0.47
CHRNB1-206ENST00000574054 TPRXLQ17RH7 258 aa12.14□□□□□ -0.47
CHRNB1-206ENST00000574054 MYMXA0A1B0GTQ4 84 aa12.13□□□□□ -0.47
CHRNB1-206ENST00000574054 LINC00587B1AMM8 73 aa12.13□□□□□ -0.47
CHRNB1-206ENST00000574054 C4orf48Q5BLP8 95 aa12.12□□□□□ -0.47
CHRNB1-206ENST00000574054 SPAG11AQ6PDA7 123 aa12.12□□□□□ -0.47
CHRNB1-206ENST00000574054 LINC00337Q8N6G1 96 aa12.12□□□□□ -0.47
CHRNB1-206ENST00000574054 MAP1LC3CQ9BXW4 147 aa12.12□□□□□ -0.47
CHRNB1-206ENST00000574054 KCNQ1DNQ9H478 68 aa12.12□□□□□ -0.47
CHRNB1-206ENST00000574054 TRBV10-3A0A0K0K1G6 114 aa12.11□□□□□ -0.47
CHRNB1-206ENST00000574054 SMCR5Q8TEV8 140 aa12.11□□□□□ -0.47
CHRNB1-206ENST00000574054 PPDPFQ9H3Y8 114 aa12.11□□□□□ -0.47
CHRNB1-206ENST00000574054 SPRR1AP35321 89 aa12.1□□□□□ -0.47
CHRNB1-206ENST00000574054 TSPEAR-AS2P59090 65 aa12.09□□□□□ -0.47
CHRNB1-206ENST00000574054 DAND5Q8N907 189 aa12.09□□□□□ -0.47
CHRNB1-206ENST00000574054 Q8NBF4 154 aa12.09□□□□□ -0.47
CHRNB1-206ENST00000574054 S100A12P80511 92 aa12.08□□□□□ -0.48
CHRNB1-206ENST00000574054 FAT4Q6V0I7 4981 aa12.08□□□□□ -0.48
CHRNB1-206ENST00000574054 KRTAP4-16G5E9R7 235 aaPredicted RBP12.07□□□□□ -0.48
CHRNB1-206ENST00000574054 LEPROTL1O95214 131 aa12.07□□□□□ -0.48
CHRNB1-206ENST00000574054 TRGC2P03986 189 aa12.07□□□□□ -0.48
CHRNB1-206ENST00000574054 LEPROTO15243 131 aa12.06□□□□□ -0.48
CHRNB1-206ENST00000574054 SERF1AO75920 110 aa12.06□□□□□ -0.48
CHRNB1-206ENST00000574054 PLNP26678 52 aa12.05□□□□□ -0.48
CHRNB1-206ENST00000574054 MUC17Q685J3 4493 aa12.05□□□□□ -0.48
CHRNB1-206ENST00000574054 J3QQQ9 107 aa12.03□□□□□ -0.48
CHRNB1-206ENST00000574054 DDTP30046 118 aa12.03□□□□□ -0.48
CHRNB1-206ENST00000574054 LINC00310P59036 64 aa12.03□□□□□ -0.48
CHRNB1-206ENST00000574054 HERVK_113P61574 105 aa12.03□□□□□ -0.48
CHRNB1-206ENST00000574054 GAGE2AQ6NT46 116 aa12.03□□□□□ -0.48
CHRNB1-206ENST00000574054 B5MCH6 92 aa12.02□□□□□ -0.49
CHRNB1-206ENST00000574054 DPM2O94777 84 aa12.02□□□□□ -0.49
CHRNB1-206ENST00000574054 FABP4P15090 132 aa12.02□□□□□ -0.49
CHRNB1-206ENST00000574054 FP248Q71RG6 208 aaPredicted RBP12.02□□□□□ -0.49
CHRNB1-206ENST00000574054 PMCHL2Q9BQD1 86 aa12.02□□□□□ -0.49
CHRNB1-206ENST00000574054 HSPB8Q9UJY1 196 aa12.02□□□□□ -0.49
CHRNB1-206ENST00000574054 LINC00483Q53H64 154 aa12.01□□□□□ -0.49
CHRNB1-206ENST00000574054 MIEN1Q9BRT3 115 aa12.01□□□□□ -0.49
CHRNB1-206ENST00000574054 TRBV10-2A0A0K0K1G8 114 aa12□□□□□ -0.49
CHRNB1-206ENST00000574054 ERC2-IT1O76042 136 aa12□□□□□ -0.49
CHRNB1-206ENST00000574054 LGALS3P17931 250 aaKnown RBP12□□□□□ -0.49
CHRNB1-206ENST00000574054 IGLV9-49A0A0B4J1Y8 123 aa11.99□□□□□ -0.49
CHRNB1-206ENST00000574054 LOC107984156A0A0G2JMH3 177 aa11.99□□□□□ -0.49
CHRNB1-206ENST00000574054 NMUP48645 174 aa11.99□□□□□ -0.49
CHRNB1-206ENST00000574054 ARL17AQ8IVW1 177 aa11.99□□□□□ -0.49
CHRNB1-206ENST00000574054 SPANXB1Q9NS25 103 aaPredicted RBP11.99□□□□□ -0.49
CHRNB1-206ENST00000574054 SPINK1P00995 79 aa11.98□□□□□ -0.49
CHRNB1-206ENST00000574054 MOBPQ13875 183 aa11.98□□□□□ -0.49
CHRNB1-206ENST00000574054 IGKCP01834 107 aa11.97□□□□□ -0.49
CHRNB1-206ENST00000574054 S100A7L2Q5SY68 101 aa11.97□□□□□ -0.49
CHRNB1-206ENST00000574054 Q9BRP9 147 aa11.96□□□□□ -0.49
CHRNB1-206ENST00000574054 LCE2AQ5TA79 106 aaPredicted RBP11.95□□□□□ -0.5
CHRNB1-206ENST00000574054 Q6ZRX8 168 aa11.95□□□□□ -0.5
CHRNB1-206ENST00000574054 NDUFC2O95298 119 aa11.93□□□□□ -0.5
CHRNB1-206ENST00000574054 IGLV6-57P01721 117 aa11.93□□□□□ -0.5
CHRNB1-206ENST00000574054 NPC2P61916 151 aa11.93□□□□□ -0.5
CHRNB1-206ENST00000574054 KRTAP13-3Q3SY46 172 aa11.93□□□□□ -0.5
CHRNB1-206ENST00000574054 TRAV23DV6A0A075B6W5 121 aa11.92□□□□□ -0.5
CHRNB1-206ENST00000574054 SSBP3-AS1Q7Z2R9 100 aa11.91□□□□□ -0.5
CHRNB1-206ENST00000574054 SOSTDC1Q6X4U4 206 aa11.9□□□□□ -0.5
CHRNB1-206ENST00000574054 A0A0J9YXY3 114 aa11.89□□□□□ -0.51
CHRNB1-206ENST00000574054 JOSD1Q15040 202 aaPredicted RBP11.89□□□□□ -0.51
CHRNB1-206ENST00000574054 KRTAP9-2Q9BYQ4 174 aa11.89□□□□□ -0.51
CHRNB1-206ENST00000574054 EIF4EBP3O60516 100 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms