RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 MEIG1Q5JSS6 88 aa8.36□□□□□ -1.07
CCDC40-205ENST00000571028 FAM19A5Q7Z5A7 132 aaPredicted RBP8.36□□□□□ -1.07
CCDC40-205ENST00000571028 PLAC8Q9NZF1 115 aa8.36□□□□□ -1.07
CCDC40-205ENST00000571028 LINC00158P58513 81 aa8.35□□□□□ -1.07
CCDC40-205ENST00000571028 MYMXA0A1B0GTQ4 84 aa8.34□□□□□ -1.07
CCDC40-205ENST00000571028 C9orf129Q5T035 196 aaKnown RBP8.34□□□□□ -1.07
CCDC40-205ENST00000571028 E9PLD3 99 aa8.33□□□□□ -1.08
CCDC40-205ENST00000571028 SCGB1D1O95968 90 aa8.33□□□□□ -1.08
CCDC40-205ENST00000571028 SFTA2Q6UW10 78 aa8.33□□□□□ -1.08
CCDC40-205ENST00000571028 SMIM13P0DJ93 91 aa8.32□□□□□ -1.08
CCDC40-205ENST00000571028 HERV-K104P63124 156 aa8.32□□□□□ -1.08
CCDC40-205ENST00000571028 PHF5AQ7RTV0 110 aaKnown RBP8.32□□□□□ -1.08
CCDC40-205ENST00000571028 IGKV2D-26A0A0A0MRZ7 120 aa8.31□□□□□ -1.08
CCDC40-205ENST00000571028 C7orf33Q8WU49 177 aa8.31□□□□□ -1.08
CCDC40-205ENST00000571028 TTTY13Q9BZ97 58 aa8.31□□□□□ -1.08
CCDC40-205ENST00000571028 NMUP48645 174 aa8.3□□□□□ -1.08
CCDC40-205ENST00000571028 ANKRD39Q53RE8 183 aa8.3□□□□□ -1.08
CCDC40-205ENST00000571028 SND1-IT1Q9HBX3 110 aa8.3□□□□□ -1.08
CCDC40-205ENST00000571028 M0QXV9 152 aa8.29□□□□□ -1.08
CCDC40-205ENST00000571028 COX17Q14061 63 aa8.29□□□□□ -1.08
CCDC40-205ENST00000571028 TNXBP22105 4242 aa8.28□□□□□ -1.08
CCDC40-205ENST00000571028 ZNF815PA8K554 130 aa8.28□□□□□ -1.08
CCDC40-205ENST00000571028 AKR1D1P51857 326 aa8.28□□□□□ -1.08
CCDC40-205ENST00000571028 KRTAP7-1Q8IUC3 87 aa8.28□□□□□ -1.08
CCDC40-205ENST00000571028 MIR7-3HGQ8N6C7 128 aa8.28□□□□□ -1.08
CCDC40-205ENST00000571028 DAND5Q8N907 189 aa8.28□□□□□ -1.08
CCDC40-205ENST00000571028 LINC00587B1AMM8 73 aa8.27□□□□□ -1.09
CCDC40-205ENST00000571028 HSBP1L1C9JCN9 74 aa8.27□□□□□ -1.09
CCDC40-205ENST00000571028 UBE2BP63146 152 aa8.27□□□□□ -1.09
CCDC40-205ENST00000571028 A0A0J9YXY3 114 aa8.26□□□□□ -1.09
CCDC40-205ENST00000571028 GAGE10A6NGK3 116 aa8.26□□□□□ -1.09
CCDC40-205ENST00000571028 C22orf24Q9Y442 160 aa8.26□□□□□ -1.09
CCDC40-205ENST00000571028 NPC2P61916 151 aa8.25□□□□□ -1.09
CCDC40-205ENST00000571028 NKAPP1Q8N9T2 125 aa8.25□□□□□ -1.09
CCDC40-205ENST00000571028 SCGB1D4Q6XE38 83 aa8.23□□□□□ -1.09
CCDC40-205ENST00000571028 KRTAP11-1Q8IUC1 163 aa8.23□□□□□ -1.09
CCDC40-205ENST00000571028 PCP2Q8IVA1 136 aa8.23□□□□□ -1.09
CCDC40-205ENST00000571028 BOD1L2Q8IYS8 172 aa8.23□□□□□ -1.09
CCDC40-205ENST00000571028 LINC01600Q96MT4 127 aa8.23□□□□□ -1.09
CCDC40-205ENST00000571028 RPL37AP8A6NKH3 93 aa8.22□□□□□ -1.09
CCDC40-205ENST00000571028 RPL24P83731 157 aaKnown RBP8.22□□□□□ -1.09
CCDC40-205ENST00000571028 LBHQ53QV2 105 aaPredicted RBP8.22□□□□□ -1.09
CCDC40-205ENST00000571028 ADAMTSL4-AS1Q5T5F5 129 aa8.22□□□□□ -1.09
CCDC40-205ENST00000571028 MRPL55Q7Z7F7 128 aaKnown RBP8.22□□□□□ -1.09
CCDC40-205ENST00000571028 Q8NDZ9 215 aa8.22□□□□□ -1.09
CCDC40-205ENST00000571028 NCR3O14931 201 aa8.21□□□□□ -1.1
CCDC40-205ENST00000571028 VPREB1P12018 145 aa8.21□□□□□ -1.1
CCDC40-205ENST00000571028 PRR3P79522 188 aaKnown RBP8.21□□□□□ -1.1
CCDC40-205ENST00000571028 LINC00167Q96N53 147 aa8.21□□□□□ -1.1
CCDC40-205ENST00000571028 MIEN1Q9BRT3 115 aa8.21□□□□□ -1.1
CCDC40-205ENST00000571028 PSORS1C2Q9UIG4 136 aa8.21□□□□□ -1.1
CCDC40-205ENST00000571028 JOSD1Q15040 202 aaPredicted RBP8.2□□□□□ -1.1
CCDC40-205ENST00000571028 C1orf137Q5JT78 98 aa8.2□□□□□ -1.1
CCDC40-205ENST00000571028 IGKV2-28A0A075B6P5 120 aa8.19□□□□□ -1.1
CCDC40-205ENST00000571028 IGKV2D-28P01615 120 aa8.19□□□□□ -1.1
CCDC40-205ENST00000571028 KRTAP9-2Q9BYQ4 174 aa8.19□□□□□ -1.1
CCDC40-205ENST00000571028 PAM16Q9Y3D7 125 aa8.19□□□□□ -1.1
CCDC40-205ENST00000571028 IGLV5-37A0A075B6J1 123 aa8.18□□□□□ -1.1
CCDC40-205ENST00000571028 REG3GQ6UW15 175 aa8.18□□□□□ -1.1
CCDC40-205ENST00000571028 LITAFQ99732 161 aa8.18□□□□□ -1.1
CCDC40-205ENST00000571028 TP73-AS1Q9UF72 201 aa8.18□□□□□ -1.1
CCDC40-205ENST00000571028 EIF4EBP3O60516 100 aaPredicted RBP8.17□□□□□ -1.1
CCDC40-205ENST00000571028 TIMM17BO60830 172 aa8.17□□□□□ -1.1
CCDC40-205ENST00000571028 SPATA45Q537H7 98 aa8.17□□□□□ -1.1
CCDC40-205ENST00000571028 SOSTDC1Q6X4U4 206 aa8.17□□□□□ -1.1
CCDC40-205ENST00000571028 VAMP8Q9BV40 100 aa8.17□□□□□ -1.1
CCDC40-205ENST00000571028 TMEM238C9JI98 176 aa8.16□□□□□ -1.1
CCDC40-205ENST00000571028 PYY3Q5JQD4 70 aa8.16□□□□□ -1.1
CCDC40-205ENST00000571028 LINC00308Q8TCZ7 52 aa8.16□□□□□ -1.1
CCDC40-205ENST00000571028 M0R378 163 aa8.15□□□□□ -1.1
CCDC40-205ENST00000571028 C14orf144Q96I85 54 aa8.15□□□□□ -1.1
CCDC40-205ENST00000571028 A0A0U1RQV1 116 aa8.13□□□□□ -1.11
CCDC40-205ENST00000571028 IGLV1-50A0A075B6I6 118 aa8.12□□□□□ -1.11
CCDC40-205ENST00000571028 LOC107984156A0A0G2JMH3 177 aa8.12□□□□□ -1.11
CCDC40-205ENST00000571028 IGLV7-43P04211 117 aa8.12□□□□□ -1.11
CCDC40-205ENST00000571028 COX8AP10176 69 aa8.12□□□□□ -1.11
CCDC40-205ENST00000571028 SRSF9Q13242 221 aaKnown RBP eCLIP8.12□□□□□ -1.11
CCDC40-205ENST00000571028 ARL17AQ8IVW1 177 aa8.12□□□□□ -1.11
CCDC40-205ENST00000571028 SPANXDQ9BXN6 97 aa8.12□□□□□ -1.11
CCDC40-205ENST00000571028 SPANXCQ9NY87 97 aa8.12□□□□□ -1.11
CCDC40-205ENST00000571028 KRTAP10-8P60410 259 aa8.11□□□□□ -1.11
CCDC40-205ENST00000571028 S100A7L2Q5SY68 101 aa8.11□□□□□ -1.11
CCDC40-205ENST00000571028 SPINK6Q6UWN8 80 aa8.11□□□□□ -1.11
CCDC40-205ENST00000571028 MUSTN1Q8IVN3 82 aa8.11□□□□□ -1.11
CCDC40-205ENST00000571028 SPANXB1Q9NS25 103 aaPredicted RBP8.11□□□□□ -1.11
CCDC40-205ENST00000571028 TRBV10-3A0A0K0K1G6 114 aa8.1□□□□□ -1.11
CCDC40-205ENST00000571028 OR13C6PQ8NH95 151 aa8.1□□□□□ -1.11
CCDC40-205ENST00000571028 BCE1O60756 84 aa8.09□□□□□ -1.11
CCDC40-205ENST00000571028 NDUFC2O95298 119 aa8.09□□□□□ -1.11
CCDC40-205ENST00000571028 DDTP30046 118 aa8.09□□□□□ -1.11
CCDC40-205ENST00000571028 UBE2AP49459 152 aa8.09□□□□□ -1.11
CCDC40-205ENST00000571028 FAM19A1Q7Z5A9 133 aa8.09□□□□□ -1.11
CCDC40-205ENST00000571028 KRTAP9-6A0A140TA67 174 aa8.08□□□□□ -1.12
CCDC40-205ENST00000571028 IFITM1P13164 125 aa8.08□□□□□ -1.12
CCDC40-205ENST00000571028 SLC25A34Q6PIV7 304 aa8.08□□□□□ -1.12
CCDC40-205ENST00000571028 COPS9Q8WXC6 57 aa8.08□□□□□ -1.12
CCDC40-205ENST00000571028 TMEM126AQ9H061 195 aa8.08□□□□□ -1.12
CCDC40-205ENST00000571028 TRBV10-2A0A0K0K1G8 114 aa8.07□□□□□ -1.12
CCDC40-205ENST00000571028 Q6ZVH6 145 aa8.07□□□□□ -1.12
CCDC40-205ENST00000571028 HIST1H4GQ99525 98 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms