RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 TRAV13-2A0A0B4J235 113 aa7.65□□□□□ -1.18
CDRT1-206ENST00000571263 CBY1Q9Y3M2 126 aa7.65□□□□□ -1.18
CDRT1-206ENST00000571263 A0A096LNI7 61 aa7.64□□□□□ -1.19
CDRT1-206ENST00000571263 A0A0B4J2C4 111 aa7.64□□□□□ -1.19
CDRT1-206ENST00000571263 FXYD2P54710 66 aa7.64□□□□□ -1.19
CDRT1-206ENST00000571263 C9orf129Q5T035 196 aaKnown RBP7.64□□□□□ -1.19
CDRT1-206ENST00000571263 RAB37Q96AX2 223 aa7.64□□□□□ -1.19
CDRT1-206ENST00000571263 IGLV5-37A0A075B6J1 123 aa7.63□□□□□ -1.19
CDRT1-206ENST00000571263 A0A1B0GWB2 263 aa7.63□□□□□ -1.19
CDRT1-206ENST00000571263 NKAPP1Q8N9T2 125 aa7.63□□□□□ -1.19
CDRT1-206ENST00000571263 DPH3Q96FX2 82 aa7.63□□□□□ -1.19
CDRT1-206ENST00000571263 IGKV2-24A0A0C4DH68 120 aa7.62□□□□□ -1.19
CDRT1-206ENST00000571263 M0R378 163 aa7.62□□□□□ -1.19
CDRT1-206ENST00000571263 EIF4EBP3O60516 100 aaPredicted RBP7.62□□□□□ -1.19
CDRT1-206ENST00000571263 CFC1BP0CG36 223 aa7.62□□□□□ -1.19
CDRT1-206ENST00000571263 CFC1P0CG37 223 aa7.62□□□□□ -1.19
CDRT1-206ENST00000571263 KRTAP10-2P60368 255 aa7.62□□□□□ -1.19
CDRT1-206ENST00000571263 LBHQ53QV2 105 aaPredicted RBP7.62□□□□□ -1.19
CDRT1-206ENST00000571263 TMEM126AQ9H061 195 aa7.62□□□□□ -1.19
CDRT1-206ENST00000571263 NHP2Q9NX24 153 aaKnown RBP7.62□□□□□ -1.19
CDRT1-206ENST00000571263 PRO1854Q9UHT4 67 aa7.62□□□□□ -1.19
CDRT1-206ENST00000571263 KMT2AQ03164 3969 aa7.62□□□□□ -1.19
CDRT1-206ENST00000571263 VPREB1P12018 145 aa7.61□□□□□ -1.19
CDRT1-206ENST00000571263 BATFQ16520 125 aa7.61□□□□□ -1.19
CDRT1-206ENST00000571263 SNHG12Q9BXW3 62 aa7.61□□□□□ -1.19
CDRT1-206ENST00000571263 A0A1B0GVY2 172 aa7.6□□□□□ -1.19
CDRT1-206ENST00000571263 COL5A1-AS1Q5SY13 56 aa7.6□□□□□ -1.19
CDRT1-206ENST00000571263 S100A7L2Q5SY68 101 aa7.6□□□□□ -1.19
CDRT1-206ENST00000571263 SPACA4Q8TDM5 124 aa7.6□□□□□ -1.19
CDRT1-206ENST00000571263 LINC01620Q4KN68 170 aa7.59□□□□□ -1.19
CDRT1-206ENST00000571263 OR13C6PQ8NH95 151 aa7.59□□□□□ -1.19
CDRT1-206ENST00000571263 SACSQ9NZJ4 4579 aa7.59□□□□□ -1.19
CDRT1-206ENST00000571263 DNAH2Q9P225 4427 aa7.58□□□□□ -1.2
CDRT1-206ENST00000571263 IGKV2-28A0A075B6P5 120 aa7.58□□□□□ -1.2
CDRT1-206ENST00000571263 EPM2AB3EWF7 344 aa7.58□□□□□ -1.2
CDRT1-206ENST00000571263 IGKV2D-28P01615 120 aa7.58□□□□□ -1.2
CDRT1-206ENST00000571263 C22orf24Q9Y442 160 aa7.58□□□□□ -1.2
CDRT1-206ENST00000571263 DNAH17Q9UFH2 4485 aa7.57□□□□□ -1.2
CDRT1-206ENST00000571263 MRPL55Q7Z7F7 128 aaKnown RBP7.57□□□□□ -1.2
CDRT1-206ENST00000571263 DNAH10Q8IVF4 4471 aa7.56□□□□□ -1.2
CDRT1-206ENST00000571263 A0A1W2PNN7 141 aa7.56□□□□□ -1.2
CDRT1-206ENST00000571263 NCR3O14931 201 aa7.56□□□□□ -1.2
CDRT1-206ENST00000571263 IGLV6-57P01721 117 aa7.56□□□□□ -1.2
CDRT1-206ENST00000571263 CHTF8P0CG12 524 aa7.56□□□□□ -1.2
CDRT1-206ENST00000571263 PRR3P79522 188 aaKnown RBP7.56□□□□□ -1.2
CDRT1-206ENST00000571263 SERTAD4-AS1Q5TG53 156 aa7.56□□□□□ -1.2
CDRT1-206ENST00000571263 FAM19A5Q7Z5A7 132 aaPredicted RBP7.56□□□□□ -1.2
CDRT1-206ENST00000571263 LINC00337Q8N6G1 96 aa7.56□□□□□ -1.2
CDRT1-206ENST00000571263 PLAC8Q9NZF1 115 aa7.56□□□□□ -1.2
CDRT1-206ENST00000571263 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.56□□□□□ -1.2
CDRT1-206ENST00000571263 A0A087WYN8 130 aa7.55□□□□□ -1.2
CDRT1-206ENST00000571263 FAM168BA1KXE4 195 aa7.55□□□□□ -1.2
CDRT1-206ENST00000571263 M0QXV9 152 aa7.55□□□□□ -1.2
CDRT1-206ENST00000571263 FUSP35637 526 aaKnown RBP eCLIP7.55□□□□□ -1.2
CDRT1-206ENST00000571263 RPL13AP40429 203 aaKnown RBP7.55□□□□□ -1.2
CDRT1-206ENST00000571263 Q6ZSA8 131 aa7.55□□□□□ -1.2
CDRT1-206ENST00000571263 Q8NDZ9 215 aa7.55□□□□□ -1.2
CDRT1-206ENST00000571263 HYDINQ4G0P3 5121 aa7.55□□□□□ -1.2
CDRT1-206ENST00000571263 COX6CP09669 75 aa7.54□□□□□ -1.2
CDRT1-206ENST00000571263 RPL28P46779 137 aaKnown RBP7.54□□□□□ -1.2
CDRT1-206ENST00000571263 KRTAP10-1P60331 282 aa7.54□□□□□ -1.2
CDRT1-206ENST00000571263 Q1RN00 199 aa7.54□□□□□ -1.2
CDRT1-206ENST00000571263 C7orf33Q8WU49 177 aa7.54□□□□□ -1.2
CDRT1-206ENST00000571263 LINC00167Q96N53 147 aa7.54□□□□□ -1.2
CDRT1-206ENST00000571263 IGLV1-50A0A075B6I6 118 aa7.53□□□□□ -1.2
CDRT1-206ENST00000571263 K7ERJ3 54 aa7.53□□□□□ -1.2
CDRT1-206ENST00000571263 VAMP3Q15836 100 aa7.53□□□□□ -1.2
CDRT1-206ENST00000571263 KRTAP7-1Q8IUC3 87 aa7.53□□□□□ -1.2
CDRT1-206ENST00000571263 KCNQ1DNQ9H478 68 aa7.53□□□□□ -1.2
CDRT1-206ENST00000571263 TRBV10-3A0A0K0K1G6 114 aa7.52□□□□□ -1.21
CDRT1-206ENST00000571263 C9orf118A6NHY6 69 aa7.52□□□□□ -1.21
CDRT1-206ENST00000571263 PANO1I0J062 215 aa7.52□□□□□ -1.21
CDRT1-206ENST00000571263 PRYO14603 147 aa7.52□□□□□ -1.21
CDRT1-206ENST00000571263 LYRM7Q5U5X0 104 aa7.52□□□□□ -1.21
CDRT1-206ENST00000571263 TRAV23DV6A0A075B6W5 121 aa7.51□□□□□ -1.21
CDRT1-206ENST00000571263 TRBV7-6A0A0J9YX20 115 aa7.51□□□□□ -1.21
CDRT1-206ENST00000571263 PSMB2P49721 201 aa7.51□□□□□ -1.21
CDRT1-206ENST00000571263 UBE2BP63146 152 aa7.51□□□□□ -1.21
CDRT1-206ENST00000571263 GAGE10A6NGK3 116 aa7.5□□□□□ -1.21
CDRT1-206ENST00000571263 H0YGX0 51 aa7.5□□□□□ -1.21
CDRT1-206ENST00000571263 H7C2G1 150 aa7.5□□□□□ -1.21
CDRT1-206ENST00000571263 TAX1BP3O14907 124 aa7.5□□□□□ -1.21
CDRT1-206ENST00000571263 TSPAN13O95857 204 aa7.5□□□□□ -1.21
CDRT1-206ENST00000571263 SMIM11BQ8TCY0 68 aa7.5□□□□□ -1.21
CDRT1-206ENST00000571263 SNCGO76070 127 aa7.49□□□□□ -1.21
CDRT1-206ENST00000571263 PHF5AQ7RTV0 110 aaKnown RBP7.49□□□□□ -1.21
CDRT1-206ENST00000571263 CIRBP-AS1Q8TBR5 109 aa7.49□□□□□ -1.21
CDRT1-206ENST00000571263 DIRC1Q969H9 104 aa7.49□□□□□ -1.21
CDRT1-206ENST00000571263 FAM30AQ9NZY2 134 aa7.49□□□□□ -1.21
CDRT1-206ENST00000571263 RYR2Q92736 4967 aa7.48□□□□□ -1.21
CDRT1-206ENST00000571263 RPL37AP8A6NKH3 93 aa7.48□□□□□ -1.21
CDRT1-206ENST00000571263 ZNF73O43830 326 aaPredicted RBP7.48□□□□□ -1.21
CDRT1-206ENST00000571263 SCGB1C2P0DMR2 95 aa7.48□□□□□ -1.21
CDRT1-206ENST00000571263 REG3GQ6UW15 175 aa7.48□□□□□ -1.21
CDRT1-206ENST00000571263 KMT2CQ8NEZ4 4911 aaKnown RBP7.47□□□□□ -1.21
CDRT1-206ENST00000571263 H3BUT2 72 aa7.47□□□□□ -1.21
CDRT1-206ENST00000571263 SPRR1AP35321 89 aa7.47□□□□□ -1.21
CDRT1-206ENST00000571263 SCXQ7RTU7 201 aa7.47□□□□□ -1.21
CDRT1-206ENST00000571263 TRBV20-1A0A075B6N2 111 aa7.46□□□□□ -1.22
CDRT1-206ENST00000571263 FABP2P12104 132 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms