RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 NDUFA5Q16718 116 aa12.08□□□□□ -0.48
LITAF-205ENST00000570904 FAM229BQ4G0N7 80 aa12.08□□□□□ -0.48
LITAF-205ENST00000570904 SFTA2Q6UW10 78 aa12.08□□□□□ -0.48
LITAF-205ENST00000570904 A0A0U1RRA0 63 aa12.06□□□□□ -0.48
LITAF-205ENST00000570904 LINC00158P58513 81 aa12.06□□□□□ -0.48
LITAF-205ENST00000570904 TMEM223A0PJW6 202 aa12.05□□□□□ -0.48
LITAF-205ENST00000570904 YPEL4Q96NS1 127 aa12.05□□□□□ -0.48
LITAF-205ENST00000570904 LINC00304Q8N9R0 145 aa12.04□□□□□ -0.48
LITAF-205ENST00000570904 IFI27L1Q96BM0 104 aa12.04□□□□□ -0.48
LITAF-205ENST00000570904 CHCHD1Q96BP2 118 aaKnown RBP12.04□□□□□ -0.48
LITAF-205ENST00000570904 IGKV2D-26A0A0A0MRZ7 120 aa12.03□□□□□ -0.48
LITAF-205ENST00000570904 TRAV12-1A0A0B4J245 112 aa12.03□□□□□ -0.48
LITAF-205ENST00000570904 RETNLBQ9BQ08 111 aa12.02□□□□□ -0.49
LITAF-205ENST00000570904 CBLN2Q8IUK8 224 aa12.01□□□□□ -0.49
LITAF-205ENST00000570904 PLEKHB2Q96CS7 222 aa12.01□□□□□ -0.49
LITAF-205ENST00000570904 SMIM13P0DJ93 91 aa12□□□□□ -0.49
LITAF-205ENST00000570904 HIGD2AQ9BW72 106 aa12□□□□□ -0.49
LITAF-205ENST00000570904 FAM19A2Q8N3H0 131 aa11.98□□□□□ -0.49
LITAF-205ENST00000570904 C3orf22Q8N5N4 141 aa11.98□□□□□ -0.49
LITAF-205ENST00000570904 MEIG1Q5JSS6 88 aa11.97□□□□□ -0.49
LITAF-205ENST00000570904 ATP6V1G1O75348 118 aa11.96□□□□□ -0.49
LITAF-205ENST00000570904 HSBP1O75506 76 aa11.96□□□□□ -0.49
LITAF-205ENST00000570904 BOD1L2Q8IYS8 172 aa11.96□□□□□ -0.49
LITAF-205ENST00000570904 H0Y8G0 127 aa11.95□□□□□ -0.5
LITAF-205ENST00000570904 NCR3O14931 201 aa11.95□□□□□ -0.5
LITAF-205ENST00000570904 MIR7-3HGQ8N6C7 128 aa11.95□□□□□ -0.5
LITAF-205ENST00000570904 MUC17Q685J3 4493 aa11.95□□□□□ -0.5
LITAF-205ENST00000570904 SPRR4Q96PI1 79 aa11.93□□□□□ -0.5
LITAF-205ENST00000570904 NDUFA12Q9UI09 145 aa11.93□□□□□ -0.5
LITAF-205ENST00000570904 PRYO14603 147 aa11.92□□□□□ -0.5
LITAF-205ENST00000570904 HERV-K104P63124 156 aa11.92□□□□□ -0.5
LITAF-205ENST00000570904 TSPEAR-AS2P59090 65 aa11.9□□□□□ -0.5
LITAF-205ENST00000570904 MYMXA0A1B0GTQ4 84 aa11.89□□□□□ -0.51
LITAF-205ENST00000570904 TRGC2P03986 189 aa11.89□□□□□ -0.51
LITAF-205ENST00000570904 LINC00310P59036 64 aa11.89□□□□□ -0.51
LITAF-205ENST00000570904 KCNQ1DNQ9H478 68 aa11.88□□□□□ -0.51
LITAF-205ENST00000570904 IGLV7-46A0A075B6I9 117 aa11.87□□□□□ -0.51
LITAF-205ENST00000570904 TRBV10-3A0A0K0K1G6 114 aa11.87□□□□□ -0.51
LITAF-205ENST00000570904 LINC00587B1AMM8 73 aa11.87□□□□□ -0.51
LITAF-205ENST00000570904 SERF1AO75920 110 aa11.87□□□□□ -0.51
LITAF-205ENST00000570904 LEPROTL1O95214 131 aa11.87□□□□□ -0.51
LITAF-205ENST00000570904 SPRR1AP35321 89 aa11.87□□□□□ -0.51
LITAF-205ENST00000570904 LINC00337Q8N6G1 96 aa11.87□□□□□ -0.51
LITAF-205ENST00000570904 ZNF706Q9Y5V0 76 aaPredicted RBP11.87□□□□□ -0.51
LITAF-205ENST00000570904 FAT4Q6V0I7 4981 aa11.87□□□□□ -0.51
LITAF-205ENST00000570904 ETDCA0A1B0GVM5 59 aa11.86□□□□□ -0.51
LITAF-205ENST00000570904 CTAG1AP78358 180 aa11.86□□□□□ -0.51
LITAF-205ENST00000570904 DAND5Q8N907 189 aa11.86□□□□□ -0.51
LITAF-205ENST00000570904 MAP1LC3CQ9BXW4 147 aa11.86□□□□□ -0.51
LITAF-205ENST00000570904 KRTAP4-16G5E9R7 235 aaPredicted RBP11.85□□□□□ -0.51
LITAF-205ENST00000570904 TPRXLQ17RH7 258 aa11.85□□□□□ -0.51
LITAF-205ENST00000570904 SMCR5Q8TEV8 140 aa11.85□□□□□ -0.51
LITAF-205ENST00000570904 PPDPFQ9H3Y8 114 aa11.85□□□□□ -0.51
LITAF-205ENST00000570904 A0A0U1RQV1 116 aa11.84□□□□□ -0.51
LITAF-205ENST00000570904 LEPROTO15243 131 aa11.84□□□□□ -0.51
LITAF-205ENST00000570904 CDIP1Q9H305 208 aa11.84□□□□□ -0.51
LITAF-205ENST00000570904 PLNP26678 52 aa11.82□□□□□ -0.52
LITAF-205ENST00000570904 SPAG11AQ6PDA7 123 aa11.82□□□□□ -0.52
LITAF-205ENST00000570904 PMCHL2Q9BQD1 86 aa11.82□□□□□ -0.52
LITAF-205ENST00000570904 J3QQQ9 107 aa11.81□□□□□ -0.52
LITAF-205ENST00000570904 FABP4P15090 132 aa11.81□□□□□ -0.52
LITAF-205ENST00000570904 Q8NBF4 154 aa11.81□□□□□ -0.52
LITAF-205ENST00000570904 HSPB8Q9UJY1 196 aa11.8□□□□□ -0.52
LITAF-205ENST00000570904 DPM2O94777 84 aa11.79□□□□□ -0.52
LITAF-205ENST00000570904 C4orf48Q5BLP8 95 aa11.79□□□□□ -0.52
LITAF-205ENST00000570904 LOC107984156A0A0G2JMH3 177 aa11.78□□□□□ -0.52
LITAF-205ENST00000570904 B5MCH6 92 aa11.78□□□□□ -0.52
LITAF-205ENST00000570904 DDTP30046 118 aa11.78□□□□□ -0.52
LITAF-205ENST00000570904 HERVK_113P61574 105 aa11.78□□□□□ -0.52
LITAF-205ENST00000570904 S100A12P80511 92 aa11.78□□□□□ -0.52
LITAF-205ENST00000570904 ARL17AQ8IVW1 177 aa11.78□□□□□ -0.52
LITAF-205ENST00000570904 TRBV10-2A0A0K0K1G8 114 aa11.76□□□□□ -0.53
LITAF-205ENST00000570904 ERC2-IT1O76042 136 aa11.76□□□□□ -0.53
LITAF-205ENST00000570904 IGKCP01834 107 aa11.76□□□□□ -0.53
LITAF-205ENST00000570904 LGALS3P17931 250 aaKnown RBP11.76□□□□□ -0.53
LITAF-205ENST00000570904 LINC00483Q53H64 154 aa11.76□□□□□ -0.53
LITAF-205ENST00000570904 GAGE2AQ6NT46 116 aa11.76□□□□□ -0.53
LITAF-205ENST00000570904 NMUP48645 174 aa11.75□□□□□ -0.53
LITAF-205ENST00000570904 MIEN1Q9BRT3 115 aa11.75□□□□□ -0.53
LITAF-205ENST00000570904 SPANXB1Q9NS25 103 aaPredicted RBP11.75□□□□□ -0.53
LITAF-205ENST00000570904 FP248Q71RG6 208 aaPredicted RBP11.73□□□□□ -0.53
LITAF-205ENST00000570904 SLC7A5P1Q8MH63 180 aa11.73□□□□□ -0.53
LITAF-205ENST00000570904 Q9BRP9 147 aa11.73□□□□□ -0.53
LITAF-205ENST00000570904 COLCA2A8K830 154 aa11.72□□□□□ -0.53
LITAF-205ENST00000570904 IGLV9-49A0A0B4J1Y8 123 aa11.71□□□□□ -0.53
LITAF-205ENST00000570904 NPC2P61916 151 aa11.71□□□□□ -0.53
LITAF-205ENST00000570904 MOBPQ13875 183 aa11.71□□□□□ -0.53
LITAF-205ENST00000570904 S100A7L2Q5SY68 101 aa11.71□□□□□ -0.53
LITAF-205ENST00000570904 Q6ZRX8 168 aa11.71□□□□□ -0.53
LITAF-205ENST00000570904 EIF4EBP3O60516 100 aaPredicted RBP11.7□□□□□ -0.54
LITAF-205ENST00000570904 SOSTDC1Q6X4U4 206 aa11.7□□□□□ -0.54
LITAF-205ENST00000570904 NDUFC2O95298 119 aa11.69□□□□□ -0.54
LITAF-205ENST00000570904 SPINK1P00995 79 aa11.69□□□□□ -0.54
LITAF-205ENST00000570904 IGLV6-57P01721 117 aa11.69□□□□□ -0.54
LITAF-205ENST00000570904 A0A0J9YXY3 114 aa11.68□□□□□ -0.54
LITAF-205ENST00000570904 ADAMTSL4-AS1Q5T5F5 129 aa11.68□□□□□ -0.54
LITAF-205ENST00000570904 TRAV23DV6A0A075B6W5 121 aa11.67□□□□□ -0.54
LITAF-205ENST00000570904 LCE2AQ5TA79 106 aaPredicted RBP11.67□□□□□ -0.54
LITAF-205ENST00000570904 E9PLD3 99 aa11.66□□□□□ -0.54
LITAF-205ENST00000570904 KRTAP13-3Q3SY46 172 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms