RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 IGIPA6NJ69 53 aa6.86□□□□□ -1.31
CCDC40-208ENST00000572270 LCE2BO14633 110 aa6.86□□□□□ -1.31
CCDC40-208ENST00000572270 SPINK8P0C7L1 97 aa6.86□□□□□ -1.31
CCDC40-208ENST00000572270 Q8NDZ9 215 aa6.86□□□□□ -1.31
CCDC40-208ENST00000572270 PRELID3AQ96N28 172 aa6.86□□□□□ -1.31
CCDC40-208ENST00000572270 ORMDL2Q53FV1 153 aa6.85□□□□□ -1.31
CCDC40-208ENST00000572270 TMEM136Q6ZRR5 245 aa6.85□□□□□ -1.31
CCDC40-208ENST00000572270 MAP1LC3AQ9H492 121 aa6.85□□□□□ -1.31
CCDC40-208ENST00000572270 ERG28Q9UKR5 140 aa6.85□□□□□ -1.31
CCDC40-208ENST00000572270 COX17Q14061 63 aa6.84□□□□□ -1.31
CCDC40-208ENST00000572270 MRPL54Q6P161 138 aaKnown RBP6.84□□□□□ -1.31
CCDC40-208ENST00000572270 TINCRA0A1B0GVN0 87 aa6.83□□□□□ -1.32
CCDC40-208ENST00000572270 IGLV5-45A0A087WSX0 123 aa6.82□□□□□ -1.32
CCDC40-208ENST00000572270 SMIM27A0A1W2PRY6 76 aa6.82□□□□□ -1.32
CCDC40-208ENST00000572270 PRSS47A8MTI9 375 aa6.81□□□□□ -1.32
CCDC40-208ENST00000572270 SPRR1AP35321 89 aa6.81□□□□□ -1.32
CCDC40-208ENST00000572270 Q8N8P6 123 aa6.81□□□□□ -1.32
CCDC40-208ENST00000572270 LAMTOR2Q9Y2Q5 125 aa6.8□□□□□ -1.32
CCDC40-208ENST00000572270 H3BRM9 83 aa6.79□□□□□ -1.32
CCDC40-208ENST00000572270 G0S2P27469 103 aa6.79□□□□□ -1.32
CCDC40-208ENST00000572270 MRPL18Q9H0U6 180 aaKnown RBP6.79□□□□□ -1.32
CCDC40-208ENST00000572270 A0A1B0GXF2 115 aa6.78□□□□□ -1.32
CCDC40-208ENST00000572270 K7EMI3 77 aa6.78□□□□□ -1.32
CCDC40-208ENST00000572270 ERC2-IT1O76042 136 aa6.78□□□□□ -1.32
CCDC40-208ENST00000572270 S100A12P80511 92 aa6.78□□□□□ -1.32
CCDC40-208ENST00000572270 HRCT1Q6UXD1 115 aa6.78□□□□□ -1.32
CCDC40-208ENST00000572270 KCNQ1DNQ9H478 68 aa6.78□□□□□ -1.32
CCDC40-208ENST00000572270 BATF3Q9NR55 127 aa6.78□□□□□ -1.32
CCDC40-208ENST00000572270 TRAV9-1A0A075B6T8 112 aa6.77□□□□□ -1.33
CCDC40-208ENST00000572270 MT2AP02795 61 aa6.77□□□□□ -1.33
CCDC40-208ENST00000572270 ZNF625Q96I27 306 aaPredicted RBP6.77□□□□□ -1.33
CCDC40-208ENST00000572270 B5MCH6 92 aa6.75□□□□□ -1.33
CCDC40-208ENST00000572270 NCR3O14931 201 aa6.75□□□□□ -1.33
CCDC40-208ENST00000572270 RPL23P62829 140 aaKnown RBP6.75□□□□□ -1.33
CCDC40-208ENST00000572270 ADIRFQ15847 76 aa6.75□□□□□ -1.33
CCDC40-208ENST00000572270 KRTAP19-6Q3LI70 58 aa6.75□□□□□ -1.33
CCDC40-208ENST00000572270 TOMM6Q96B49 74 aa6.75□□□□□ -1.33
CCDC40-208ENST00000572270 SCGB3A1Q96QR1 104 aa6.75□□□□□ -1.33
CCDC40-208ENST00000572270 KRTAP20-1Q3LI63 56 aa6.74□□□□□ -1.33
CCDC40-208ENST00000572270 ERASQ7Z444 233 aa6.74□□□□□ -1.33
CCDC40-208ENST00000572270 KRTAP9-3Q9BYQ3 159 aa6.74□□□□□ -1.33
CCDC40-208ENST00000572270 C20orf202A1L168 122 aa6.73□□□□□ -1.33
CCDC40-208ENST00000572270 LINC00158P58513 81 aa6.73□□□□□ -1.33
CCDC40-208ENST00000572270 BLOC1S1P78537 153 aa6.73□□□□□ -1.33
CCDC40-208ENST00000572270 SFTA2Q6UW10 78 aa6.73□□□□□ -1.33
CCDC40-208ENST00000572270 NXT2Q9NPJ8 142 aaKnown RBP6.73□□□□□ -1.33
CCDC40-208ENST00000572270 IGLV5-39A0A0G2JS06 123 aa6.72□□□□□ -1.33
CCDC40-208ENST00000572270 MT1FP04733 61 aa6.72□□□□□ -1.33
CCDC40-208ENST00000572270 KRTAP10-10P60014 251 aa6.72□□□□□ -1.33
CCDC40-208ENST00000572270 ATP5L2Q7Z4Y8 100 aa6.72□□□□□ -1.33
CCDC40-208ENST00000572270 SLC51BQ86UW2 128 aa6.72□□□□□ -1.33
CCDC40-208ENST00000572270 Q9BRP9 147 aa6.72□□□□□ -1.33
CCDC40-208ENST00000572270 TRBV10-3A0A0K0K1G6 114 aa6.71□□□□□ -1.34
CCDC40-208ENST00000572270 KIAA1644Q3SXP7 199 aa6.71□□□□□ -1.34
CCDC40-208ENST00000572270 BOD1L2Q8IYS8 172 aa6.71□□□□□ -1.34
CCDC40-208ENST00000572270 CST9LQ9H4G1 147 aa6.71□□□□□ -1.34
CCDC40-208ENST00000572270 SRP19P09132 144 aaKnown RBP6.7□□□□□ -1.34
CCDC40-208ENST00000572270 PMVKQ15126 192 aa6.7□□□□□ -1.34
CCDC40-208ENST00000572270 Q6ZRX8 168 aa6.7□□□□□ -1.34
CCDC40-208ENST00000572270 ADCYAP1P18509 176 aa6.69□□□□□ -1.34
CCDC40-208ENST00000572270 ALKAL2Q6UX46 152 aa6.69□□□□□ -1.34
CCDC40-208ENST00000572270 A0A0U1RRA0 63 aa6.68□□□□□ -1.34
CCDC40-208ENST00000572270 ATP6V1G1O75348 118 aa6.68□□□□□ -1.34
CCDC40-208ENST00000572270 NAT8Q9UHE5 227 aa6.68□□□□□ -1.34
CCDC40-208ENST00000572270 ATP11AUNQ6ZP68 121 aa6.67□□□□□ -1.34
CCDC40-208ENST00000572270 LINC01549A6NIU2 74 aa6.66□□□□□ -1.34
CCDC40-208ENST00000572270 JOSD1Q15040 202 aaPredicted RBP6.66□□□□□ -1.34
CCDC40-208ENST00000572270 CHTOPQ9Y3Y2 248 aaKnown RBP6.66□□□□□ -1.34
CCDC40-208ENST00000572270 SLC25A34Q6PIV7 304 aa6.65□□□□□ -1.34
CCDC40-208ENST00000572270 NEBP20929 6669 aa6.64□□□□□ -1.35
CCDC40-208ENST00000572270 H7C2G1 150 aa6.64□□□□□ -1.35
CCDC40-208ENST00000572270 IGLC3P0DOY3 106 aa6.64□□□□□ -1.35
CCDC40-208ENST00000572270 ZNF22P17026 224 aaPredicted RBP6.64□□□□□ -1.35
CCDC40-208ENST00000572270 CD164Q04900 197 aa6.64□□□□□ -1.35
CCDC40-208ENST00000572270 RGS21Q2M5E4 152 aa6.64□□□□□ -1.35
CCDC40-208ENST00000572270 C1orf195Q5TG92 126 aa6.64□□□□□ -1.35
CCDC40-208ENST00000572270 ST20-AS1Q8NBB2 130 aa6.64□□□□□ -1.35
CCDC40-208ENST00000572270 TRBV20-1A0A075B6N2 111 aa6.63□□□□□ -1.35
CCDC40-208ENST00000572270 DDTP30046 118 aa6.63□□□□□ -1.35
CCDC40-208ENST00000572270 C5orf52A6NGY3 159 aa6.61□□□□□ -1.35
CCDC40-208ENST00000572270 SMIM13P0DJ93 91 aa6.61□□□□□ -1.35
CCDC40-208ENST00000572270 Q5XG85 94 aa6.61□□□□□ -1.35
CCDC40-208ENST00000572270 LAMTOR3Q9UHA4 124 aa6.61□□□□□ -1.35
CCDC40-208ENST00000572270 NDUFA6P56556 154 aa6.6□□□□□ -1.35
CCDC40-208ENST00000572270 MEIG1Q5JSS6 88 aa6.6□□□□□ -1.35
CCDC40-208ENST00000572270 MIR7-3HGQ8N6C7 128 aa6.6□□□□□ -1.35
CCDC40-208ENST00000572270 LGALS3P17931 250 aaKnown RBP6.59□□□□□ -1.35
CCDC40-208ENST00000572270 FA2HQ7L5A8 372 aa6.59□□□□□ -1.35
CCDC40-208ENST00000572270 SMIM29Q86T20 159 aa6.59□□□□□ -1.35
CCDC40-208ENST00000572270 TMEM170BQ5T4T1 132 aa6.58□□□□□ -1.36
CCDC40-208ENST00000572270 PRO1933Q9H354 126 aa6.58□□□□□ -1.36
CCDC40-208ENST00000572270 MUC12Q9UKN1 5478 aa6.57□□□□□ -1.36
CCDC40-208ENST00000572270 TRBV10-2A0A0K0K1G8 114 aa6.56□□□□□ -1.36
CCDC40-208ENST00000572270 SPRR1BP22528 89 aa6.56□□□□□ -1.36
CCDC40-208ENST00000572270 C10orf91Q5T1B1 145 aa6.56□□□□□ -1.36
CCDC40-208ENST00000572270 Q75L30 129 aa6.56□□□□□ -1.36
CCDC40-208ENST00000572270 FAM236DA0A1B0GTK5 79 aa6.55□□□□□ -1.36
CCDC40-208ENST00000572270 FAM236CP0DP71 79 aa6.55□□□□□ -1.36
CCDC40-208ENST00000572270 S100A7L2Q5SY68 101 aa6.55□□□□□ -1.36
CCDC40-208ENST00000572270 C20orf166-AS1Q96NR2 134 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms