RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 PSCAO43653 123 aa19.08■□□□□ 0.64
CTDNEP1-208ENST00000573600 SMIM11BQ8TCY0 68 aa19.07■□□□□ 0.64
CTDNEP1-208ENST00000573600 PRR3P79522 188 aaKnown RBP19.06■□□□□ 0.64
CTDNEP1-208ENST00000573600 TMEM126AQ9H061 195 aa19.06■□□□□ 0.64
CTDNEP1-208ENST00000573600 XAGE1AQ9HD64 81 aa19.05■□□□□ 0.64
CTDNEP1-208ENST00000573600 PLECQ15149 4684 aaKnown RBP19.05■□□□□ 0.64
CTDNEP1-208ENST00000573600 LST1O00453 97 aa19.05■□□□□ 0.64
CTDNEP1-208ENST00000573600 TLX1NBP0CAT3 122 aa19.05■□□□□ 0.64
CTDNEP1-208ENST00000573600 Q8NDZ9 215 aa19.05■□□□□ 0.64
CTDNEP1-208ENST00000573600 TRBV10-2A0A0K0K1G8 114 aa19.04■□□□□ 0.64
CTDNEP1-208ENST00000573600 CLEC2BQ92478 149 aa19.04■□□□□ 0.64
CTDNEP1-208ENST00000573600 NCR3O14931 201 aa19.03■□□□□ 0.64
CTDNEP1-208ENST00000573600 LECT2O14960 151 aa19.03■□□□□ 0.64
CTDNEP1-208ENST00000573600 SLPIP03973 132 aa19.03■□□□□ 0.64
CTDNEP1-208ENST00000573600 WFDC2Q14508 124 aa19.03■□□□□ 0.64
CTDNEP1-208ENST00000573600 LINC01620Q4KN68 170 aa19.03■□□□□ 0.64
CTDNEP1-208ENST00000573600 MTURNQ8N3F0 131 aa19.03■□□□□ 0.64
CTDNEP1-208ENST00000573600 Q6ZRP5 223 aa19.02■□□□□ 0.63
CTDNEP1-208ENST00000573600 GAGE2EQ4V326 116 aa19■□□□□ 0.63
CTDNEP1-208ENST00000573600 S100A7L2Q5SY68 101 aa19■□□□□ 0.63
CTDNEP1-208ENST00000573600 GAGE2DQ9UEU5 116 aa19■□□□□ 0.63
CTDNEP1-208ENST00000573600 C9JAW5 83 aa18.99■□□□□ 0.63
CTDNEP1-208ENST00000573600 LYSTQ99698 3801 aa18.99■□□□□ 0.63
CTDNEP1-208ENST00000573600 H0YGX0 51 aa18.98■□□□□ 0.63
CTDNEP1-208ENST00000573600 C14orf177Q52M58 125 aa18.98■□□□□ 0.63
CTDNEP1-208ENST00000573600 STARD9Q9P2P6 4700 aa18.98■□□□□ 0.63
CTDNEP1-208ENST00000573600 SMCPP49901 116 aaPredicted RBP18.97■□□□□ 0.63
CTDNEP1-208ENST00000573600 SLC25A20O43772 301 aa18.95■□□□□ 0.62
CTDNEP1-208ENST00000573600 RPL18AQ02543 176 aaKnown RBP18.95■□□□□ 0.62
CTDNEP1-208ENST00000573600 M0QXV9 152 aa18.94■□□□□ 0.62
CTDNEP1-208ENST00000573600 VPREB1P12018 145 aa18.94■□□□□ 0.62
CTDNEP1-208ENST00000573600 WWC2-AS2Q96NR7 200 aa18.94■□□□□ 0.62
CTDNEP1-208ENST00000573600 IGLV6-57P01721 117 aa18.93■□□□□ 0.62
CTDNEP1-208ENST00000573600 TRACP01848 142 aa18.93■□□□□ 0.62
CTDNEP1-208ENST00000573600 CNBPP62633 177 aaKnown RBP18.91■□□□□ 0.62
CTDNEP1-208ENST00000573600 C9orf129Q5T035 196 aaKnown RBP18.91■□□□□ 0.62
CTDNEP1-208ENST00000573600 LOC107984640A0A0U1RRK4 108 aa18.9■□□□□ 0.62
CTDNEP1-208ENST00000573600 ETDBQ3ZM63 59 aa18.9■□□□□ 0.62
CTDNEP1-208ENST00000573600 LINC01600Q96MT4 127 aa18.9■□□□□ 0.62
CTDNEP1-208ENST00000573600 OCIAD2Q56VL3 154 aa18.89■□□□□ 0.61
CTDNEP1-208ENST00000573600 M0R378 163 aa18.88■□□□□ 0.61
CTDNEP1-208ENST00000573600 Q6ZRN7 208 aaPredicted RBP18.88■□□□□ 0.61
CTDNEP1-208ENST00000573600 FAM218AQ96MZ4 157 aa18.88■□□□□ 0.61
CTDNEP1-208ENST00000573600 ANKRD29Q8N6D5 301 aa18.88■□□□□ 0.61
CTDNEP1-208ENST00000573600 PLA2G2DQ9UNK4 145 aa18.87■□□□□ 0.61
CTDNEP1-208ENST00000573600 H3BT86 120 aa18.86■□□□□ 0.61
CTDNEP1-208ENST00000573600 VPS13DQ5THJ4 4388 aa18.86■□□□□ 0.61
CTDNEP1-208ENST00000573600 M0R2N4 97 aa18.85■□□□□ 0.61
CTDNEP1-208ENST00000573600 TRBV10-3A0A0K0K1G6 114 aa18.84■□□□□ 0.61
CTDNEP1-208ENST00000573600 LRCOL1A6NCL2 159 aa18.84■□□□□ 0.61
CTDNEP1-208ENST00000573600 K7ERU9 68 aa18.83■□□□□ 0.61
CTDNEP1-208ENST00000573600 CBY1Q9Y3M2 126 aa18.83■□□□□ 0.61
CTDNEP1-208ENST00000573600 TEN1Q86WV5 123 aa18.83■□□□□ 0.6
CTDNEP1-208ENST00000573600 TENM2Q9NT68 2774 aa18.82■□□□□ 0.6
CTDNEP1-208ENST00000573600 GAGE2BQ13066 116 aa18.82■□□□□ 0.6
CTDNEP1-208ENST00000573600 C6orf99Q4VX62 202 aa18.82■□□□□ 0.6
CTDNEP1-208ENST00000573600 Q6ZR54 194 aa18.81■□□□□ 0.6
CTDNEP1-208ENST00000573600 NKAPP1Q8N9T2 125 aa18.8■□□□□ 0.6
CTDNEP1-208ENST00000573600 TRAV23DV6A0A075B6W5 121 aa18.8■□□□□ 0.6
CTDNEP1-208ENST00000573600 A0A087WYN8 130 aa18.8■□□□□ 0.6
CTDNEP1-208ENST00000573600 A0A1B0GX51 115 aa18.8■□□□□ 0.6
CTDNEP1-208ENST00000573600 DNAL4O96015 105 aa18.78■□□□□ 0.6
CTDNEP1-208ENST00000573600 IGLV5-37A0A075B6J1 123 aa18.77■□□□□ 0.59
CTDNEP1-208ENST00000573600 IGLV2-33A0A075B6J2 118 aaPredicted RBP18.77■□□□□ 0.59
CTDNEP1-208ENST00000573600 SERTAD4-AS1Q5TG53 156 aa18.77■□□□□ 0.59
CTDNEP1-208ENST00000573600 DNAH10Q8IVF4 4471 aa18.75■□□□□ 0.59
CTDNEP1-208ENST00000573600 DIRC1Q969H9 104 aa18.74■□□□□ 0.59
CTDNEP1-208ENST00000573600 PKIGQ9Y2B9 76 aa18.74■□□□□ 0.59
CTDNEP1-208ENST00000573600 SNCGO76070 127 aa18.74■□□□□ 0.59
CTDNEP1-208ENST00000573600 C3orf84H3BNL1 204 aa18.73■□□□□ 0.59
CTDNEP1-208ENST00000573600 J3QR89 54 aa18.73■□□□□ 0.59
CTDNEP1-208ENST00000573600 LY6G6CO95867 125 aa18.73■□□□□ 0.59
CTDNEP1-208ENST00000573600 PPDPFLQ8WWR9 84 aa18.73■□□□□ 0.59
CTDNEP1-208ENST00000573600 C16orf90A8MZG2 172 aa18.72■□□□□ 0.59
CTDNEP1-208ENST00000573600 ZNF73O43830 326 aaPredicted RBP18.72■□□□□ 0.59
CTDNEP1-208ENST00000573600 BAALC-AS2P0C853 105 aa18.71■□□□□ 0.59
CTDNEP1-208ENST00000573600 TRBV7-6A0A0J9YX20 115 aa18.7■□□□□ 0.58
CTDNEP1-208ENST00000573600 C7orf33Q8WU49 177 aa18.7■□□□□ 0.58
CTDNEP1-208ENST00000573600 Q8N814 137 aa18.69■□□□□ 0.58
CTDNEP1-208ENST00000573600 C9orf163Q8N9P6 203 aa18.69■□□□□ 0.58
CTDNEP1-208ENST00000573600 LINC00476Q8WZB0 136 aa18.69■□□□□ 0.58
CTDNEP1-208ENST00000573600 FAM168BA1KXE4 195 aa18.68■□□□□ 0.58
CTDNEP1-208ENST00000573600 LINC00575Q6W349 94 aa18.68■□□□□ 0.58
CTDNEP1-208ENST00000573600 A0A096LNI7 61 aa18.67■□□□□ 0.58
CTDNEP1-208ENST00000573600 LINC00167Q96N53 147 aa18.67■□□□□ 0.58
CTDNEP1-208ENST00000573600 A0A087WTM6 91 aa18.66■□□□□ 0.58
CTDNEP1-208ENST00000573600 KCNQ1DNQ9H478 68 aa18.66■□□□□ 0.58
CTDNEP1-208ENST00000573600 C1orf134Q5TEV5 83 aa18.65■□□□□ 0.58
CTDNEP1-208ENST00000573600 C22orf24Q9Y442 160 aa18.64■□□□□ 0.57
CTDNEP1-208ENST00000573600 COX7BP24311 80 aa18.63■□□□□ 0.57
CTDNEP1-208ENST00000573600 KRTAP7-1Q8IUC3 87 aa18.63■□□□□ 0.57
CTDNEP1-208ENST00000573600 FAM19A5Q7Z5A7 132 aaPredicted RBP18.63■□□□□ 0.57
CTDNEP1-208ENST00000573600 ORMDL1Q9P0S3 153 aa18.63■□□□□ 0.57
CTDNEP1-208ENST00000573600 ELOF1P60002 83 aaKnown RBP18.62■□□□□ 0.57
CTDNEP1-208ENST00000573600 hADV29S1A0JD25 119 aa18.61■□□□□ 0.57
CTDNEP1-208ENST00000573600 MRPL55Q7Z7F7 128 aaKnown RBP18.61■□□□□ 0.57
CTDNEP1-208ENST00000573600 IGKV2-24A0A0C4DH68 120 aa18.6■□□□□ 0.57
CTDNEP1-208ENST00000573600 TEX49A0A1B0GTD5 131 aa18.6■□□□□ 0.57
CTDNEP1-208ENST00000573600 IGLV1-50A0A075B6I6 118 aa18.59■□□□□ 0.57
CTDNEP1-208ENST00000573600 PRYO14603 147 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms