RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 SND1-IT1Q9HBX3 110 aa7.23□□□□□ -1.25
SCAMP2-212ENST00000569904 PFN2P35080 140 aa7.22□□□□□ -1.25
SCAMP2-212ENST00000569904 AKR1D1P51857 326 aa7.22□□□□□ -1.25
SCAMP2-212ENST00000569904 TMEM126AQ9H061 195 aa7.22□□□□□ -1.25
SCAMP2-212ENST00000569904 RPS10P5Q9NQ39 176 aa7.22□□□□□ -1.25
SCAMP2-212ENST00000569904 ANAPC11Q9NYG5 84 aa7.22□□□□□ -1.25
SCAMP2-212ENST00000569904 RPL24P83731 157 aaKnown RBP7.21□□□□□ -1.26
SCAMP2-212ENST00000569904 Q8NDZ9 215 aa7.21□□□□□ -1.26
SCAMP2-212ENST00000569904 ZNF625Q96I27 306 aaPredicted RBP7.21□□□□□ -1.26
SCAMP2-212ENST00000569904 TRAPPC1Q9Y5R8 145 aa7.21□□□□□ -1.26
SCAMP2-212ENST00000569904 C11orf86A6NJI1 115 aa7.2□□□□□ -1.26
SCAMP2-212ENST00000569904 M0R378 163 aa7.2□□□□□ -1.26
SCAMP2-212ENST00000569904 SNRPEP62304 92 aaKnown RBP7.2□□□□□ -1.26
SCAMP2-212ENST00000569904 PCP4L1A6NKN8 68 aa7.19□□□□□ -1.26
SCAMP2-212ENST00000569904 NDUFA6P56556 154 aa7.19□□□□□ -1.26
SCAMP2-212ENST00000569904 TMEM238C9JI98 176 aa7.18□□□□□ -1.26
SCAMP2-212ENST00000569904 PRLHP81277 87 aa7.18□□□□□ -1.26
SCAMP2-212ENST00000569904 PMCHL1Q16048 86 aa7.18□□□□□ -1.26
SCAMP2-212ENST00000569904 FAM19A1Q7Z5A9 133 aa7.18□□□□□ -1.26
SCAMP2-212ENST00000569904 BAGE3Q86Y29 109 aa7.18□□□□□ -1.26
SCAMP2-212ENST00000569904 LINC00304Q8N9R0 145 aa7.18□□□□□ -1.26
SCAMP2-212ENST00000569904 PLEKHB2Q96CS7 222 aa7.18□□□□□ -1.26
SCAMP2-212ENST00000569904 LINC00587B1AMM8 73 aa7.17□□□□□ -1.26
SCAMP2-212ENST00000569904 TMEM170BQ5T4T1 132 aa7.17□□□□□ -1.26
SCAMP2-212ENST00000569904 FAT4Q6V0I7 4981 aa7.16□□□□□ -1.26
SCAMP2-212ENST00000569904 IGKV2D-26A0A0A0MRZ7 120 aa7.16□□□□□ -1.26
SCAMP2-212ENST00000569904 TRAV12-1A0A0B4J245 112 aa7.16□□□□□ -1.26
SCAMP2-212ENST00000569904 A0A0U1RQV1 116 aa7.16□□□□□ -1.26
SCAMP2-212ENST00000569904 TMEM223A0PJW6 202 aa7.16□□□□□ -1.26
SCAMP2-212ENST00000569904 S100A6P06703 90 aa7.16□□□□□ -1.26
SCAMP2-212ENST00000569904 TPRXLQ17RH7 258 aa7.16□□□□□ -1.26
SCAMP2-212ENST00000569904 CHTOPQ9Y3Y2 248 aaKnown RBP7.15□□□□□ -1.26
SCAMP2-212ENST00000569904 CHCHD1Q96BP2 118 aaKnown RBP7.14□□□□□ -1.27
SCAMP2-212ENST00000569904 SPRR1AP35321 89 aa7.13□□□□□ -1.27
SCAMP2-212ENST00000569904 LINC00158P58513 81 aa7.12□□□□□ -1.27
SCAMP2-212ENST00000569904 IFI27L1Q96BM0 104 aa7.12□□□□□ -1.27
SCAMP2-212ENST00000569904 SPRR4Q96PI1 79 aa7.12□□□□□ -1.27
SCAMP2-212ENST00000569904 RETNLBQ9BQ08 111 aa7.12□□□□□ -1.27
SCAMP2-212ENST00000569904 KRTAP4-16G5E9R7 235 aaPredicted RBP7.11□□□□□ -1.27
SCAMP2-212ENST00000569904 LCE2AQ5TA79 106 aaPredicted RBP7.11□□□□□ -1.27
SCAMP2-212ENST00000569904 SPAG11AQ6PDA7 123 aa7.11□□□□□ -1.27
SCAMP2-212ENST00000569904 C3orf22Q8N5N4 141 aa7.11□□□□□ -1.27
SCAMP2-212ENST00000569904 LINC00337Q8N6G1 96 aa7.11□□□□□ -1.27
SCAMP2-212ENST00000569904 PRYO14603 147 aa7.1□□□□□ -1.27
SCAMP2-212ENST00000569904 HIST1H2BKO60814 126 aa7.1□□□□□ -1.27
SCAMP2-212ENST00000569904 HIST1H2BJP06899 126 aa7.1□□□□□ -1.27
SCAMP2-212ENST00000569904 HIST1H2BOP23527 126 aa7.1□□□□□ -1.27
SCAMP2-212ENST00000569904 HIST1H2BBP33778 126 aa7.1□□□□□ -1.27
SCAMP2-212ENST00000569904 HIST1H2BDP58876 126 aa7.1□□□□□ -1.27
SCAMP2-212ENST00000569904 HIST1H2BCP62807 126 aa7.1□□□□□ -1.27
SCAMP2-212ENST00000569904 HERV-K104P63124 156 aa7.1□□□□□ -1.27
SCAMP2-212ENST00000569904 HIST2H2BEQ16778 126 aa7.1□□□□□ -1.27
SCAMP2-212ENST00000569904 COA6Q5JTJ3 125 aaKnown RBP7.1□□□□□ -1.27
SCAMP2-212ENST00000569904 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.1□□□□□ -1.27
SCAMP2-212ENST00000569904 HIST3H2BBQ8N257 126 aa7.1□□□□□ -1.27
SCAMP2-212ENST00000569904 HIST1H2BHQ93079 126 aa7.1□□□□□ -1.27
SCAMP2-212ENST00000569904 HIST1H2BNQ99877 126 aa7.1□□□□□ -1.27
SCAMP2-212ENST00000569904 HIST1H2BMQ99879 126 aa7.1□□□□□ -1.27
SCAMP2-212ENST00000569904 HIGD2AQ9BW72 106 aa7.1□□□□□ -1.27
SCAMP2-212ENST00000569904 KCNQ1DNQ9H478 68 aa7.1□□□□□ -1.27
SCAMP2-212ENST00000569904 SMIM13P0DJ93 91 aa7.09□□□□□ -1.27
SCAMP2-212ENST00000569904 PYY3Q5JQD4 70 aa7.09□□□□□ -1.27
SCAMP2-212ENST00000569904 ZNF706Q9Y5V0 76 aaPredicted RBP7.09□□□□□ -1.27
SCAMP2-212ENST00000569904 IGLV7-46A0A075B6I9 117 aa7.08□□□□□ -1.28
SCAMP2-212ENST00000569904 LOC107984156A0A0G2JMH3 177 aa7.08□□□□□ -1.28
SCAMP2-212ENST00000569904 ARL17AQ8IVW1 177 aa7.08□□□□□ -1.28
SCAMP2-212ENST00000569904 A0A0U1RRA0 63 aa7.07□□□□□ -1.28
SCAMP2-212ENST00000569904 S100A2P29034 98 aa7.07□□□□□ -1.28
SCAMP2-212ENST00000569904 FP248Q71RG6 208 aaPredicted RBP7.07□□□□□ -1.28
SCAMP2-212ENST00000569904 BOD1L2Q8IYS8 172 aa7.07□□□□□ -1.28
SCAMP2-212ENST00000569904 MIR7-3HGQ8N6C7 128 aa7.07□□□□□ -1.28
SCAMP2-212ENST00000569904 CDIP1Q9H305 208 aa7.07□□□□□ -1.28
SCAMP2-212ENST00000569904 LINC00483Q53H64 154 aa7.06□□□□□ -1.28
SCAMP2-212ENST00000569904 TRGC2P03986 189 aa7.05□□□□□ -1.28
SCAMP2-212ENST00000569904 MEIG1Q5JSS6 88 aa7.05□□□□□ -1.28
SCAMP2-212ENST00000569904 SMCR5Q8TEV8 140 aa7.05□□□□□ -1.28
SCAMP2-212ENST00000569904 PPDPFQ9H3Y8 114 aa7.05□□□□□ -1.28
SCAMP2-212ENST00000569904 NDUFA12Q9UI09 145 aa7.05□□□□□ -1.28
SCAMP2-212ENST00000569904 MYMXA0A1B0GTQ4 84 aa7.04□□□□□ -1.28
SCAMP2-212ENST00000569904 NCR3O14931 201 aa7.04□□□□□ -1.28
SCAMP2-212ENST00000569904 HSBP1O75506 76 aa7.04□□□□□ -1.28
SCAMP2-212ENST00000569904 MAP1LC3CQ9BXW4 147 aa7.04□□□□□ -1.28
SCAMP2-212ENST00000569904 TRBV10-3A0A0K0K1G6 114 aa7.03□□□□□ -1.28
SCAMP2-212ENST00000569904 TRBV10-2A0A0K0K1G8 114 aa7.03□□□□□ -1.28
SCAMP2-212ENST00000569904 TSPEAR-AS2P59090 65 aa7.03□□□□□ -1.28
SCAMP2-212ENST00000569904 FAM19A2Q8N3H0 131 aa7.03□□□□□ -1.28
SCAMP2-212ENST00000569904 HIST1H2BLQ99880 126 aa7.03□□□□□ -1.28
SCAMP2-212ENST00000569904 ETDCA0A1B0GVM5 59 aa7.02□□□□□ -1.29
SCAMP2-212ENST00000569904 SPINK1P00995 79 aa7.02□□□□□ -1.29
SCAMP2-212ENST00000569904 LINC00310P59036 64 aa7.02□□□□□ -1.29
SCAMP2-212ENST00000569904 JOSD1Q15040 202 aaPredicted RBP7.02□□□□□ -1.29
SCAMP2-212ENST00000569904 Q8NBF4 154 aa7.02□□□□□ -1.29
SCAMP2-212ENST00000569904 B5MCH6 92 aa7.01□□□□□ -1.29
SCAMP2-212ENST00000569904 LEPROTO15243 131 aa7.01□□□□□ -1.29
SCAMP2-212ENST00000569904 LEPROTL1O95214 131 aa7.01□□□□□ -1.29
SCAMP2-212ENST00000569904 PLNP26678 52 aa7.01□□□□□ -1.29
SCAMP2-212ENST00000569904 RPS29P62273 56 aaKnown RBP7.01□□□□□ -1.29
SCAMP2-212ENST00000569904 KRTAP13-3Q3SY46 172 aa7.01□□□□□ -1.29
SCAMP2-212ENST00000569904 C4orf48Q5BLP8 95 aa7.01□□□□□ -1.29
SCAMP2-212ENST00000569904 C14orf144Q96I85 54 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms