RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 TPRXLQ17RH7 258 aa4.94□□□□□ -1.62
CTDNEP1-203ENST00000570385 URB1-AS1Q96HZ7 61 aa4.94□□□□□ -1.62
CTDNEP1-203ENST00000570385 PPDPFQ9H3Y8 114 aa4.94□□□□□ -1.62
CTDNEP1-203ENST00000570385 C11orf86A6NJI1 115 aa4.93□□□□□ -1.62
CTDNEP1-203ENST00000570385 LINC00158P58513 81 aa4.93□□□□□ -1.62
CTDNEP1-203ENST00000570385 TMEM170BQ5T4T1 132 aa4.93□□□□□ -1.62
CTDNEP1-203ENST00000570385 BAGE3Q86Y29 109 aa4.93□□□□□ -1.62
CTDNEP1-203ENST00000570385 HBDP02042 147 aa4.92□□□□□ -1.62
CTDNEP1-203ENST00000570385 COX17Q14061 63 aa4.92□□□□□ -1.62
CTDNEP1-203ENST00000570385 LCE2CQ5TA81 110 aa4.92□□□□□ -1.62
CTDNEP1-203ENST00000570385 UQCC3Q6UW78 93 aa4.92□□□□□ -1.62
CTDNEP1-203ENST00000570385 DAND5Q8N907 189 aa4.92□□□□□ -1.62
CTDNEP1-203ENST00000570385 SEC11CQ9BY50 192 aa4.92□□□□□ -1.62
CTDNEP1-203ENST00000570385 RPS10P5Q9NQ39 176 aa4.92□□□□□ -1.62
CTDNEP1-203ENST00000570385 LINC00614P0C842 121 aa4.91□□□□□ -1.62
CTDNEP1-203ENST00000570385 COX19Q49B96 90 aa4.91□□□□□ -1.62
CTDNEP1-203ENST00000570385 C18orf32Q8TCD1 76 aa4.91□□□□□ -1.62
CTDNEP1-203ENST00000570385 SPRR4Q96PI1 79 aa4.91□□□□□ -1.62
CTDNEP1-203ENST00000570385 TRAPPC1Q9Y5R8 145 aa4.91□□□□□ -1.62
CTDNEP1-203ENST00000570385 IFITM2Q01629 132 aa4.9□□□□□ -1.63
CTDNEP1-203ENST00000570385 C4orf48Q5BLP8 95 aa4.9□□□□□ -1.63
CTDNEP1-203ENST00000570385 COMMD7Q86VX2 200 aa4.9□□□□□ -1.63
CTDNEP1-203ENST00000570385 NCR3O14931 201 aa4.89□□□□□ -1.63
CTDNEP1-203ENST00000570385 SMIM13P0DJ93 91 aa4.89□□□□□ -1.63
CTDNEP1-203ENST00000570385 SMCPP49901 116 aaPredicted RBP4.89□□□□□ -1.63
CTDNEP1-203ENST00000570385 BOD1L2Q8IYS8 172 aa4.89□□□□□ -1.63
CTDNEP1-203ENST00000570385 Q8NBF4 154 aa4.89□□□□□ -1.63
CTDNEP1-203ENST00000570385 SMCR5Q8TEV8 140 aa4.89□□□□□ -1.63
CTDNEP1-203ENST00000570385 CHTOPQ9Y3Y2 248 aaKnown RBP4.89□□□□□ -1.63
CTDNEP1-203ENST00000570385 KRTAP9-6A0A140TA67 174 aa4.88□□□□□ -1.63
CTDNEP1-203ENST00000570385 ATP6V1G1O75348 118 aa4.88□□□□□ -1.63
CTDNEP1-203ENST00000570385 SPAG11AQ6PDA7 123 aa4.88□□□□□ -1.63
CTDNEP1-203ENST00000570385 LINC00337Q8N6G1 96 aa4.88□□□□□ -1.63
CTDNEP1-203ENST00000570385 TMEM223A0PJW6 202 aa4.87□□□□□ -1.63
CTDNEP1-203ENST00000570385 RHEBQ15382 184 aa4.87□□□□□ -1.63
CTDNEP1-203ENST00000570385 MEIG1Q5JSS6 88 aa4.87□□□□□ -1.63
CTDNEP1-203ENST00000570385 SFTA2Q6UW10 78 aa4.87□□□□□ -1.63
CTDNEP1-203ENST00000570385 MIR7-3HGQ8N6C7 128 aa4.87□□□□□ -1.63
CTDNEP1-203ENST00000570385 ZNF706Q9Y5V0 76 aaPredicted RBP4.87□□□□□ -1.63
CTDNEP1-203ENST00000570385 TRBV10-3A0A0K0K1G6 114 aa4.86□□□□□ -1.63
CTDNEP1-203ENST00000570385 ETDCA0A1B0GVM5 59 aa4.86□□□□□ -1.63
CTDNEP1-203ENST00000570385 PRYO14603 147 aa4.86□□□□□ -1.63
CTDNEP1-203ENST00000570385 CTAG1AP78358 180 aa4.86□□□□□ -1.63
CTDNEP1-203ENST00000570385 KRTAP13-3Q3SY46 172 aa4.86□□□□□ -1.63
CTDNEP1-203ENST00000570385 C10orf91Q5T1B1 145 aa4.86□□□□□ -1.63
CTDNEP1-203ENST00000570385 GAGE2AQ6NT46 116 aa4.86□□□□□ -1.63
CTDNEP1-203ENST00000570385 FP248Q71RG6 208 aaPredicted RBP4.85□□□□□ -1.63
CTDNEP1-203ENST00000570385 IFI27L1Q96BM0 104 aa4.85□□□□□ -1.63
CTDNEP1-203ENST00000570385 KRTAP4-1Q9BYQ7 146 aa4.85□□□□□ -1.63
CTDNEP1-203ENST00000570385 IGLV9-49A0A0B4J1Y8 123 aa4.84□□□□□ -1.63
CTDNEP1-203ENST00000570385 KRTAP4-16G5E9R7 235 aaPredicted RBP4.84□□□□□ -1.63
CTDNEP1-203ENST00000570385 H0Y8G0 127 aa4.84□□□□□ -1.63
CTDNEP1-203ENST00000570385 ERC2-IT1O76042 136 aa4.84□□□□□ -1.63
CTDNEP1-203ENST00000570385 SPRR1AP35321 89 aa4.84□□□□□ -1.63
CTDNEP1-203ENST00000570385 MOBPQ13875 183 aa4.84□□□□□ -1.63
CTDNEP1-203ENST00000570385 KCNQ1DNQ9H478 68 aa4.84□□□□□ -1.63
CTDNEP1-203ENST00000570385 NDUFA12Q9UI09 145 aa4.84□□□□□ -1.63
CTDNEP1-203ENST00000570385 TRAV12-1A0A0B4J245 112 aa4.83□□□□□ -1.64
CTDNEP1-203ENST00000570385 SPINK1P00995 79 aa4.83□□□□□ -1.64
CTDNEP1-203ENST00000570385 APOC3P02656 99 aa4.83□□□□□ -1.64
CTDNEP1-203ENST00000570385 ASB16-AS1Q495Z4 193 aa4.83□□□□□ -1.64
CTDNEP1-203ENST00000570385 FAM19A2Q8N3H0 131 aa4.83□□□□□ -1.64
CTDNEP1-203ENST00000570385 B5MCH6 92 aa4.82□□□□□ -1.64
CTDNEP1-203ENST00000570385 LINC01547P58512 204 aaPredicted RBP4.82□□□□□ -1.64
CTDNEP1-203ENST00000570385 HERV-K104P63124 156 aa4.82□□□□□ -1.64
CTDNEP1-203ENST00000570385 LINC00483Q53H64 154 aa4.82□□□□□ -1.64
CTDNEP1-203ENST00000570385 TSPEAR-AS2P59090 65 aa4.81□□□□□ -1.64
CTDNEP1-203ENST00000570385 CHCHD1Q96BP2 118 aaKnown RBP4.81□□□□□ -1.64
CTDNEP1-203ENST00000570385 MYMXA0A1B0GTQ4 84 aa4.8□□□□□ -1.64
CTDNEP1-203ENST00000570385 DDTP30046 118 aa4.8□□□□□ -1.64
CTDNEP1-203ENST00000570385 SEC61BP60468 96 aaKnown RBP4.8□□□□□ -1.64
CTDNEP1-203ENST00000570385 S100A12P80511 92 aa4.8□□□□□ -1.64
CTDNEP1-203ENST00000570385 Q8N377 158 aa4.8□□□□□ -1.64
CTDNEP1-203ENST00000570385 Q9BRP9 147 aa4.8□□□□□ -1.64
CTDNEP1-203ENST00000570385 MAP1LC3CQ9BXW4 147 aa4.8□□□□□ -1.64
CTDNEP1-203ENST00000570385 TMA7Q9Y2S6 64 aaKnown RBP4.8□□□□□ -1.64
CTDNEP1-203ENST00000570385 LINC00587B1AMM8 73 aa4.79□□□□□ -1.64
CTDNEP1-203ENST00000570385 HSBP1O75506 76 aa4.79□□□□□ -1.64
CTDNEP1-203ENST00000570385 PMCHL2Q9BQD1 86 aa4.79□□□□□ -1.64
CTDNEP1-203ENST00000570385 SNAPINO95295 136 aa4.78□□□□□ -1.64
CTDNEP1-203ENST00000570385 NPC2P61916 151 aa4.78□□□□□ -1.64
CTDNEP1-203ENST00000570385 C9orf153Q5TBE3 101 aa4.78□□□□□ -1.64
CTDNEP1-203ENST00000570385 Q6ZRX8 168 aa4.78□□□□□ -1.64
CTDNEP1-203ENST00000570385 SSBP3-AS1Q7Z2R9 100 aa4.78□□□□□ -1.64
CTDNEP1-203ENST00000570385 ST20-AS1Q8NBB2 130 aa4.78□□□□□ -1.64
CTDNEP1-203ENST00000570385 LEPROTO15243 131 aa4.77□□□□□ -1.65
CTDNEP1-203ENST00000570385 SLC25A20O43772 301 aa4.77□□□□□ -1.65
CTDNEP1-203ENST00000570385 NDUFA5Q16718 116 aa4.77□□□□□ -1.65
CTDNEP1-203ENST00000570385 S100A7L2Q5SY68 101 aa4.77□□□□□ -1.65
CTDNEP1-203ENST00000570385 SVBPQ8N300 66 aa4.77□□□□□ -1.65
CTDNEP1-203ENST00000570385 YPEL4Q96NS1 127 aa4.77□□□□□ -1.65
CTDNEP1-203ENST00000570385 MIEN1Q9BRT3 115 aa4.77□□□□□ -1.65
CTDNEP1-203ENST00000570385 TRBV10-2A0A0K0K1G8 114 aa4.76□□□□□ -1.65
CTDNEP1-203ENST00000570385 J3QQQ9 107 aa4.76□□□□□ -1.65
CTDNEP1-203ENST00000570385 EIF4EBP3O60516 100 aaPredicted RBP4.76□□□□□ -1.65
CTDNEP1-203ENST00000570385 FABP4P15090 132 aa4.76□□□□□ -1.65
CTDNEP1-203ENST00000570385 XP32Q5T750 250 aa4.76□□□□□ -1.65
CTDNEP1-203ENST00000570385 SPANXB1Q9NS25 103 aaPredicted RBP4.76□□□□□ -1.65
CTDNEP1-203ENST00000570385 TRAV23DV6A0A075B6W5 121 aa4.75□□□□□ -1.65
CTDNEP1-203ENST00000570385 LOC107984156A0A0G2JMH3 177 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms