RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 OXTP01178 125 aa5.54□□□□□ -1.52
GTF3C1-210ENST00000569394 LINC00158P58513 81 aa5.54□□□□□ -1.52
GTF3C1-210ENST00000569394 HSPB8Q9UJY1 196 aa5.54□□□□□ -1.52
GTF3C1-210ENST00000569394 ERG28Q9UKR5 140 aa5.54□□□□□ -1.52
GTF3C1-210ENST00000569394 IGLV7-43P04211 117 aa5.53□□□□□ -1.52
GTF3C1-210ENST00000569394 MEIG1Q5JSS6 88 aa5.53□□□□□ -1.52
GTF3C1-210ENST00000569394 SPINK6Q6UWN8 80 aa5.53□□□□□ -1.52
GTF3C1-210ENST00000569394 NKAPP1Q8N9T2 125 aa5.53□□□□□ -1.52
GTF3C1-210ENST00000569394 MAP1LC3CQ9BXW4 147 aa5.53□□□□□ -1.52
GTF3C1-210ENST00000569394 ATP6V1G1O75348 118 aa5.52□□□□□ -1.53
GTF3C1-210ENST00000569394 SMIM13P0DJ93 91 aa5.52□□□□□ -1.53
GTF3C1-210ENST00000569394 SRSF9Q13242 221 aaKnown RBP eCLIP5.52□□□□□ -1.53
GTF3C1-210ENST00000569394 MRPL55Q7Z7F7 128 aaKnown RBP5.52□□□□□ -1.53
GTF3C1-210ENST00000569394 LINC00167Q96N53 147 aa5.52□□□□□ -1.53
GTF3C1-210ENST00000569394 SND1-IT1Q9HBX3 110 aa5.52□□□□□ -1.53
GTF3C1-210ENST00000569394 IGKV2-28A0A075B6P5 120 aa5.51□□□□□ -1.53
GTF3C1-210ENST00000569394 DPM2O94777 84 aa5.51□□□□□ -1.53
GTF3C1-210ENST00000569394 IGKV2D-28P01615 120 aa5.51□□□□□ -1.53
GTF3C1-210ENST00000569394 IGKCP01834 107 aa5.51□□□□□ -1.53
GTF3C1-210ENST00000569394 TSPEAR-AS2P59090 65 aa5.51□□□□□ -1.53
GTF3C1-210ENST00000569394 LBHQ53QV2 105 aaPredicted RBP5.51□□□□□ -1.53
GTF3C1-210ENST00000569394 REG3GQ6UW15 175 aa5.51□□□□□ -1.53
GTF3C1-210ENST00000569394 DAND5Q8N907 189 aa5.5□□□□□ -1.53
GTF3C1-210ENST00000569394 NDUFA12Q9UI09 145 aa5.5□□□□□ -1.53
GTF3C1-210ENST00000569394 MT1HL1P0DM35 61 aa5.49□□□□□ -1.53
GTF3C1-210ENST00000569394 PLNP26678 52 aa5.49□□□□□ -1.53
GTF3C1-210ENST00000569394 KRTDAPP60985 99 aa5.49□□□□□ -1.53
GTF3C1-210ENST00000569394 NPC2P61916 151 aa5.49□□□□□ -1.53
GTF3C1-210ENST00000569394 Q8NDZ9 215 aa5.49□□□□□ -1.53
GTF3C1-210ENST00000569394 SYS1-DBNDD2H3BUS1 97 aa5.48□□□□□ -1.53
GTF3C1-210ENST00000569394 J3QQQ9 107 aa5.48□□□□□ -1.53
GTF3C1-210ENST00000569394 NCR3O14931 201 aa5.48□□□□□ -1.53
GTF3C1-210ENST00000569394 LEPROTO15243 131 aa5.48□□□□□ -1.53
GTF3C1-210ENST00000569394 LGALS3P17931 250 aaKnown RBP5.48□□□□□ -1.53
GTF3C1-210ENST00000569394 HERVK_113P61574 105 aa5.48□□□□□ -1.53
GTF3C1-210ENST00000569394 MIR7-3HGQ8N6C7 128 aa5.48□□□□□ -1.53
GTF3C1-210ENST00000569394 DIRC1Q969H9 104 aa5.48□□□□□ -1.53
GTF3C1-210ENST00000569394 LINC01600Q96MT4 127 aa5.48□□□□□ -1.53
GTF3C1-210ENST00000569394 MYMXA0A1B0GTQ4 84 aa5.47□□□□□ -1.53
GTF3C1-210ENST00000569394 TMEM238C9JI98 176 aa5.47□□□□□ -1.53
GTF3C1-210ENST00000569394 VPREB1P12018 145 aa5.47□□□□□ -1.53
GTF3C1-210ENST00000569394 COX17Q14061 63 aa5.47□□□□□ -1.53
GTF3C1-210ENST00000569394 BOD1L2Q8IYS8 172 aa5.47□□□□□ -1.53
GTF3C1-210ENST00000569394 PRR26Q8N8Z3 221 aa5.47□□□□□ -1.53
GTF3C1-210ENST00000569394 PLEKHB2Q96CS7 222 aa5.47□□□□□ -1.53
GTF3C1-210ENST00000569394 H0Y9J4 135 aa5.46□□□□□ -1.54
GTF3C1-210ENST00000569394 C3orf79P0CE67 100 aa5.46□□□□□ -1.54
GTF3C1-210ENST00000569394 UBE2AP49459 152 aa5.46□□□□□ -1.54
GTF3C1-210ENST00000569394 RPL24P83731 157 aaKnown RBP5.46□□□□□ -1.54
GTF3C1-210ENST00000569394 ATOH7Q8N100 152 aa5.46□□□□□ -1.54
GTF3C1-210ENST00000569394 TP73-AS1Q9UF72 201 aa5.46□□□□□ -1.54
GTF3C1-210ENST00000569394 ZNF861PO60384 105 aa5.45□□□□□ -1.54
GTF3C1-210ENST00000569394 BCE1O60756 84 aa5.45□□□□□ -1.54
GTF3C1-210ENST00000569394 S100A1P23297 94 aa5.45□□□□□ -1.54
GTF3C1-210ENST00000569394 PRLHP81277 87 aa5.45□□□□□ -1.54
GTF3C1-210ENST00000569394 SFTA2Q6UW10 78 aa5.45□□□□□ -1.54
GTF3C1-210ENST00000569394 FAM19A1Q7Z5A9 133 aa5.45□□□□□ -1.54
GTF3C1-210ENST00000569394 TNXBP22105 4242 aa5.44□□□□□ -1.54
GTF3C1-210ENST00000569394 IGLV5-37A0A075B6J1 123 aa5.44□□□□□ -1.54
GTF3C1-210ENST00000569394 HERV-K104P63124 156 aa5.44□□□□□ -1.54
GTF3C1-210ENST00000569394 UBR4Q5T4S7 5183 aa5.44□□□□□ -1.54
GTF3C1-210ENST00000569394 PET117Q6UWS5 81 aa5.44□□□□□ -1.54
GTF3C1-210ENST00000569394 TTTY13Q9BZ97 58 aa5.44□□□□□ -1.54
GTF3C1-210ENST00000569394 ANAPC11Q9NYG5 84 aa5.44□□□□□ -1.54
GTF3C1-210ENST00000569394 IGLV1-50A0A075B6I6 118 aa5.43□□□□□ -1.54
GTF3C1-210ENST00000569394 RPL28P46779 137 aaKnown RBP5.43□□□□□ -1.54
GTF3C1-210ENST00000569394 LINC01545Q5VT33 79 aa5.43□□□□□ -1.54
GTF3C1-210ENST00000569394 IGKV2D-26A0A0A0MRZ7 120 aa5.42□□□□□ -1.54
GTF3C1-210ENST00000569394 A0A0J9YXY3 114 aa5.42□□□□□ -1.54
GTF3C1-210ENST00000569394 E9PLD3 99 aa5.42□□□□□ -1.54
GTF3C1-210ENST00000569394 KRTAP10-8P60410 259 aa5.42□□□□□ -1.54
GTF3C1-210ENST00000569394 TMEM126AQ9H061 195 aa5.42□□□□□ -1.54
GTF3C1-210ENST00000569394 LINC00587B1AMM8 73 aa5.41□□□□□ -1.54
GTF3C1-210ENST00000569394 M0R378 163 aa5.41□□□□□ -1.54
GTF3C1-210ENST00000569394 KRTAP1-4P0C5Y4 121 aa5.41□□□□□ -1.54
GTF3C1-210ENST00000569394 S100A2P29034 98 aa5.41□□□□□ -1.54
GTF3C1-210ENST00000569394 COA6Q5JTJ3 125 aaKnown RBP5.41□□□□□ -1.54
GTF3C1-210ENST00000569394 ADAMTSL4-AS1Q5T5F5 129 aa5.41□□□□□ -1.54
GTF3C1-210ENST00000569394 MIEN1Q9BRT3 115 aa5.41□□□□□ -1.54
GTF3C1-210ENST00000569394 HIGD2AQ9BW72 106 aa5.41□□□□□ -1.54
GTF3C1-210ENST00000569394 KRTAP23-1A1A580 65 aa5.4□□□□□ -1.54
GTF3C1-210ENST00000569394 ZNF815PA8K554 130 aa5.4□□□□□ -1.54
GTF3C1-210ENST00000569394 NMUP48645 174 aa5.4□□□□□ -1.54
GTF3C1-210ENST00000569394 TRBV10-3A0A0K0K1G6 114 aa5.39□□□□□ -1.55
GTF3C1-210ENST00000569394 C20orf202A1L168 122 aa5.39□□□□□ -1.55
GTF3C1-210ENST00000569394 TRIAP1O43715 76 aa5.39□□□□□ -1.55
GTF3C1-210ENST00000569394 S100A6P06703 90 aa5.39□□□□□ -1.55
GTF3C1-210ENST00000569394 SOSTDC1Q6X4U4 206 aa5.39□□□□□ -1.55
GTF3C1-210ENST00000569394 TSPAN13O95857 204 aa5.38□□□□□ -1.55
GTF3C1-210ENST00000569394 SNRPEP62304 92 aaKnown RBP5.38□□□□□ -1.55
GTF3C1-210ENST00000569394 HIST3H2BBQ8N257 126 aa5.38□□□□□ -1.55
GTF3C1-210ENST00000569394 HMCN2Q8NDA2 5059 aa5.38□□□□□ -1.55
GTF3C1-210ENST00000569394 A0A087X002 238 aa5.37□□□□□ -1.55
GTF3C1-210ENST00000569394 ETDCA0A1B0GVM5 59 aa5.37□□□□□ -1.55
GTF3C1-210ENST00000569394 DDTP30046 118 aa5.37□□□□□ -1.55
GTF3C1-210ENST00000569394 S100A7L2Q5SY68 101 aa5.37□□□□□ -1.55
GTF3C1-210ENST00000569394 SCGB1D4Q6XE38 83 aa5.37□□□□□ -1.55
GTF3C1-210ENST00000569394 HIST1H2BLQ99880 126 aa5.37□□□□□ -1.55
GTF3C1-210ENST00000569394 KRTAP13-1Q8IUC0 172 aa5.36□□□□□ -1.55
GTF3C1-210ENST00000569394 PCP2Q8IVA1 136 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms