RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 PRO1933Q9H354 126 aa8.8□□□□□ -1
RPAIN-209ENST00000571558 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.8□□□□□ -1
RPAIN-209ENST00000571558 C9orf163Q8N9P6 203 aa8.8□□□□□ -1
RPAIN-209ENST00000571558 MIEN1Q9BRT3 115 aa8.8□□□□□ -1
RPAIN-209ENST00000571558 ERG28Q9UKR5 140 aa8.8□□□□□ -1
RPAIN-209ENST00000571558 TIMM17BO60830 172 aa8.79□□□□□ -1
RPAIN-209ENST00000571558 SMIM13P0DJ93 91 aa8.79□□□□□ -1
RPAIN-209ENST00000571558 COX17Q14061 63 aa8.79□□□□□ -1
RPAIN-209ENST00000571558 C2orf91Q6ZV80 131 aa8.79□□□□□ -1
RPAIN-209ENST00000571558 TLX1NBP0CAT3 122 aa8.78□□□□□ -1
RPAIN-209ENST00000571558 KRTAP10-4P60372 401 aaPredicted RBP8.78□□□□□ -1
RPAIN-209ENST00000571558 UQCR10Q9UDW1 63 aa8.78□□□□□ -1
RPAIN-209ENST00000571558 PFN2P35080 140 aa8.77□□□□□ -1.01
RPAIN-209ENST00000571558 ADAMTSL4-AS1Q5T5F5 129 aa8.77□□□□□ -1.01
RPAIN-209ENST00000571558 SCGB1D4Q6XE38 83 aa8.77□□□□□ -1.01
RPAIN-209ENST00000571558 LINC00587B1AMM8 73 aa8.76□□□□□ -1.01
RPAIN-209ENST00000571558 NDUFC2-KCTD14E9PQ53 114 aa8.76□□□□□ -1.01
RPAIN-209ENST00000571558 MEIG1Q5JSS6 88 aa8.76□□□□□ -1.01
RPAIN-209ENST00000571558 Q6ZRP5 223 aa8.76□□□□□ -1.01
RPAIN-209ENST00000571558 SCXQ7RTU7 201 aa8.76□□□□□ -1.01
RPAIN-209ENST00000571558 HIGD1BQ9P298 99 aa8.76□□□□□ -1.01
RPAIN-209ENST00000571558 FAT3Q8TDW7 4589 aa8.76□□□□□ -1.01
RPAIN-209ENST00000571558 A0A0U1RRA0 63 aa8.75□□□□□ -1.01
RPAIN-209ENST00000571558 LINC01620Q4KN68 170 aa8.75□□□□□ -1.01
RPAIN-209ENST00000571558 SDIM1Q6ZPB5 146 aa8.75□□□□□ -1.01
RPAIN-209ENST00000571558 LOC107984640A0A0U1RRK4 108 aa8.74□□□□□ -1.01
RPAIN-209ENST00000571558 LINC00158P58513 81 aa8.74□□□□□ -1.01
RPAIN-209ENST00000571558 CIRBPQ14011 172 aaKnown RBP8.74□□□□□ -1.01
RPAIN-209ENST00000571558 MIR7-3HGQ8N6C7 128 aa8.74□□□□□ -1.01
RPAIN-209ENST00000571558 DAND5Q8N907 189 aa8.74□□□□□ -1.01
RPAIN-209ENST00000571558 SPANXDQ9BXN6 97 aa8.74□□□□□ -1.01
RPAIN-209ENST00000571558 SPANXB1Q9NS25 103 aaPredicted RBP8.74□□□□□ -1.01
RPAIN-209ENST00000571558 SPANXCQ9NY87 97 aa8.74□□□□□ -1.01
RPAIN-209ENST00000571558 RNF213Q63HN8 5207 aa8.74□□□□□ -1.01
RPAIN-209ENST00000571558 TMEM238C9JI98 176 aa8.73□□□□□ -1.01
RPAIN-209ENST00000571558 A6NJY4 79 aa8.72□□□□□ -1.01
RPAIN-209ENST00000571558 EIF4EBP3O60516 100 aaPredicted RBP8.72□□□□□ -1.01
RPAIN-209ENST00000571558 LCE2AQ5TA79 106 aaPredicted RBP8.72□□□□□ -1.01
RPAIN-209ENST00000571558 SND1-IT1Q9HBX3 110 aa8.72□□□□□ -1.01
RPAIN-209ENST00000571558 LCE2CQ5TA81 110 aa8.71□□□□□ -1.01
RPAIN-209ENST00000571558 A0A096LNI7 61 aa8.71□□□□□ -1.02
RPAIN-209ENST00000571558 LOC107984156A0A0G2JMH3 177 aa8.71□□□□□ -1.02
RPAIN-209ENST00000571558 PTTG1IPP53801 180 aa8.71□□□□□ -1.02
RPAIN-209ENST00000571558 RPL18AQ02543 176 aaKnown RBP8.71□□□□□ -1.02
RPAIN-209ENST00000571558 SOSTDC1Q6X4U4 206 aa8.71□□□□□ -1.02
RPAIN-209ENST00000571558 Q6ZVH6 145 aa8.71□□□□□ -1.02
RPAIN-209ENST00000571558 ARL17AQ8IVW1 177 aa8.71□□□□□ -1.02
RPAIN-209ENST00000571558 C9orf129Q5T035 196 aaKnown RBP8.7□□□□□ -1.02
RPAIN-209ENST00000571558 CIRBP-AS1Q8TBR5 109 aa8.7□□□□□ -1.02
RPAIN-209ENST00000571558 LINC00308Q8TCZ7 52 aa8.7□□□□□ -1.02
RPAIN-209ENST00000571558 PKIGQ9Y2B9 76 aa8.7□□□□□ -1.02
RPAIN-209ENST00000571558 HNRNPA3P51991 378 aaKnown RBP8.69□□□□□ -1.02
RPAIN-209ENST00000571558 GAGE2BQ13066 116 aa8.69□□□□□ -1.02
RPAIN-209ENST00000571558 GAGE2EQ4V326 116 aa8.69□□□□□ -1.02
RPAIN-209ENST00000571558 PPDPFQ9H3Y8 114 aa8.69□□□□□ -1.02
RPAIN-209ENST00000571558 XAGE1AQ9HD64 81 aa8.69□□□□□ -1.02
RPAIN-209ENST00000571558 GAGE2DQ9UEU5 116 aa8.69□□□□□ -1.02
RPAIN-209ENST00000571558 PANO1I0J062 215 aa8.68□□□□□ -1.02
RPAIN-209ENST00000571558 IFITM1P13164 125 aa8.68□□□□□ -1.02
RPAIN-209ENST00000571558 TAL2Q16559 108 aa8.68□□□□□ -1.02
RPAIN-209ENST00000571558 LBHQ53QV2 105 aaPredicted RBP8.68□□□□□ -1.02
RPAIN-209ENST00000571558 HIST1H4GQ99525 98 aa8.68□□□□□ -1.02
RPAIN-209ENST00000571558 CHTF8P0CG12 524 aa8.67□□□□□ -1.02
RPAIN-209ENST00000571558 NPC2P61916 151 aa8.67□□□□□ -1.02
RPAIN-209ENST00000571558 SRSF9Q13242 221 aaKnown RBP eCLIP8.67□□□□□ -1.02
RPAIN-209ENST00000571558 MUSTN1Q8IVN3 82 aa8.67□□□□□ -1.02
RPAIN-209ENST00000571558 Q8NDZ9 215 aa8.67□□□□□ -1.02
RPAIN-209ENST00000571558 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.67□□□□□ -1.02
RPAIN-209ENST00000571558 IGKV2-24A0A0C4DH68 120 aa8.66□□□□□ -1.02
RPAIN-209ENST00000571558 HSD52Q0P140 79 aa8.66□□□□□ -1.02
RPAIN-209ENST00000571558 SPACA4Q8TDM5 124 aa8.66□□□□□ -1.02
RPAIN-209ENST00000571558 M0R143 59 aa8.65□□□□□ -1.02
RPAIN-209ENST00000571558 RPL37AP61513 92 aaKnown RBP8.65□□□□□ -1.02
RPAIN-209ENST00000571558 KRTAP7-1Q8IUC3 87 aa8.65□□□□□ -1.02
RPAIN-209ENST00000571558 LINC00474Q9P2X8 69 aa8.65□□□□□ -1.02
RPAIN-209ENST00000571558 FAM168BA1KXE4 195 aa8.64□□□□□ -1.03
RPAIN-209ENST00000571558 CTAG1AP78358 180 aa8.64□□□□□ -1.03
RPAIN-209ENST00000571558 CEND1Q8N111 149 aa8.63□□□□□ -1.03
RPAIN-209ENST00000571558 COPS9Q8WXC6 57 aa8.63□□□□□ -1.03
RPAIN-209ENST00000571558 LRP2P98164 4655 aa8.63□□□□□ -1.03
RPAIN-209ENST00000571558 NDUFC2O95298 119 aa8.63□□□□□ -1.03
RPAIN-209ENST00000571558 MT1HL1P0DM35 61 aa8.63□□□□□ -1.03
RPAIN-209ENST00000571558 VPREB1P12018 145 aa8.63□□□□□ -1.03
RPAIN-209ENST00000571558 IGLV5-37A0A075B6J1 123 aa8.62□□□□□ -1.03
RPAIN-209ENST00000571558 A0A1W2PNN7 141 aa8.62□□□□□ -1.03
RPAIN-209ENST00000571558 A4D1N5 150 aa8.61□□□□□ -1.03
RPAIN-209ENST00000571558 FXYD2P54710 66 aa8.61□□□□□ -1.03
RPAIN-209ENST00000571558 PRR3P79522 188 aaKnown RBP8.61□□□□□ -1.03
RPAIN-209ENST00000571558 RPL24P83731 157 aaKnown RBP8.61□□□□□ -1.03
RPAIN-209ENST00000571558 SNHG12Q9BXW3 62 aa8.61□□□□□ -1.03
RPAIN-209ENST00000571558 PKHD1L1Q86WI1 4243 aa8.6□□□□□ -1.03
RPAIN-209ENST00000571558 IGKV2-28A0A075B6P5 120 aa8.6□□□□□ -1.03
RPAIN-209ENST00000571558 IGKV2D-28P01615 120 aa8.6□□□□□ -1.03
RPAIN-209ENST00000571558 A0A087WYN8 130 aa8.59□□□□□ -1.03
RPAIN-209ENST00000571558 BVES-AS1Q5T3Y7 98 aa8.59□□□□□ -1.03
RPAIN-209ENST00000571558 FAM19A5Q7Z5A7 132 aaPredicted RBP8.59□□□□□ -1.03
RPAIN-209ENST00000571558 PLAC8Q9NZF1 115 aa8.59□□□□□ -1.03
RPAIN-209ENST00000571558 TRBV10-2A0A0K0K1G8 114 aa8.57□□□□□ -1.04
RPAIN-209ENST00000571558 HINT1P49773 126 aaPredicted RBP8.57□□□□□ -1.04
RPAIN-209ENST00000571558 C22orf24Q9Y442 160 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms