RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 NDUFC1O43677 76 aa6.19□□□□□ -1.42
TVP23A-205ENST00000572428 ADAMTSL4-AS1Q5T5F5 129 aa6.19□□□□□ -1.42
TVP23A-205ENST00000572428 KIF25-AS1Q9Y6Z4 181 aa6.19□□□□□ -1.42
TVP23A-205ENST00000572428 ANK2Q01484 3957 aa6.18□□□□□ -1.42
TVP23A-205ENST00000572428 IGHV3-16A0A0C4DH30 117 aa6.18□□□□□ -1.42
TVP23A-205ENST00000572428 HCG22E2RYF7 251 aa6.18□□□□□ -1.42
TVP23A-205ENST00000572428 IGLV9-49A0A0B4J1Y8 123 aa6.18□□□□□ -1.42
TVP23A-205ENST00000572428 NANOS2P60321 138 aaKnown RBP6.18□□□□□ -1.42
TVP23A-205ENST00000572428 NBEAL2Q6ZNJ1 2754 aa6.18□□□□□ -1.42
TVP23A-205ENST00000572428 TENM1Q9UKZ4 2725 aa6.18□□□□□ -1.42
TVP23A-205ENST00000572428 IGHV3-64A0A075B6Q5 118 aa6.17□□□□□ -1.42
TVP23A-205ENST00000572428 TMEM141Q96I45 108 aa6.17□□□□□ -1.42
TVP23A-205ENST00000572428 LRCOL1A6NCL2 159 aa6.17□□□□□ -1.42
TVP23A-205ENST00000572428 LINC00315P59091 139 aa6.17□□□□□ -1.42
TVP23A-205ENST00000572428 SEC61BP60468 96 aaKnown RBP6.17□□□□□ -1.42
TVP23A-205ENST00000572428 TRAV7A0A075B6U4 112 aa6.17□□□□□ -1.42
TVP23A-205ENST00000572428 SPINK13Q1W4C9 94 aa6.17□□□□□ -1.42
TVP23A-205ENST00000572428 Q5VV11 94 aa6.17□□□□□ -1.42
TVP23A-205ENST00000572428 TRAV12-1A0A0B4J245 112 aa6.16□□□□□ -1.42
TVP23A-205ENST00000572428 SDHAF1A6NFY7 115 aa6.16□□□□□ -1.42
TVP23A-205ENST00000572428 TMEM263Q8WUH6 116 aaKnown RBP6.16□□□□□ -1.42
TVP23A-205ENST00000572428 RPL39LQ96EH5 51 aaKnown RBP6.16□□□□□ -1.42
TVP23A-205ENST00000572428 LEPROTO15243 131 aa6.16□□□□□ -1.42
TVP23A-205ENST00000572428 DEFB131AP59861 70 aa6.16□□□□□ -1.42
TVP23A-205ENST00000572428 KRTAP21-3Q3LHN1 58 aa6.16□□□□□ -1.42
TVP23A-205ENST00000572428 TRBV6-5A0A0K0K1A5 114 aa6.16□□□□□ -1.42
TVP23A-205ENST00000572428 IGHV3-30P01768 117 aa6.16□□□□□ -1.42
TVP23A-205ENST00000572428 IGHV3-30-5P0DP03 117 aa6.16□□□□□ -1.42
TVP23A-205ENST00000572428 LINC00467Q9BRT7 94 aa6.15□□□□□ -1.42
TVP23A-205ENST00000572428 TRBV30A0A0K0K1B3 111 aa6.15□□□□□ -1.43
TVP23A-205ENST00000572428 EGFEM1PQ0D2K5 195 aa6.15□□□□□ -1.43
TVP23A-205ENST00000572428 PLNP26678 52 aa6.14□□□□□ -1.43
TVP23A-205ENST00000572428 POLR2KP53803 58 aaKnown RBP6.14□□□□□ -1.43
TVP23A-205ENST00000572428 SUMO4Q6EEV6 95 aa6.14□□□□□ -1.43
TVP23A-205ENST00000572428 SCGB3A1Q96QR1 104 aa6.14□□□□□ -1.43
TVP23A-205ENST00000572428 DNAH3Q8TD57 4116 aa6.14□□□□□ -1.43
TVP23A-205ENST00000572428 Q6ZTC4 211 aa6.14□□□□□ -1.43
TVP23A-205ENST00000572428 hDV103S1A0JD37 113 aa6.13□□□□□ -1.43
TVP23A-205ENST00000572428 Q1RN00 199 aa6.13□□□□□ -1.43
TVP23A-205ENST00000572428 C2orf66Q6UXQ4 117 aa6.13□□□□□ -1.43
TVP23A-205ENST00000572428 SCXQ7RTU7 201 aa6.13□□□□□ -1.43
TVP23A-205ENST00000572428 F8VRH5 84 aa6.12□□□□□ -1.43
TVP23A-205ENST00000572428 ZNF815PA8K554 130 aa6.12□□□□□ -1.43
TVP23A-205ENST00000572428 RNASE13Q5GAN3 156 aaKnown RBP6.12□□□□□ -1.43
TVP23A-205ENST00000572428 M0QY20 66 aa6.12□□□□□ -1.43
TVP23A-205ENST00000572428 RETNLBQ9BQ08 111 aa6.11□□□□□ -1.43
TVP23A-205ENST00000572428 INSP01308 110 aa6.11□□□□□ -1.43
TVP23A-205ENST00000572428 ATRQ13535 2644 aa6.11□□□□□ -1.43
TVP23A-205ENST00000572428 A0A0J9YY99 117 aa6.1□□□□□ -1.43
TVP23A-205ENST00000572428 LINC00846Q9NV44 126 aa6.1□□□□□ -1.43
TVP23A-205ENST00000572428 TRRAPQ9Y4A5 3859 aa6.1□□□□□ -1.43
TVP23A-205ENST00000572428 VWFP04275 2813 aa6.1□□□□□ -1.43
TVP23A-205ENST00000572428 C3orf84H3BNL1 204 aa6.1□□□□□ -1.43
TVP23A-205ENST00000572428 CDK2AP2O75956 126 aa6.1□□□□□ -1.43
TVP23A-205ENST00000572428 RPL39P62891 51 aaKnown RBP6.1□□□□□ -1.43
TVP23A-205ENST00000572428 KPRPQ5T749 579 aaPredicted RBP6.09□□□□□ -1.43
TVP23A-205ENST00000572428 IGIPA6NJ69 53 aa6.09□□□□□ -1.43
TVP23A-205ENST00000572428 GIG44P09565 113 aaPredicted RBP6.09□□□□□ -1.43
TVP23A-205ENST00000572428 I3L3M4 83 aa6.08□□□□□ -1.44
TVP23A-205ENST00000572428 MOBPQ13875 183 aa6.08□□□□□ -1.44
TVP23A-205ENST00000572428 C22orf24Q9Y442 160 aa6.08□□□□□ -1.44
TVP23A-205ENST00000572428 CHKB-CPT1BH3BT56 60 aa6.08□□□□□ -1.44
TVP23A-205ENST00000572428 C20orf203Q8NBC4 194 aa6.08□□□□□ -1.44
TVP23A-205ENST00000572428 CSNK1G2-AS1Q8NCQ2 148 aa6.08□□□□□ -1.44
TVP23A-205ENST00000572428 IGKV3OR2-268A0A0C4DH90 116 aa6.08□□□□□ -1.44
TVP23A-205ENST00000572428 KRTAP10-11P60412 298 aa6.08□□□□□ -1.44
TVP23A-205ENST00000572428 IGHV3-38A0A0C4DH36 116 aa6.07□□□□□ -1.44
TVP23A-205ENST00000572428 ICOSQ9Y6W8 199 aa6.07□□□□□ -1.44
TVP23A-205ENST00000572428 IGHV3-53P01767 116 aa6.07□□□□□ -1.44
TVP23A-205ENST00000572428 TRBV7-4A0A0J9YYF1 115 aa6.07□□□□□ -1.44
TVP23A-205ENST00000572428 BCE1O60756 84 aa6.07□□□□□ -1.44
TVP23A-205ENST00000572428 TSHBP01222 138 aa6.06□□□□□ -1.44
TVP23A-205ENST00000572428 LINC00476Q8WZB0 136 aa6.06□□□□□ -1.44
TVP23A-205ENST00000572428 WFDC10AQ9H1F0 79 aa6.06□□□□□ -1.44
TVP23A-205ENST00000572428 Q8N814 137 aa6.04□□□□□ -1.44
TVP23A-205ENST00000572428 IGLV4-69A0A075B6H9 119 aa6.04□□□□□ -1.44
TVP23A-205ENST00000572428 C9orf116Q5BN46 136 aaPredicted RBP6.04□□□□□ -1.44
TVP23A-205ENST00000572428 LINC00242Q5T6M2 205 aa6.04□□□□□ -1.44
TVP23A-205ENST00000572428 C11orf86A6NJI1 115 aa6.03□□□□□ -1.44
TVP23A-205ENST00000572428 STAB1Q9NY15 2570 aa6.03□□□□□ -1.44
TVP23A-205ENST00000572428 ZNF625Q96I27 306 aaPredicted RBP6.03□□□□□ -1.44
TVP23A-205ENST00000572428 DNAL4O96015 105 aa6.02□□□□□ -1.45
TVP23A-205ENST00000572428 IGHV4-30-4P0DP06 118 aa6.02□□□□□ -1.45
TVP23A-205ENST00000572428 ENHOQ6UWT2 76 aa6.02□□□□□ -1.45
TVP23A-205ENST00000572428 TRAV10A0A0B4J240 114 aa6.02□□□□□ -1.45
TVP23A-205ENST00000572428 C1orf64Q8NEQ6 169 aa6.02□□□□□ -1.45
TVP23A-205ENST00000572428 COX6CP09669 75 aa6.01□□□□□ -1.45
TVP23A-205ENST00000572428 IGLV4-3A0A075B6K6 122 aa6.01□□□□□ -1.45
TVP23A-205ENST00000572428 TRBV10-1A0A0K0K1A3 114 aa6.01□□□□□ -1.45
TVP23A-205ENST00000572428 COL6A5A8TX70 2615 aa6.01□□□□□ -1.45
TVP23A-205ENST00000572428 C16orf74Q96GX8 76 aa6.01□□□□□ -1.45
TVP23A-205ENST00000572428 CDC42SE1Q9NRR8 79 aa6.01□□□□□ -1.45
TVP23A-205ENST00000572428 PSCAO43653 123 aa6□□□□□ -1.45
TVP23A-205ENST00000572428 RPL36AP83881 106 aaKnown RBP6□□□□□ -1.45
TVP23A-205ENST00000572428 C1orf134Q5TEV5 83 aa6□□□□□ -1.45
TVP23A-205ENST00000572428 NOTCH2NLQ7Z3S9 236 aa6□□□□□ -1.45
TVP23A-205ENST00000572428 AMELXQ99217 191 aa6□□□□□ -1.45
TVP23A-205ENST00000572428 Q6ZSN1 163 aa6□□□□□ -1.45
TVP23A-205ENST00000572428 TMEM254Q8TBM7 123 aa6□□□□□ -1.45
TVP23A-205ENST00000572428 TRGV1A0A0A0MS02 117 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms