RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 IGKV2D-28P01615 120 aa17.47■□□□□ 0.39
RAB40C-211ENST00000568586 LINC00158P58513 81 aa17.46■□□□□ 0.39
RAB40C-211ENST00000568586 HERV-K104P63124 156 aa17.43■□□□□ 0.38
RAB40C-211ENST00000568586 UBE2AP49459 152 aa17.42■□□□□ 0.38
RAB40C-211ENST00000568586 TMEM126AQ9H061 195 aa17.42■□□□□ 0.38
RAB40C-211ENST00000568586 HSPB8Q9UJY1 196 aa17.42■□□□□ 0.38
RAB40C-211ENST00000568586 SMIM13P0DJ93 91 aa17.4■□□□□ 0.38
RAB40C-211ENST00000568586 H0Y8G0 127 aa17.39■□□□□ 0.37
RAB40C-211ENST00000568586 M0R378 163 aa17.39■□□□□ 0.37
RAB40C-211ENST00000568586 PLNP26678 52 aa17.39■□□□□ 0.37
RAB40C-211ENST00000568586 NDUFA12Q9UI09 145 aa17.39■□□□□ 0.37
RAB40C-211ENST00000568586 A0A087X002 238 aa17.38■□□□□ 0.37
RAB40C-211ENST00000568586 A0A0U1RRA0 63 aa17.38■□□□□ 0.37
RAB40C-211ENST00000568586 LINC00587B1AMM8 73 aa17.38■□□□□ 0.37
RAB40C-211ENST00000568586 TMEM238C9JI98 176 aa17.38■□□□□ 0.37
RAB40C-211ENST00000568586 MYMXA0A1B0GTQ4 84 aa17.36■□□□□ 0.37
RAB40C-211ENST00000568586 CRYGAP11844 174 aa17.36■□□□□ 0.37
RAB40C-211ENST00000568586 LEPROTO15243 131 aa17.35■□□□□ 0.37
RAB40C-211ENST00000568586 FABP4P15090 132 aa17.35■□□□□ 0.37
RAB40C-211ENST00000568586 MEIG1Q5JSS6 88 aa17.35■□□□□ 0.37
RAB40C-211ENST00000568586 TSPEAR-AS2P59090 65 aa17.34■□□□□ 0.37
RAB40C-211ENST00000568586 MIR7-3HGQ8N6C7 128 aa17.34■□□□□ 0.37
RAB40C-211ENST00000568586 DPM2O94777 84 aa17.33■□□□□ 0.36
RAB40C-211ENST00000568586 PRLHP81277 87 aa17.33■□□□□ 0.36
RAB40C-211ENST00000568586 PLEKHB2Q96CS7 222 aa17.33■□□□□ 0.36
RAB40C-211ENST00000568586 LPAP08519 4548 aa17.32■□□□□ 0.36
RAB40C-211ENST00000568586 ATP6V1G1O75348 118 aa17.32■□□□□ 0.36
RAB40C-211ENST00000568586 FAM229BQ4G0N7 80 aa17.32■□□□□ 0.36
RAB40C-211ENST00000568586 FAM19A1Q7Z5A9 133 aa17.32■□□□□ 0.36
RAB40C-211ENST00000568586 RNF213Q63HN8 5207 aa17.31■□□□□ 0.36
RAB40C-211ENST00000568586 LOC107984156A0A0G2JMH3 177 aa17.3■□□□□ 0.36
RAB40C-211ENST00000568586 ARL17AQ8IVW1 177 aa17.3■□□□□ 0.36
RAB40C-211ENST00000568586 BOD1L2Q8IYS8 172 aa17.3■□□□□ 0.36
RAB40C-211ENST00000568586 MAP1LC3CQ9BXW4 147 aa17.29■□□□□ 0.36
RAB40C-211ENST00000568586 ANAPC11Q9NYG5 84 aa17.29■□□□□ 0.36
RAB40C-211ENST00000568586 IGKV2D-26A0A0A0MRZ7 120 aa17.28■□□□□ 0.36
RAB40C-211ENST00000568586 IGKCP01834 107 aa17.28■□□□□ 0.36
RAB40C-211ENST00000568586 J3QQQ9 107 aa17.27■□□□□ 0.36
RAB40C-211ENST00000568586 HIST1H2BKO60814 126 aa17.27■□□□□ 0.36
RAB40C-211ENST00000568586 HIST1H2BJP06899 126 aa17.27■□□□□ 0.36
RAB40C-211ENST00000568586 HIST1H2BOP23527 126 aa17.27■□□□□ 0.36
RAB40C-211ENST00000568586 HIST1H2BBP33778 126 aa17.27■□□□□ 0.36
RAB40C-211ENST00000568586 HIST1H2BDP58876 126 aa17.27■□□□□ 0.36
RAB40C-211ENST00000568586 HIST1H2BCP62807 126 aa17.27■□□□□ 0.36
RAB40C-211ENST00000568586 HIST2H2BEQ16778 126 aa17.27■□□□□ 0.36
RAB40C-211ENST00000568586 KRTAP13-2Q52LG2 175 aa17.27■□□□□ 0.36
RAB40C-211ENST00000568586 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.27■□□□□ 0.36
RAB40C-211ENST00000568586 TYMSOSQ8TAI1 123 aa17.27■□□□□ 0.36
RAB40C-211ENST00000568586 HIST1H2BHQ93079 126 aa17.27■□□□□ 0.36
RAB40C-211ENST00000568586 HIST1H2BNQ99877 126 aa17.27■□□□□ 0.36
RAB40C-211ENST00000568586 HIST1H2BMQ99879 126 aa17.27■□□□□ 0.36
RAB40C-211ENST00000568586 PMCHL2Q9BQD1 86 aa17.27■□□□□ 0.36
RAB40C-211ENST00000568586 NMUP48645 174 aa17.26■□□□□ 0.35
RAB40C-211ENST00000568586 HERVK_113P61574 105 aa17.26■□□□□ 0.35
RAB40C-211ENST00000568586 KCNQ1DNQ9H478 68 aa17.24■□□□□ 0.35
RAB40C-211ENST00000568586 PRYO14603 147 aa17.22■□□□□ 0.35
RAB40C-211ENST00000568586 SPRR1AP35321 89 aa17.22■□□□□ 0.35
RAB40C-211ENST00000568586 LINC00337Q8N6G1 96 aa17.19■□□□□ 0.34
RAB40C-211ENST00000568586 KRTAP4-16G5E9R7 235 aaPredicted RBP17.18■□□□□ 0.34
RAB40C-211ENST00000568586 NCR3O14931 201 aa17.18■□□□□ 0.34
RAB40C-211ENST00000568586 LGALS3P17931 250 aaKnown RBP17.18■□□□□ 0.34
RAB40C-211ENST00000568586 SYS1-DBNDD2H3BUS1 97 aa17.17■□□□□ 0.34
RAB40C-211ENST00000568586 DAND5Q8N907 189 aa17.17■□□□□ 0.34
RAB40C-211ENST00000568586 E9PLD3 99 aa17.16■□□□□ 0.34
RAB40C-211ENST00000568586 HIGD2AQ9BW72 106 aa17.16■□□□□ 0.34
RAB40C-211ENST00000568586 TRBV10-3A0A0K0K1G6 114 aa17.15■□□□□ 0.34
RAB40C-211ENST00000568586 TRBV10-2A0A0K0K1G8 114 aa17.15■□□□□ 0.34
RAB40C-211ENST00000568586 TSPAN13O95857 204 aa17.14■□□□□ 0.33
RAB40C-211ENST00000568586 PRR4Q16378 134 aa17.12■□□□□ 0.33
RAB40C-211ENST00000568586 LINC01545Q5VT33 79 aa17.12■□□□□ 0.33
RAB40C-211ENST00000568586 SPRR4Q96PI1 79 aa17.12■□□□□ 0.33
RAB40C-211ENST00000568586 CTAG1AP78358 180 aa17.11■□□□□ 0.33
RAB40C-211ENST00000568586 COA6Q5JTJ3 125 aaKnown RBP17.11■□□□□ 0.33
RAB40C-211ENST00000568586 NDUFC2O95298 119 aa17.1■□□□□ 0.33
RAB40C-211ENST00000568586 A0A0J9YXY3 114 aa17.09■□□□□ 0.33
RAB40C-211ENST00000568586 PET117Q6UWS5 81 aa17.09■□□□□ 0.33
RAB40C-211ENST00000568586 LINC00304Q8N9R0 145 aa17.09■□□□□ 0.33
RAB40C-211ENST00000568586 SPANXB1Q9NS25 103 aaPredicted RBP17.09■□□□□ 0.33
RAB40C-211ENST00000568586 ADAMTSL4-AS1Q5T5F5 129 aa17.07■□□□□ 0.32
RAB40C-211ENST00000568586 ZNF706Q9Y5V0 76 aaPredicted RBP17.07■□□□□ 0.32
RAB40C-211ENST00000568586 ETDCA0A1B0GVM5 59 aa17.06■□□□□ 0.32
RAB40C-211ENST00000568586 S100A12P80511 92 aa17.06■□□□□ 0.32
RAB40C-211ENST00000568586 MIEN1Q9BRT3 115 aa17.06■□□□□ 0.32
RAB40C-211ENST00000568586 DDTP30046 118 aa17.05■□□□□ 0.32
RAB40C-211ENST00000568586 SOSTDC1Q6X4U4 206 aa17.05■□□□□ 0.32
RAB40C-211ENST00000568586 IGLV6-57P01721 117 aa17.04■□□□□ 0.32
RAB40C-211ENST00000568586 SMCR5Q8TEV8 140 aa17.04■□□□□ 0.32
RAB40C-211ENST00000568586 B5MCH6 92 aa17.03■□□□□ 0.32
RAB40C-211ENST00000568586 C3orf22Q8N5N4 141 aa17.03■□□□□ 0.32
RAB40C-211ENST00000568586 EIF4EBP3O60516 100 aaPredicted RBP17.02■□□□□ 0.32
RAB40C-211ENST00000568586 C3orf79P0CE67 100 aa17■□□□□ 0.31
RAB40C-211ENST00000568586 LITAFQ99732 161 aa17■□□□□ 0.31
RAB40C-211ENST00000568586 TIMM17BO60830 172 aa16.98■□□□□ 0.31
RAB40C-211ENST00000568586 LINC00483Q53H64 154 aa16.97■□□□□ 0.31
RAB40C-211ENST00000568586 S100A7L2Q5SY68 101 aa16.95■□□□□ 0.3
RAB40C-211ENST00000568586 Q6ZRX8 168 aa16.95■□□□□ 0.3
RAB40C-211ENST00000568586 SPAG11AQ6PDA7 123 aa16.94■□□□□ 0.3
RAB40C-211ENST00000568586 NPC2P61916 151 aa16.93■□□□□ 0.3
RAB40C-211ENST00000568586 Q9BRP9 147 aa16.93■□□□□ 0.3
RAB40C-211ENST00000568586 LINC00308Q8TCZ7 52 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms