RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 FAM19A1Q7Z5A9 133 aa10.92□□□□□ -0.66
CPNE7-209ENST00000568977 CHCHD1Q96BP2 118 aaKnown RBP10.92□□□□□ -0.66
CPNE7-209ENST00000568977 KRTAP13-2Q52LG2 175 aa10.91□□□□□ -0.66
CPNE7-209ENST00000568977 TRAV12-1A0A0B4J245 112 aa10.9□□□□□ -0.66
CPNE7-209ENST00000568977 TMEM223A0PJW6 202 aa10.9□□□□□ -0.66
CPNE7-209ENST00000568977 M0R378 163 aa10.9□□□□□ -0.66
CPNE7-209ENST00000568977 FAM229BQ4G0N7 80 aa10.9□□□□□ -0.66
CPNE7-209ENST00000568977 IFI27L1Q96BM0 104 aa10.9□□□□□ -0.66
CPNE7-209ENST00000568977 LINC00158P58513 81 aa10.89□□□□□ -0.67
CPNE7-209ENST00000568977 A0A0U1RRA0 63 aa10.88□□□□□ -0.67
CPNE7-209ENST00000568977 HSBP1O75506 76 aa10.85□□□□□ -0.67
CPNE7-209ENST00000568977 IGKV2D-26A0A0A0MRZ7 120 aa10.84□□□□□ -0.67
CPNE7-209ENST00000568977 CBLN2Q8IUK8 224 aa10.84□□□□□ -0.67
CPNE7-209ENST00000568977 FAM19A2Q8N3H0 131 aa10.84□□□□□ -0.67
CPNE7-209ENST00000568977 LINC00304Q8N9R0 145 aa10.84□□□□□ -0.67
CPNE7-209ENST00000568977 SMIM13P0DJ93 91 aa10.83□□□□□ -0.68
CPNE7-209ENST00000568977 MEIG1Q5JSS6 88 aa10.83□□□□□ -0.68
CPNE7-209ENST00000568977 HIGD2AQ9BW72 106 aa10.83□□□□□ -0.68
CPNE7-209ENST00000568977 PLEKHB2Q96CS7 222 aa10.82□□□□□ -0.68
CPNE7-209ENST00000568977 ATP6V1G1O75348 118 aa10.81□□□□□ -0.68
CPNE7-209ENST00000568977 HERV-K104P63124 156 aa10.81□□□□□ -0.68
CPNE7-209ENST00000568977 MIR7-3HGQ8N6C7 128 aa10.81□□□□□ -0.68
CPNE7-209ENST00000568977 H0Y8G0 127 aa10.8□□□□□ -0.68
CPNE7-209ENST00000568977 BOD1L2Q8IYS8 172 aa10.8□□□□□ -0.68
CPNE7-209ENST00000568977 RETNLBQ9BQ08 111 aa10.8□□□□□ -0.68
CPNE7-209ENST00000568977 NDUFA12Q9UI09 145 aa10.79□□□□□ -0.68
CPNE7-209ENST00000568977 PRYO14603 147 aa10.78□□□□□ -0.68
CPNE7-209ENST00000568977 NCR3O14931 201 aa10.78□□□□□ -0.68
CPNE7-209ENST00000568977 TRGC2P03986 189 aa10.78□□□□□ -0.68
CPNE7-209ENST00000568977 C3orf22Q8N5N4 141 aa10.77□□□□□ -0.69
CPNE7-209ENST00000568977 LINC00587B1AMM8 73 aa10.76□□□□□ -0.69
CPNE7-209ENST00000568977 SERF1AO75920 110 aa10.76□□□□□ -0.69
CPNE7-209ENST00000568977 LEPROTL1O95214 131 aa10.76□□□□□ -0.69
CPNE7-209ENST00000568977 LINC00310P59036 64 aa10.76□□□□□ -0.69
CPNE7-209ENST00000568977 SPRR4Q96PI1 79 aa10.76□□□□□ -0.69
CPNE7-209ENST00000568977 MYMXA0A1B0GTQ4 84 aa10.75□□□□□ -0.69
CPNE7-209ENST00000568977 TSPEAR-AS2P59090 65 aa10.75□□□□□ -0.69
CPNE7-209ENST00000568977 MUC2Q02817 5179 aa10.74□□□□□ -0.69
CPNE7-209ENST00000568977 SPRR1AP35321 89 aa10.74□□□□□ -0.69
CPNE7-209ENST00000568977 LINC00337Q8N6G1 96 aa10.74□□□□□ -0.69
CPNE7-209ENST00000568977 MAP1LC3CQ9BXW4 147 aa10.74□□□□□ -0.69
CPNE7-209ENST00000568977 SLC7A5P1Q8MH63 180 aa10.73□□□□□ -0.69
CPNE7-209ENST00000568977 KCNQ1DNQ9H478 68 aa10.73□□□□□ -0.69
CPNE7-209ENST00000568977 ZNF706Q9Y5V0 76 aaPredicted RBP10.73□□□□□ -0.69
CPNE7-209ENST00000568977 TRBV10-3A0A0K0K1G6 114 aa10.72□□□□□ -0.69
CPNE7-209ENST00000568977 PLNP26678 52 aa10.72□□□□□ -0.69
CPNE7-209ENST00000568977 CTAG1AP78358 180 aa10.72□□□□□ -0.69
CPNE7-209ENST00000568977 KRTAP4-16G5E9R7 235 aaPredicted RBP10.71□□□□□ -0.69
CPNE7-209ENST00000568977 LEPROTO15243 131 aa10.71□□□□□ -0.69
CPNE7-209ENST00000568977 ETDCA0A1B0GVM5 59 aa10.7□□□□□ -0.7
CPNE7-209ENST00000568977 DAND5Q8N907 189 aa10.7□□□□□ -0.7
CPNE7-209ENST00000568977 HSPB8Q9UJY1 196 aa10.7□□□□□ -0.7
CPNE7-209ENST00000568977 DPM2O94777 84 aa10.69□□□□□ -0.7
CPNE7-209ENST00000568977 IGLV7-46A0A075B6I9 117 aa10.68□□□□□ -0.7
CPNE7-209ENST00000568977 J3QQQ9 107 aa10.68□□□□□ -0.7
CPNE7-209ENST00000568977 FABP4P15090 132 aa10.68□□□□□ -0.7
CPNE7-209ENST00000568977 HERVK_113P61574 105 aa10.68□□□□□ -0.7
CPNE7-209ENST00000568977 TPRXLQ17RH7 258 aa10.68□□□□□ -0.7
CPNE7-209ENST00000568977 SMCR5Q8TEV8 140 aa10.68□□□□□ -0.7
CPNE7-209ENST00000568977 PMCHL2Q9BQD1 86 aa10.68□□□□□ -0.7
CPNE7-209ENST00000568977 S100A12P80511 92 aa10.67□□□□□ -0.7
CPNE7-209ENST00000568977 SPAG11AQ6PDA7 123 aa10.67□□□□□ -0.7
CPNE7-209ENST00000568977 LOC107984156A0A0G2JMH3 177 aa10.66□□□□□ -0.7
CPNE7-209ENST00000568977 ARL17AQ8IVW1 177 aa10.66□□□□□ -0.7
CPNE7-209ENST00000568977 MUC17Q685J3 4493 aa10.65□□□□□ -0.7
CPNE7-209ENST00000568977 A0A0U1RQV1 116 aa10.65□□□□□ -0.7
CPNE7-209ENST00000568977 IGKCP01834 107 aa10.65□□□□□ -0.7
CPNE7-209ENST00000568977 LGALS3P17931 250 aaKnown RBP10.65□□□□□ -0.7
CPNE7-209ENST00000568977 NMUP48645 174 aa10.65□□□□□ -0.7
CPNE7-209ENST00000568977 MIEN1Q9BRT3 115 aa10.65□□□□□ -0.7
CPNE7-209ENST00000568977 CDIP1Q9H305 208 aa10.65□□□□□ -0.7
CPNE7-209ENST00000568977 PPDPFQ9H3Y8 114 aa10.65□□□□□ -0.7
CPNE7-209ENST00000568977 TRBV10-2A0A0K0K1G8 114 aa10.64□□□□□ -0.71
CPNE7-209ENST00000568977 DDTP30046 118 aa10.64□□□□□ -0.71
CPNE7-209ENST00000568977 COLCA2A8K830 154 aa10.63□□□□□ -0.71
CPNE7-209ENST00000568977 B5MCH6 92 aa10.63□□□□□ -0.71
CPNE7-209ENST00000568977 Q8NBF4 154 aa10.63□□□□□ -0.71
CPNE7-209ENST00000568977 SPANXB1Q9NS25 103 aaPredicted RBP10.63□□□□□ -0.71
CPNE7-209ENST00000568977 LINC00483Q53H64 154 aa10.62□□□□□ -0.71
CPNE7-209ENST00000568977 C4orf48Q5BLP8 95 aa10.62□□□□□ -0.71
CPNE7-209ENST00000568977 ERC2-IT1O76042 136 aa10.6□□□□□ -0.71
CPNE7-209ENST00000568977 NDUFC2O95298 119 aa10.6□□□□□ -0.71
CPNE7-209ENST00000568977 GAGE2AQ6NT46 116 aa10.6□□□□□ -0.71
CPNE7-209ENST00000568977 Q6ZRX8 168 aa10.59□□□□□ -0.71
CPNE7-209ENST00000568977 Q9BRP9 147 aa10.59□□□□□ -0.71
CPNE7-209ENST00000568977 IGLV6-57P01721 117 aa10.58□□□□□ -0.72
CPNE7-209ENST00000568977 S100A7L2Q5SY68 101 aa10.58□□□□□ -0.72
CPNE7-209ENST00000568977 SOSTDC1Q6X4U4 206 aa10.58□□□□□ -0.72
CPNE7-209ENST00000568977 FP248Q71RG6 208 aaPredicted RBP10.58□□□□□ -0.72
CPNE7-209ENST00000568977 A0A0J9YXY3 114 aa10.57□□□□□ -0.72
CPNE7-209ENST00000568977 E9PLD3 99 aa10.57□□□□□ -0.72
CPNE7-209ENST00000568977 NPC2P61916 151 aa10.57□□□□□ -0.72
CPNE7-209ENST00000568977 TRAV23DV6A0A075B6W5 121 aa10.56□□□□□ -0.72
CPNE7-209ENST00000568977 EIF4EBP3O60516 100 aaPredicted RBP10.56□□□□□ -0.72
CPNE7-209ENST00000568977 MOBPQ13875 183 aa10.56□□□□□ -0.72
CPNE7-209ENST00000568977 IGLV9-49A0A0B4J1Y8 123 aa10.55□□□□□ -0.72
CPNE7-209ENST00000568977 SPINK1P00995 79 aa10.55□□□□□ -0.72
CPNE7-209ENST00000568977 ADAMTSL4-AS1Q5T5F5 129 aa10.55□□□□□ -0.72
CPNE7-209ENST00000568977 FAT4Q6V0I7 4981 aa10.53□□□□□ -0.72
CPNE7-209ENST00000568977 SYS1-DBNDD2H3BUS1 97 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms