RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 SPANXB1Q9NS25 103 aaPredicted RBP14.85□□□□□ -0.03
RAB40C-212ENST00000569575 ADAMTSL4-AS1Q5T5F5 129 aa14.84□□□□□ -0.03
RAB40C-212ENST00000569575 SCXQ7RTU7 201 aa14.84□□□□□ -0.03
RAB40C-212ENST00000569575 HIGD1BQ9P298 99 aa14.84□□□□□ -0.03
RAB40C-212ENST00000569575 TP73-AS1Q9UF72 201 aa14.84□□□□□ -0.03
RAB40C-212ENST00000569575 IGLV5-37A0A075B6J1 123 aa14.83□□□□□ -0.04
RAB40C-212ENST00000569575 XGP55808 180 aa14.82□□□□□ -0.04
RAB40C-212ENST00000569575 PKHD1P08F94 4074 aa14.82□□□□□ -0.04
RAB40C-212ENST00000569575 NDUFC2O95298 119 aa14.81□□□□□ -0.04
RAB40C-212ENST00000569575 A0A1W2PNN7 141 aa14.8□□□□□ -0.04
RAB40C-212ENST00000569575 LBHQ53QV2 105 aaPredicted RBP14.8□□□□□ -0.04
RAB40C-212ENST00000569575 DNAH5Q8TE73 4624 aa14.79□□□□□ -0.04
RAB40C-212ENST00000569575 SRSF9Q13242 221 aaKnown RBP eCLIP14.79□□□□□ -0.04
RAB40C-212ENST00000569575 DAND5Q8N907 189 aa14.79□□□□□ -0.04
RAB40C-212ENST00000569575 LINC00308Q8TCZ7 52 aa14.79□□□□□ -0.04
RAB40C-212ENST00000569575 UQCR10Q9UDW1 63 aa14.79□□□□□ -0.04
RAB40C-212ENST00000569575 NKAPP1Q8N9T2 125 aa14.78□□□□□ -0.04
RAB40C-212ENST00000569575 VPREB1P12018 145 aa14.76□□□□□ -0.05
RAB40C-212ENST00000569575 FAM19A5Q7Z5A7 132 aaPredicted RBP14.76□□□□□ -0.05
RAB40C-212ENST00000569575 FAM168BA1KXE4 195 aa14.75□□□□□ -0.05
RAB40C-212ENST00000569575 M0QXV9 152 aa14.75□□□□□ -0.05
RAB40C-212ENST00000569575 C7orf33Q8WU49 177 aa14.75□□□□□ -0.05
RAB40C-212ENST00000569575 C22orf24Q9Y442 160 aa14.75□□□□□ -0.05
RAB40C-212ENST00000569575 TRBV10-2A0A0K0K1G8 114 aa14.74□□□□□ -0.05
RAB40C-212ENST00000569575 TAL2Q16559 108 aa14.74□□□□□ -0.05
RAB40C-212ENST00000569575 SERTAD4-AS1Q5TG53 156 aa14.74□□□□□ -0.05
RAB40C-212ENST00000569575 LINC00518Q8N0U6 118 aa14.74□□□□□ -0.05
RAB40C-212ENST00000569575 C12orf57Q99622 126 aa14.74□□□□□ -0.05
RAB40C-212ENST00000569575 MRPL55Q7Z7F7 128 aaKnown RBP14.73□□□□□ -0.05
RAB40C-212ENST00000569575 KRTAP7-1Q8IUC3 87 aa14.73□□□□□ -0.05
RAB40C-212ENST00000569575 M0R378 163 aa14.72□□□□□ -0.05
RAB40C-212ENST00000569575 SOSTDC1Q6X4U4 206 aa14.71□□□□□ -0.05
RAB40C-212ENST00000569575 HIST1H4GQ99525 98 aa14.71□□□□□ -0.05
RAB40C-212ENST00000569575 DYNC1H1Q14204 4646 aaKnown RBP14.7□□□□□ -0.06
RAB40C-212ENST00000569575 LRP1BQ9NZR2 4599 aa14.7□□□□□ -0.06
RAB40C-212ENST00000569575 C2orf91Q6ZV80 131 aa14.7□□□□□ -0.06
RAB40C-212ENST00000569575 MUSTN1Q8IVN3 82 aa14.7□□□□□ -0.06
RAB40C-212ENST00000569575 CBY1Q9Y3M2 126 aa14.69□□□□□ -0.06
RAB40C-212ENST00000569575 TSTD3H0UI37 97 aa14.68□□□□□ -0.06
RAB40C-212ENST00000569575 NPC2P61916 151 aa14.67□□□□□ -0.06
RAB40C-212ENST00000569575 PHF5AQ7RTV0 110 aaKnown RBP14.66□□□□□ -0.06
RAB40C-212ENST00000569575 EIF4EBP3O60516 100 aaPredicted RBP14.65□□□□□ -0.06
RAB40C-212ENST00000569575 LINC00167Q96N53 147 aa14.65□□□□□ -0.06
RAB40C-212ENST00000569575 FAM229AH3BQW9 127 aa14.64□□□□□ -0.07
RAB40C-212ENST00000569575 UBE2BP63146 152 aa14.64□□□□□ -0.07
RAB40C-212ENST00000569575 Q8NDZ9 215 aa14.64□□□□□ -0.07
RAB40C-212ENST00000569575 EPPK1P58107 5090 aaKnown RBP14.64□□□□□ -0.07
RAB40C-212ENST00000569575 DNAH8Q96JB1 4490 aa14.64□□□□□ -0.07
RAB40C-212ENST00000569575 HAMPP81172 84 aa14.63□□□□□ -0.07
RAB40C-212ENST00000569575 IGLV1-50A0A075B6I6 118 aa14.62□□□□□ -0.07
RAB40C-212ENST00000569575 HNRNPA3P51991 378 aaKnown RBP14.62□□□□□ -0.07
RAB40C-212ENST00000569575 HSD52Q0P140 79 aa14.62□□□□□ -0.07
RAB40C-212ENST00000569575 LINC00528Q8N1L1 170 aa14.62□□□□□ -0.07
RAB40C-212ENST00000569575 TMEM126AQ9H061 195 aa14.61□□□□□ -0.07
RAB40C-212ENST00000569575 TMEM238LA0A1B0GVL6 79 aa14.6□□□□□ -0.07
RAB40C-212ENST00000569575 A6NJY4 79 aa14.6□□□□□ -0.07
RAB40C-212ENST00000569575 S100A7L2Q5SY68 101 aa14.6□□□□□ -0.07
RAB40C-212ENST00000569575 CEND1Q8N111 149 aa14.6□□□□□ -0.07
RAB40C-212ENST00000569575 PRO1933Q9H354 126 aa14.6□□□□□ -0.07
RAB40C-212ENST00000569575 TRAV13-2A0A0B4J235 113 aa14.59□□□□□ -0.07
RAB40C-212ENST00000569575 NCR3O14931 201 aa14.59□□□□□ -0.07
RAB40C-212ENST00000569575 PLA2G1BP04054 148 aaKnown RBP14.59□□□□□ -0.07
RAB40C-212ENST00000569575 PRR3P79522 188 aaKnown RBP14.59□□□□□ -0.07
RAB40C-212ENST00000569575 A4D1N5 150 aa14.58□□□□□ -0.08
RAB40C-212ENST00000569575 IGLV6-57P01721 117 aa14.58□□□□□ -0.08
RAB40C-212ENST00000569575 Q8N1X5 172 aa14.58□□□□□ -0.08
RAB40C-212ENST00000569575 IGKV2-28A0A075B6P5 120 aa14.57□□□□□ -0.08
RAB40C-212ENST00000569575 IGKV2D-28P01615 120 aa14.57□□□□□ -0.08
RAB40C-212ENST00000569575 SMR3BP02814 79 aaPredicted RBP14.57□□□□□ -0.08
RAB40C-212ENST00000569575 DDTP30046 118 aa14.57□□□□□ -0.08
RAB40C-212ENST00000569575 KCNQ1DNQ9H478 68 aa14.57□□□□□ -0.08
RAB40C-212ENST00000569575 GAGE10A6NGK3 116 aa14.56□□□□□ -0.08
RAB40C-212ENST00000569575 PRYO14603 147 aa14.55□□□□□ -0.08
RAB40C-212ENST00000569575 RPL37AP61513 92 aaKnown RBP14.55□□□□□ -0.08
RAB40C-212ENST00000569575 TRBV10-3A0A0K0K1G6 114 aa14.54□□□□□ -0.08
RAB40C-212ENST00000569575 RPL37AP8A6NKH3 93 aa14.54□□□□□ -0.08
RAB40C-212ENST00000569575 PSORS1C2Q9UIG4 136 aa14.54□□□□□ -0.08
RAB40C-212ENST00000569575 REG3GQ6UW15 175 aa14.52□□□□□ -0.09
RAB40C-212ENST00000569575 LINC00337Q8N6G1 96 aa14.52□□□□□ -0.09
RAB40C-212ENST00000569575 OR13C6PQ8NH95 151 aa14.52□□□□□ -0.09
RAB40C-212ENST00000569575 APOBP04114 4563 aaKnown RBP14.51□□□□□ -0.09
RAB40C-212ENST00000569575 A0A0B4J2C4 111 aa14.5□□□□□ -0.09
RAB40C-212ENST00000569575 A6NDN8 102 aa14.49□□□□□ -0.09
RAB40C-212ENST00000569575 M0R143 59 aa14.49□□□□□ -0.09
RAB40C-212ENST00000569575 BCE1O60756 84 aa14.49□□□□□ -0.09
RAB40C-212ENST00000569575 SPRR1AP35321 89 aa14.48□□□□□ -0.09
RAB40C-212ENST00000569575 C1orf137Q5JT78 98 aa14.48□□□□□ -0.09
RAB40C-212ENST00000569575 Q5VSD8 79 aa14.48□□□□□ -0.09
RAB40C-212ENST00000569575 KRTAP11-1Q8IUC1 163 aa14.48□□□□□ -0.09
RAB40C-212ENST00000569575 TRAV23DV6A0A075B6W5 121 aa14.47□□□□□ -0.09
RAB40C-212ENST00000569575 HINT1P49773 126 aaPredicted RBP14.46□□□□□ -0.09
RAB40C-212ENST00000569575 RAB37Q96AX2 223 aa14.46□□□□□ -0.09
RAB40C-212ENST00000569575 BIRC6Q9NR09 4857 aa14.45□□□□□ -0.1
RAB40C-212ENST00000569575 H0Y9J4 135 aa14.45□□□□□ -0.1
RAB40C-212ENST00000569575 CFC1BP0CG36 223 aa14.45□□□□□ -0.1
RAB40C-212ENST00000569575 CFC1P0CG37 223 aa14.45□□□□□ -0.1
RAB40C-212ENST00000569575 IGLV7-43P04211 117 aa14.44□□□□□ -0.1
RAB40C-212ENST00000569575 FXYD2P54710 66 aa14.44□□□□□ -0.1
RAB40C-212ENST00000569575 CTAG1AP78358 180 aa14.44□□□□□ -0.1
RAB40C-212ENST00000569575 ZNF73O43830 326 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms