RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 LECT2O14960 151 aa13.46□□□□□ -0.25
CHRNE-202ENST00000572438 CARD19Q96LW7 228 aa13.46□□□□□ -0.25
CHRNE-202ENST00000572438 RNF151Q2KHN1 245 aa13.46□□□□□ -0.26
CHRNE-202ENST00000572438 PSCAO43653 123 aa13.45□□□□□ -0.26
CHRNE-202ENST00000572438 SLPIP03973 132 aa13.45□□□□□ -0.26
CHRNE-202ENST00000572438 Q8NDZ9 215 aa13.45□□□□□ -0.26
CHRNE-202ENST00000572438 PRR3P79522 188 aaKnown RBP13.44□□□□□ -0.26
CHRNE-202ENST00000572438 XAGE1AQ9HD64 81 aa13.44□□□□□ -0.26
CHRNE-202ENST00000572438 OR13C6PQ8NH95 151 aa13.43□□□□□ -0.26
CHRNE-202ENST00000572438 RPL28P46779 137 aaKnown RBP13.43□□□□□ -0.26
CHRNE-202ENST00000572438 WFDC2Q14508 124 aa13.42□□□□□ -0.26
CHRNE-202ENST00000572438 WWC2-AS2Q96NR7 200 aa13.41□□□□□ -0.26
CHRNE-202ENST00000572438 ATXN8Q156A1 80 aa13.41□□□□□ -0.26
CHRNE-202ENST00000572438 Q6ZRP5 223 aa13.41□□□□□ -0.26
CHRNE-202ENST00000572438 NCR3O14931 201 aa13.4□□□□□ -0.26
CHRNE-202ENST00000572438 SMIM11BQ8TCY0 68 aa13.4□□□□□ -0.26
CHRNE-202ENST00000572438 DNAH10Q8IVF4 4471 aa13.4□□□□□ -0.26
CHRNE-202ENST00000572438 F8W1H4 67 aa13.39□□□□□ -0.27
CHRNE-202ENST00000572438 TLX1NBP0CAT3 122 aa13.39□□□□□ -0.27
CHRNE-202ENST00000572438 GAGE2EQ4V326 116 aa13.39□□□□□ -0.27
CHRNE-202ENST00000572438 GAGE2DQ9UEU5 116 aa13.39□□□□□ -0.27
CHRNE-202ENST00000572438 CLEC2BQ92478 149 aa13.39□□□□□ -0.27
CHRNE-202ENST00000572438 PRO0461Q9UI25 63 aa13.39□□□□□ -0.27
CHRNE-202ENST00000572438 TMEM126AQ9H061 195 aa13.38□□□□□ -0.27
CHRNE-202ENST00000572438 TRBV10-2A0A0K0K1G8 114 aa13.37□□□□□ -0.27
CHRNE-202ENST00000572438 MTURNQ8N3F0 131 aa13.36□□□□□ -0.27
CHRNE-202ENST00000572438 C14orf177Q52M58 125 aa13.36□□□□□ -0.27
CHRNE-202ENST00000572438 M0R2N4 97 aa13.35□□□□□ -0.27
CHRNE-202ENST00000572438 LST1O00453 97 aa13.35□□□□□ -0.27
CHRNE-202ENST00000572438 RPL18AQ02543 176 aaKnown RBP13.35□□□□□ -0.27
CHRNE-202ENST00000572438 Q6ZRN7 208 aaPredicted RBP13.35□□□□□ -0.27
CHRNE-202ENST00000572438 S100A7L2Q5SY68 101 aa13.34□□□□□ -0.27
CHRNE-202ENST00000572438 VPREB1P12018 145 aa13.34□□□□□ -0.27
CHRNE-202ENST00000572438 CNBPP62633 177 aaKnown RBP13.34□□□□□ -0.27
CHRNE-202ENST00000572438 LINC01620Q4KN68 170 aa13.34□□□□□ -0.27
CHRNE-202ENST00000572438 C9orf129Q5T035 196 aaKnown RBP13.34□□□□□ -0.27
CHRNE-202ENST00000572438 LRCOL1A6NCL2 159 aa13.32□□□□□ -0.28
CHRNE-202ENST00000572438 IGLV6-57P01721 117 aa13.32□□□□□ -0.28
CHRNE-202ENST00000572438 C9JAW5 83 aa13.31□□□□□ -0.28
CHRNE-202ENST00000572438 Q6ZR54 194 aa13.31□□□□□ -0.28
CHRNE-202ENST00000572438 LOC107984640A0A0U1RRK4 108 aa13.3□□□□□ -0.28
CHRNE-202ENST00000572438 SMCPP49901 116 aaPredicted RBP13.3□□□□□ -0.28
CHRNE-202ENST00000572438 H0YGX0 51 aa13.29□□□□□ -0.28
CHRNE-202ENST00000572438 M0R378 163 aa13.28□□□□□ -0.28
CHRNE-202ENST00000572438 FAM218AQ96MZ4 157 aa13.28□□□□□ -0.28
CHRNE-202ENST00000572438 SLC25A20O43772 301 aa13.27□□□□□ -0.28
CHRNE-202ENST00000572438 TRBV10-3A0A0K0K1G6 114 aa13.27□□□□□ -0.29
CHRNE-202ENST00000572438 GAGE2BQ13066 116 aa13.27□□□□□ -0.29
CHRNE-202ENST00000572438 PLA2G2DQ9UNK4 145 aa13.27□□□□□ -0.29
CHRNE-202ENST00000572438 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.26□□□□□ -0.29
CHRNE-202ENST00000572438 LY6G6CO95867 125 aa13.26□□□□□ -0.29
CHRNE-202ENST00000572438 TRACP01848 142 aa13.26□□□□□ -0.29
CHRNE-202ENST00000572438 C3orf84H3BNL1 204 aa13.25□□□□□ -0.29
CHRNE-202ENST00000572438 LINC00476Q8WZB0 136 aa13.25□□□□□ -0.29
CHRNE-202ENST00000572438 M0QXV9 152 aa13.24□□□□□ -0.29
CHRNE-202ENST00000572438 ETDBQ3ZM63 59 aa13.24□□□□□ -0.29
CHRNE-202ENST00000572438 SERTAD4-AS1Q5TG53 156 aa13.24□□□□□ -0.29
CHRNE-202ENST00000572438 C6orf99Q4VX62 202 aa13.23□□□□□ -0.29
CHRNE-202ENST00000572438 ANKRD29Q8N6D5 301 aa13.23□□□□□ -0.29
CHRNE-202ENST00000572438 NKAPP1Q8N9T2 125 aa13.23□□□□□ -0.29
CHRNE-202ENST00000572438 TRAV23DV6A0A075B6W5 121 aa13.22□□□□□ -0.29
CHRNE-202ENST00000572438 A0A087WYN8 130 aa13.22□□□□□ -0.29
CHRNE-202ENST00000572438 LINC01600Q96MT4 127 aa13.22□□□□□ -0.29
CHRNE-202ENST00000572438 Q8N814 137 aa13.2□□□□□ -0.3
CHRNE-202ENST00000572438 IGLV5-37A0A075B6J1 123 aa13.2□□□□□ -0.3
CHRNE-202ENST00000572438 H3BT86 120 aa13.2□□□□□ -0.3
CHRNE-202ENST00000572438 OCIAD2Q56VL3 154 aa13.2□□□□□ -0.3
CHRNE-202ENST00000572438 FAM168BA1KXE4 195 aa13.19□□□□□ -0.3
CHRNE-202ENST00000572438 C16orf90A8MZG2 172 aa13.19□□□□□ -0.3
CHRNE-202ENST00000572438 ALMS1Q8TCU4 4167 aa13.19□□□□□ -0.3
CHRNE-202ENST00000572438 DNAH2Q9P225 4427 aa13.19□□□□□ -0.3
CHRNE-202ENST00000572438 A0A087WTM6 91 aa13.18□□□□□ -0.3
CHRNE-202ENST00000572438 CBY1Q9Y3M2 126 aa13.18□□□□□ -0.3
CHRNE-202ENST00000572438 A0A096LNI7 61 aa13.18□□□□□ -0.3
CHRNE-202ENST00000572438 C1orf134Q5TEV5 83 aa13.18□□□□□ -0.3
CHRNE-202ENST00000572438 TEN1Q86WV5 123 aa13.18□□□□□ -0.3
CHRNE-202ENST00000572438 C9orf163Q8N9P6 203 aa13.18□□□□□ -0.3
CHRNE-202ENST00000572438 C7orf33Q8WU49 177 aa13.18□□□□□ -0.3
CHRNE-202ENST00000572438 DNAH6Q9C0G6 4158 aa13.17□□□□□ -0.3
CHRNE-202ENST00000572438 KMT2AQ03164 3969 aa13.17□□□□□ -0.3
CHRNE-202ENST00000572438 KRTAP7-1Q8IUC3 87 aa13.17□□□□□ -0.3
CHRNE-202ENST00000572438 DIRC1Q969H9 104 aa13.17□□□□□ -0.3
CHRNE-202ENST00000572438 ZNF73O43830 326 aaPredicted RBP13.16□□□□□ -0.3
CHRNE-202ENST00000572438 DNAL4O96015 105 aa13.16□□□□□ -0.3
CHRNE-202ENST00000572438 A0A1B0GX51 115 aa13.16□□□□□ -0.3
CHRNE-202ENST00000572438 PKIGQ9Y2B9 76 aa13.16□□□□□ -0.3
CHRNE-202ENST00000572438 FAM19A5Q7Z5A7 132 aaPredicted RBP13.14□□□□□ -0.31
CHRNE-202ENST00000572438 IGKV2-24A0A0C4DH68 120 aa13.13□□□□□ -0.31
CHRNE-202ENST00000572438 C22orf24Q9Y442 160 aa13.13□□□□□ -0.31
CHRNE-202ENST00000572438 K7ERU9 68 aa13.13□□□□□ -0.31
CHRNE-202ENST00000572438 TRBV7-6A0A0J9YX20 115 aa13.12□□□□□ -0.31
CHRNE-202ENST00000572438 BAALC-AS2P0C853 105 aa13.12□□□□□ -0.31
CHRNE-202ENST00000572438 LINC00575Q6W349 94 aa13.12□□□□□ -0.31
CHRNE-202ENST00000572438 KCNQ1DNQ9H478 68 aa13.12□□□□□ -0.31
CHRNE-202ENST00000572438 SNCGO76070 127 aa13.1□□□□□ -0.31
CHRNE-202ENST00000572438 SDIM1Q6ZPB5 146 aa13.1□□□□□ -0.31
CHRNE-202ENST00000572438 MRPL55Q7Z7F7 128 aaKnown RBP13.1□□□□□ -0.31
CHRNE-202ENST00000572438 PPDPFLQ8WWR9 84 aa13.1□□□□□ -0.31
CHRNE-202ENST00000572438 LINC00167Q96N53 147 aa13.1□□□□□ -0.31
CHRNE-202ENST00000572438 COX7BP24311 80 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms