RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 IGLV5-39A0A0G2JS06 123 aa11.06□□□□□ -0.64
CCDC40-206ENST00000572083 PMVKQ15126 192 aa11.06□□□□□ -0.64
CCDC40-206ENST00000572083 ANAPC16Q96DE5 110 aa11.05□□□□□ -0.64
CCDC40-206ENST00000572083 NDUFA12Q9UI09 145 aa11.05□□□□□ -0.64
CCDC40-206ENST00000572083 COX17Q14061 63 aa11.04□□□□□ -0.64
CCDC40-206ENST00000572083 MT-ND4LP03901 98 aa11.03□□□□□ -0.64
CCDC40-206ENST00000572083 A0A1B0GVG6 124 aa11.01□□□□□ -0.65
CCDC40-206ENST00000572083 XP32Q5T750 250 aa11.01□□□□□ -0.65
CCDC40-206ENST00000572083 Q8N377 158 aa11.01□□□□□ -0.65
CCDC40-206ENST00000572083 LINC01549A6NIU2 74 aa11□□□□□ -0.65
CCDC40-206ENST00000572083 IGLC3P0DOY3 106 aa11□□□□□ -0.65
CCDC40-206ENST00000572083 MT1HP80294 61 aa11□□□□□ -0.65
CCDC40-206ENST00000572083 KRTAP19-2Q3LHN2 52 aa11□□□□□ -0.65
CCDC40-206ENST00000572083 ZNF22P17026 224 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-206ENST00000572083 FAM19A2Q8N3H0 131 aa10.99□□□□□ -0.65
CCDC40-206ENST00000572083 LINC01546A6NGU7 62 aa10.98□□□□□ -0.65
CCDC40-206ENST00000572083 SMCR5Q8TEV8 140 aa10.98□□□□□ -0.65
CCDC40-206ENST00000572083 MOBPQ13875 183 aa10.97□□□□□ -0.65
CCDC40-206ENST00000572083 IGLV9-49A0A0B4J1Y8 123 aa10.96□□□□□ -0.65
CCDC40-206ENST00000572083 PRYO14603 147 aa10.96□□□□□ -0.65
CCDC40-206ENST00000572083 NDUFA6P56556 154 aa10.96□□□□□ -0.65
CCDC40-206ENST00000572083 LINC00158P58513 81 aa10.95□□□□□ -0.66
CCDC40-206ENST00000572083 RPS29P62273 56 aaKnown RBP10.95□□□□□ -0.66
CCDC40-206ENST00000572083 LINC00483Q53H64 154 aa10.95□□□□□ -0.66
CCDC40-206ENST00000572083 GAGE2AQ6NT46 116 aa10.95□□□□□ -0.66
CCDC40-206ENST00000572083 A0A0U1RRA0 63 aa10.94□□□□□ -0.66
CCDC40-206ENST00000572083 CFC1BP0CG36 223 aa10.94□□□□□ -0.66
CCDC40-206ENST00000572083 FA2HQ7L5A8 372 aa10.93□□□□□ -0.66
CCDC40-206ENST00000572083 ETDCA0A1B0GVM5 59 aa10.92□□□□□ -0.66
CCDC40-206ENST00000572083 NCR3O14931 201 aa10.92□□□□□ -0.66
CCDC40-206ENST00000572083 SLC25A20O43772 301 aa10.92□□□□□ -0.66
CCDC40-206ENST00000572083 SPRR1AP35321 89 aa10.92□□□□□ -0.66
CCDC40-206ENST00000572083 SMCO4Q9NRQ5 59 aa10.92□□□□□ -0.66
CCDC40-206ENST00000572083 KRTAP4-16G5E9R7 235 aaPredicted RBP10.91□□□□□ -0.66
CCDC40-206ENST00000572083 SFTA2Q6UW10 78 aa10.91□□□□□ -0.66
CCDC40-206ENST00000572083 LORP23490 312 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-206ENST00000572083 TMEM170BQ5T4T1 132 aa10.89□□□□□ -0.67
CCDC40-206ENST00000572083 BOD1L2Q8IYS8 172 aa10.89□□□□□ -0.67
CCDC40-206ENST00000572083 KCNQ1DNQ9H478 68 aa10.89□□□□□ -0.67
CCDC40-206ENST00000572083 C11orf86A6NJI1 115 aa10.88□□□□□ -0.67
CCDC40-206ENST00000572083 SSBP3-AS1Q7Z2R9 100 aa10.88□□□□□ -0.67
CCDC40-206ENST00000572083 A0A096LNJ9 63 aa10.87□□□□□ -0.67
CCDC40-206ENST00000572083 ERC2-IT1O76042 136 aa10.87□□□□□ -0.67
CCDC40-206ENST00000572083 KRTAP10-6P60371 365 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-206ENST00000572083 PCOTHQ58A44 107 aa10.87□□□□□ -0.67
CCDC40-206ENST00000572083 IGLV8-61A0A075B6I0 122 aa10.86□□□□□ -0.67
CCDC40-206ENST00000572083 TRBV10-3A0A0K0K1G6 114 aa10.85□□□□□ -0.67
CCDC40-206ENST00000572083 SMIM13P0DJ93 91 aa10.85□□□□□ -0.67
CCDC40-206ENST00000572083 TRAV9-1A0A075B6T8 112 aa10.83□□□□□ -0.68
CCDC40-206ENST00000572083 B5MCH6 92 aa10.83□□□□□ -0.68
CCDC40-206ENST00000572083 ATP6V1G1O75348 118 aa10.82□□□□□ -0.68
CCDC40-206ENST00000572083 PMCHL1Q16048 86 aa10.81□□□□□ -0.68
CCDC40-206ENST00000572083 C9orf153Q5TBE3 101 aa10.81□□□□□ -0.68
CCDC40-206ENST00000572083 BAGE3Q86Y29 109 aa10.81□□□□□ -0.68
CCDC40-206ENST00000572083 MIR7-3HGQ8N6C7 128 aa10.81□□□□□ -0.68
CCDC40-206ENST00000572083 Q9BRP9 147 aa10.81□□□□□ -0.68
CCDC40-206ENST00000572083 MEIG1Q5JSS6 88 aa10.8□□□□□ -0.68
CCDC40-206ENST00000572083 FLGP20930 4061 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-206ENST00000572083 C9orf92A6NGG3 77 aa10.79□□□□□ -0.68
CCDC40-206ENST00000572083 FABP9Q0Z7S8 132 aa10.79□□□□□ -0.68
CCDC40-206ENST00000572083 HBDP02042 147 aa10.78□□□□□ -0.68
CCDC40-206ENST00000572083 URB1-AS1Q96HZ7 61 aa10.78□□□□□ -0.68
CCDC40-206ENST00000572083 M0R2T5 61 aa10.77□□□□□ -0.69
CCDC40-206ENST00000572083 S100A12P80511 92 aa10.77□□□□□ -0.69
CCDC40-206ENST00000572083 TMEM223A0PJW6 202 aa10.76□□□□□ -0.69
CCDC40-206ENST00000572083 S100PP25815 95 aa10.75□□□□□ -0.69
CCDC40-206ENST00000572083 Q6ZRX8 168 aa10.75□□□□□ -0.69
CCDC40-206ENST00000572083 CHTOPQ9Y3Y2 248 aaKnown RBP10.75□□□□□ -0.69
CCDC40-206ENST00000572083 LINC00614P0C842 121 aa10.73□□□□□ -0.69
CCDC40-206ENST00000572083 DDTP30046 118 aa10.73□□□□□ -0.69
CCDC40-206ENST00000572083 C18orf32Q8TCD1 76 aa10.72□□□□□ -0.69
CCDC40-206ENST00000572083 COX19Q49B96 90 aa10.71□□□□□ -0.69
CCDC40-206ENST00000572083 HERV-K104P63124 156 aa10.7□□□□□ -0.7
CCDC40-206ENST00000572083 HRCT1Q6UXD1 115 aa10.69□□□□□ -0.7
CCDC40-206ENST00000572083 SEC11CQ9BY50 192 aa10.69□□□□□ -0.7
CCDC40-206ENST00000572083 ST20-AS1Q8NBB2 130 aa10.68□□□□□ -0.7
CCDC40-206ENST00000572083 KRTAP9-7A8MTY7 169 aa10.67□□□□□ -0.7
CCDC40-206ENST00000572083 LIMD2Q9BT23 127 aa10.67□□□□□ -0.7
CCDC40-206ENST00000572083 MAP1LC3CQ9BXW4 147 aa10.66□□□□□ -0.7
CCDC40-206ENST00000572083 TRBV10-2A0A0K0K1G8 114 aa10.65□□□□□ -0.7
CCDC40-206ENST00000572083 LINC00587B1AMM8 73 aa10.65□□□□□ -0.7
CCDC40-206ENST00000572083 COX6B2Q6YFQ2 88 aa10.65□□□□□ -0.7
CCDC40-206ENST00000572083 IGLV6-57P01721 117 aa10.64□□□□□ -0.71
CCDC40-206ENST00000572083 MYMXA0A1B0GTQ4 84 aa10.63□□□□□ -0.71
CCDC40-206ENST00000572083 TMEM218A2RU14 115 aa10.63□□□□□ -0.71
CCDC40-206ENST00000572083 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.63□□□□□ -0.71
CCDC40-206ENST00000572083 JOSD1Q15040 202 aaPredicted RBP10.63□□□□□ -0.71
CCDC40-206ENST00000572083 SPANXB1Q9NS25 103 aaPredicted RBP10.63□□□□□ -0.71
CCDC40-206ENST00000572083 TRAV23DV6A0A075B6W5 121 aa10.62□□□□□ -0.71
CCDC40-206ENST00000572083 TRAV12-1A0A0B4J245 112 aa10.62□□□□□ -0.71
CCDC40-206ENST00000572083 S100A7L2Q5SY68 101 aa10.62□□□□□ -0.71
CCDC40-206ENST00000572083 LOC107984156A0A0G2JMH3 177 aa10.61□□□□□ -0.71
CCDC40-206ENST00000572083 ARL17AQ8IVW1 177 aa10.61□□□□□ -0.71
CCDC40-206ENST00000572083 TRAPPC1Q9Y5R8 145 aa10.61□□□□□ -0.71
CCDC40-206ENST00000572083 TSPEAR-AS2P59090 65 aa10.6□□□□□ -0.71
CCDC40-206ENST00000572083 IFI27L1Q96BM0 104 aa10.6□□□□□ -0.71
CCDC40-206ENST00000572083 ZNF73O43830 326 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-206ENST00000572083 CLLU1Q5K131 121 aa10.58□□□□□ -0.72
CCDC40-206ENST00000572083 UQCC3Q6UW78 93 aa10.58□□□□□ -0.72
CCDC40-206ENST00000572083 MIEN1Q9BRT3 115 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms