RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 TRAV12-1A0A0B4J245 112 aa13.23□□□□□ -0.29
RBFOX1-219ENST00000569895 PRLHP81277 87 aa13.23□□□□□ -0.29
RBFOX1-219ENST00000569895 IFI27L1Q96BM0 104 aa13.23□□□□□ -0.29
RBFOX1-219ENST00000569895 IGKV2D-26A0A0A0MRZ7 120 aa13.22□□□□□ -0.29
RBFOX1-219ENST00000569895 TMEM238C9JI98 176 aa13.22□□□□□ -0.29
RBFOX1-219ENST00000569895 ATP6V1G1O75348 118 aa13.22□□□□□ -0.29
RBFOX1-219ENST00000569895 TMEM223A0PJW6 202 aa13.21□□□□□ -0.29
RBFOX1-219ENST00000569895 M0R378 163 aa13.2□□□□□ -0.3
RBFOX1-219ENST00000569895 KRTAP13-2Q52LG2 175 aa13.2□□□□□ -0.3
RBFOX1-219ENST00000569895 CBLN2Q8IUK8 224 aa13.18□□□□□ -0.3
RBFOX1-219ENST00000569895 LINC00304Q8N9R0 145 aa13.18□□□□□ -0.3
RBFOX1-219ENST00000569895 YPEL4Q96NS1 127 aa13.17□□□□□ -0.3
RBFOX1-219ENST00000569895 A0A0U1RRA0 63 aa13.16□□□□□ -0.3
RBFOX1-219ENST00000569895 LINC00587B1AMM8 73 aa13.16□□□□□ -0.3
RBFOX1-219ENST00000569895 Q8NDZ9 215 aa13.16□□□□□ -0.3
RBFOX1-219ENST00000569895 HSBP1O75506 76 aa13.15□□□□□ -0.3
RBFOX1-219ENST00000569895 HERV-K104P63124 156 aa13.15□□□□□ -0.3
RBFOX1-219ENST00000569895 CTAG1AP78358 180 aa13.15□□□□□ -0.3
RBFOX1-219ENST00000569895 PLEKHB2Q96CS7 222 aa13.15□□□□□ -0.3
RBFOX1-219ENST00000569895 MEIG1Q5JSS6 88 aa13.14□□□□□ -0.31
RBFOX1-219ENST00000569895 SMIM13P0DJ93 91 aa13.13□□□□□ -0.31
RBFOX1-219ENST00000569895 HIGD2AQ9BW72 106 aa13.13□□□□□ -0.31
RBFOX1-219ENST00000569895 BOD1L2Q8IYS8 172 aa13.11□□□□□ -0.31
RBFOX1-219ENST00000569895 FAM19A2Q8N3H0 131 aa13.1□□□□□ -0.31
RBFOX1-219ENST00000569895 MAP1LC3CQ9BXW4 147 aa13.1□□□□□ -0.31
RBFOX1-219ENST00000569895 MYMXA0A1B0GTQ4 84 aa13.09□□□□□ -0.31
RBFOX1-219ENST00000569895 MIR7-3HGQ8N6C7 128 aa13.09□□□□□ -0.31
RBFOX1-219ENST00000569895 NDUFA12Q9UI09 145 aa13.09□□□□□ -0.31
RBFOX1-219ENST00000569895 ZNF706Q9Y5V0 76 aaPredicted RBP13.09□□□□□ -0.31
RBFOX1-219ENST00000569895 PRYO14603 147 aa13.08□□□□□ -0.32
RBFOX1-219ENST00000569895 H0Y8G0 127 aa13.07□□□□□ -0.32
RBFOX1-219ENST00000569895 A0A0U1RQV1 116 aa13.06□□□□□ -0.32
RBFOX1-219ENST00000569895 S100A12P80511 92 aa13.06□□□□□ -0.32
RBFOX1-219ENST00000569895 LEPROTL1O95214 131 aa13.05□□□□□ -0.32
RBFOX1-219ENST00000569895 SPAG11AQ6PDA7 123 aa13.05□□□□□ -0.32
RBFOX1-219ENST00000569895 SPRR4Q96PI1 79 aa13.05□□□□□ -0.32
RBFOX1-219ENST00000569895 RETNLBQ9BQ08 111 aa13.05□□□□□ -0.32
RBFOX1-219ENST00000569895 NCR3O14931 201 aa13.04□□□□□ -0.32
RBFOX1-219ENST00000569895 TRGC2P03986 189 aa13.04□□□□□ -0.32
RBFOX1-219ENST00000569895 LINC00337Q8N6G1 96 aa13.04□□□□□ -0.32
RBFOX1-219ENST00000569895 KCNQ1DNQ9H478 68 aa13.04□□□□□ -0.32
RBFOX1-219ENST00000569895 C3orf22Q8N5N4 141 aa13.03□□□□□ -0.32
RBFOX1-219ENST00000569895 PLNP26678 52 aa13.02□□□□□ -0.33
RBFOX1-219ENST00000569895 HSPB8Q9UJY1 196 aa13.02□□□□□ -0.33
RBFOX1-219ENST00000569895 ETDCA0A1B0GVM5 59 aa13.01□□□□□ -0.33
RBFOX1-219ENST00000569895 LEPROTO15243 131 aa13.01□□□□□ -0.33
RBFOX1-219ENST00000569895 SPRR1AP35321 89 aa13.01□□□□□ -0.33
RBFOX1-219ENST00000569895 C4orf48Q5BLP8 95 aa13.01□□□□□ -0.33
RBFOX1-219ENST00000569895 IGLV7-46A0A075B6I9 117 aa13□□□□□ -0.33
RBFOX1-219ENST00000569895 SERF1AO75920 110 aa12.99□□□□□ -0.33
RBFOX1-219ENST00000569895 HERVK_113P61574 105 aa12.99□□□□□ -0.33
RBFOX1-219ENST00000569895 CDIP1Q9H305 208 aa12.99□□□□□ -0.33
RBFOX1-219ENST00000569895 TRBV10-3A0A0K0K1G6 114 aa12.98□□□□□ -0.33
RBFOX1-219ENST00000569895 TPRXLQ17RH7 258 aa12.98□□□□□ -0.33
RBFOX1-219ENST00000569895 SMCR5Q8TEV8 140 aa12.98□□□□□ -0.33
RBFOX1-219ENST00000569895 LOC107984156A0A0G2JMH3 177 aa12.96□□□□□ -0.33
RBFOX1-219ENST00000569895 J3QQQ9 107 aa12.96□□□□□ -0.33
RBFOX1-219ENST00000569895 DPM2O94777 84 aa12.96□□□□□ -0.33
RBFOX1-219ENST00000569895 NMUP48645 174 aa12.96□□□□□ -0.33
RBFOX1-219ENST00000569895 ARL17AQ8IVW1 177 aa12.96□□□□□ -0.33
RBFOX1-219ENST00000569895 KRTAP4-16G5E9R7 235 aaPredicted RBP12.95□□□□□ -0.34
RBFOX1-219ENST00000569895 MIEN1Q9BRT3 115 aa12.95□□□□□ -0.34
RBFOX1-219ENST00000569895 TRBV10-2A0A0K0K1G8 114 aa12.94□□□□□ -0.34
RBFOX1-219ENST00000569895 FABP4P15090 132 aa12.94□□□□□ -0.34
RBFOX1-219ENST00000569895 LGALS3P17931 250 aaKnown RBP12.94□□□□□ -0.34
RBFOX1-219ENST00000569895 TSPEAR-AS2P59090 65 aa12.94□□□□□ -0.34
RBFOX1-219ENST00000569895 IGKCP01834 107 aa12.93□□□□□ -0.34
RBFOX1-219ENST00000569895 DDTP30046 118 aa12.93□□□□□ -0.34
RBFOX1-219ENST00000569895 LINC00310P59036 64 aa12.93□□□□□ -0.34
RBFOX1-219ENST00000569895 DAND5Q8N907 189 aa12.93□□□□□ -0.34
RBFOX1-219ENST00000569895 MUC2Q02817 5179 aa12.92□□□□□ -0.34
RBFOX1-219ENST00000569895 PPDPFQ9H3Y8 114 aa12.92□□□□□ -0.34
RBFOX1-219ENST00000569895 Q8NBF4 154 aa12.91□□□□□ -0.34
RBFOX1-219ENST00000569895 SPANXB1Q9NS25 103 aaPredicted RBP12.9□□□□□ -0.34
RBFOX1-219ENST00000569895 B5MCH6 92 aa12.89□□□□□ -0.35
RBFOX1-219ENST00000569895 S100A7L2Q5SY68 101 aa12.89□□□□□ -0.35
RBFOX1-219ENST00000569895 FP248Q71RG6 208 aaPredicted RBP12.89□□□□□ -0.35
RBFOX1-219ENST00000569895 PMCHL2Q9BQD1 86 aa12.89□□□□□ -0.35
RBFOX1-219ENST00000569895 NDUFC2O95298 119 aa12.88□□□□□ -0.35
RBFOX1-219ENST00000569895 SPINK1P00995 79 aa12.88□□□□□ -0.35
RBFOX1-219ENST00000569895 LINC00483Q53H64 154 aa12.88□□□□□ -0.35
RBFOX1-219ENST00000569895 GAGE2AQ6NT46 116 aa12.88□□□□□ -0.35
RBFOX1-219ENST00000569895 COLCA2A8K830 154 aa12.86□□□□□ -0.35
RBFOX1-219ENST00000569895 JOSD1Q15040 202 aaPredicted RBP12.84□□□□□ -0.35
RBFOX1-219ENST00000569895 Q6ZRX8 168 aa12.84□□□□□ -0.35
RBFOX1-219ENST00000569895 SLC7A5P1Q8MH63 180 aa12.83□□□□□ -0.36
RBFOX1-219ENST00000569895 ERC2-IT1O76042 136 aa12.82□□□□□ -0.36
RBFOX1-219ENST00000569895 IGLV6-57P01721 117 aa12.82□□□□□ -0.36
RBFOX1-219ENST00000569895 SSBP3-AS1Q7Z2R9 100 aa12.82□□□□□ -0.36
RBFOX1-219ENST00000569895 CBY1Q9Y3M2 126 aa12.82□□□□□ -0.36
RBFOX1-219ENST00000569895 IGLV9-49A0A0B4J1Y8 123 aa12.81□□□□□ -0.36
RBFOX1-219ENST00000569895 E9PLD3 99 aa12.81□□□□□ -0.36
RBFOX1-219ENST00000569895 TRAV23DV6A0A075B6W5 121 aa12.8□□□□□ -0.36
RBFOX1-219ENST00000569895 A0A0J9YXY3 114 aa12.8□□□□□ -0.36
RBFOX1-219ENST00000569895 Q9BRP9 147 aa12.8□□□□□ -0.36
RBFOX1-219ENST00000569895 MOBPQ13875 183 aa12.79□□□□□ -0.36
RBFOX1-219ENST00000569895 HINT1P49773 126 aaPredicted RBP12.78□□□□□ -0.36
RBFOX1-219ENST00000569895 NPC2P61916 151 aa12.77□□□□□ -0.37
RBFOX1-219ENST00000569895 ADAMTSL4-AS1Q5T5F5 129 aa12.77□□□□□ -0.37
RBFOX1-219ENST00000569895 ZNF73O43830 326 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms