RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 PLAC8L1A1L4L8 177 aa8.6□□□□□ -1.03
CSPG4P13-202ENST00000567704 KIAA0087Q14695 138 aa8.6□□□□□ -1.03
CSPG4P13-202ENST00000567704 hDV103S1A0JD37 113 aa8.6□□□□□ -1.03
CSPG4P13-202ENST00000567704 REG3GQ6UW15 175 aa8.6□□□□□ -1.03
CSPG4P13-202ENST00000567704 INAFM1C9JVW0 142 aa8.58□□□□□ -1.04
CSPG4P13-202ENST00000567704 LAMA3Q16787 3333 aa8.58□□□□□ -1.04
CSPG4P13-202ENST00000567704 K7ERS5 55 aa8.58□□□□□ -1.04
CSPG4P13-202ENST00000567704 LOC110117498A0A087WWA1 95 aa8.58□□□□□ -1.04
CSPG4P13-202ENST00000567704 LINC00474Q9P2X8 69 aa8.58□□□□□ -1.04
CSPG4P13-202ENST00000567704 BPTFQ12830 3046 aa8.57□□□□□ -1.04
CSPG4P13-202ENST00000567704 LIMD2Q9BT23 127 aa8.57□□□□□ -1.04
CSPG4P13-202ENST00000567704 LINC00336Q6ZUF6 198 aa8.57□□□□□ -1.04
CSPG4P13-202ENST00000567704 Q9BRP9 147 aa8.57□□□□□ -1.04
CSPG4P13-202ENST00000567704 C1orf64Q8NEQ6 169 aa8.56□□□□□ -1.04
CSPG4P13-202ENST00000567704 IGHV6-1A0A0B4J1U7 121 aa8.56□□□□□ -1.04
CSPG4P13-202ENST00000567704 C2orf48Q96LS8 159 aa8.56□□□□□ -1.04
CSPG4P13-202ENST00000567704 KRTAP10-9P60411 292 aa8.55□□□□□ -1.04
CSPG4P13-202ENST00000567704 LYPD5Q6UWN5 251 aa8.55□□□□□ -1.04
CSPG4P13-202ENST00000567704 F8P00451 2351 aa8.55□□□□□ -1.04
CSPG4P13-202ENST00000567704 Q6ZTC4 211 aa8.54□□□□□ -1.04
CSPG4P13-202ENST00000567704 C6orf48Q9UBA6 75 aa8.54□□□□□ -1.04
CSPG4P13-202ENST00000567704 ACANP16112 2415 aa8.53□□□□□ -1.04
CSPG4P13-202ENST00000567704 OXLD1Q5BKU9 147 aa8.52□□□□□ -1.05
CSPG4P13-202ENST00000567704 PRLHP81277 87 aa8.52□□□□□ -1.05
CSPG4P13-202ENST00000567704 C7orf33Q8WU49 177 aa8.52□□□□□ -1.05
CSPG4P13-202ENST00000567704 ELOF1P60002 83 aaKnown RBP8.51□□□□□ -1.05
CSPG4P13-202ENST00000567704 COL27A1Q8IZC6 1860 aaPredicted RBP8.51□□□□□ -1.05
CSPG4P13-202ENST00000567704 ZNF706Q9Y5V0 76 aaPredicted RBP8.51□□□□□ -1.05
CSPG4P13-202ENST00000567704 C5orf42Q9H799 3197 aa8.51□□□□□ -1.05
CSPG4P13-202ENST00000567704 KLK9Q2XQG4 91 aa8.49□□□□□ -1.05
CSPG4P13-202ENST00000567704 KLKP1Q107X0 134 aa8.49□□□□□ -1.05
CSPG4P13-202ENST00000567704 C9orf129Q5T035 196 aaKnown RBP8.49□□□□□ -1.05
CSPG4P13-202ENST00000567704 C22orf24Q9Y442 160 aa8.49□□□□□ -1.05
CSPG4P13-202ENST00000567704 H7BZZ5 65 aa8.48□□□□□ -1.05
CSPG4P13-202ENST00000567704 LY6G6DO95868 133 aa8.47□□□□□ -1.05
CSPG4P13-202ENST00000567704 SPAG11AQ6PDA7 123 aa8.47□□□□□ -1.05
CSPG4P13-202ENST00000567704 M0R2N4 97 aa8.46□□□□□ -1.05
CSPG4P13-202ENST00000567704 Q8NBF4 154 aa8.46□□□□□ -1.05
CSPG4P13-202ENST00000567704 RETNLBQ9BQ08 111 aa8.46□□□□□ -1.05
CSPG4P13-202ENST00000567704 A8MUN3 132 aa8.46□□□□□ -1.05
CSPG4P13-202ENST00000567704 ANKRD17O75179 2603 aaKnown RBP8.46□□□□□ -1.06
CSPG4P13-202ENST00000567704 F8WDY8 70 aa8.46□□□□□ -1.06
CSPG4P13-202ENST00000567704 LINC00167Q96N53 147 aa8.45□□□□□ -1.06
CSPG4P13-202ENST00000567704 FSHBP01225 129 aa8.45□□□□□ -1.06
CSPG4P13-202ENST00000567704 SMR3AQ99954 134 aa8.45□□□□□ -1.06
CSPG4P13-202ENST00000567704 PCSK5Q92824 1860 aa8.44□□□□□ -1.06
CSPG4P13-202ENST00000567704 IL17DQ8TAD2 202 aa8.43□□□□□ -1.06
CSPG4P13-202ENST00000567704 ERC2-IT1O76042 136 aa8.43□□□□□ -1.06
CSPG4P13-202ENST00000567704 A0A1B0GW54 56 aa8.42□□□□□ -1.06
CSPG4P13-202ENST00000567704 SPINK1P00995 79 aa8.42□□□□□ -1.06
CSPG4P13-202ENST00000567704 CIRBP-AS1Q8TBR5 109 aa8.42□□□□□ -1.06
CSPG4P13-202ENST00000567704 ZNF575Q86XF7 245 aa8.42□□□□□ -1.06
CSPG4P13-202ENST00000567704 ST20-AS1Q8NBB2 130 aa8.42□□□□□ -1.06
CSPG4P13-202ENST00000567704 IGLV6-57P01721 117 aa8.41□□□□□ -1.06
CSPG4P13-202ENST00000567704 TNRC18O15417 2968 aaPredicted RBP8.41□□□□□ -1.06
CSPG4P13-202ENST00000567704 CFAP54Q96N23 3096 aa8.41□□□□□ -1.06
CSPG4P13-202ENST00000567704 LINC00476Q8WZB0 136 aa8.41□□□□□ -1.06
CSPG4P13-202ENST00000567704 C16orf95Q9H693 158 aa8.4□□□□□ -1.06
CSPG4P13-202ENST00000567704 TRBV7-4A0A0J9YYF1 115 aa8.4□□□□□ -1.07
CSPG4P13-202ENST00000567704 RPL37AP61513 92 aaKnown RBP8.39□□□□□ -1.07
CSPG4P13-202ENST00000567704 Q6ZRX8 168 aa8.39□□□□□ -1.07
CSPG4P13-202ENST00000567704 X6R8D5 127 aa8.38□□□□□ -1.07
CSPG4P13-202ENST00000567704 K7EQZ3 153 aa8.38□□□□□ -1.07
CSPG4P13-202ENST00000567704 TRAV22A0A0B4J277 110 aa8.37□□□□□ -1.07
CSPG4P13-202ENST00000567704 VPREB1P12018 145 aa8.37□□□□□ -1.07
CSPG4P13-202ENST00000567704 LINC01556Q5JQF7 62 aa8.37□□□□□ -1.07
CSPG4P13-202ENST00000567704 H3BPC8 53 aa8.36□□□□□ -1.07
CSPG4P13-202ENST00000567704 LINC01600Q96MT4 127 aa8.36□□□□□ -1.07
CSPG4P13-202ENST00000567704 A0A1B0GU69 56 aa8.36□□□□□ -1.07
CSPG4P13-202ENST00000567704 EPG5Q9HCE0 2579 aa8.35□□□□□ -1.07
CSPG4P13-202ENST00000567704 TP53AIP1Q9HCN2 124 aa8.35□□□□□ -1.07
CSPG4P13-202ENST00000567704 LAMA2P24043 3122 aaKnown RBP8.34□□□□□ -1.07
CSPG4P13-202ENST00000567704 PRUNE2Q8WUY3 3088 aa8.34□□□□□ -1.08
CSPG4P13-202ENST00000567704 SERTAD4-AS1Q5TG53 156 aa8.33□□□□□ -1.08
CSPG4P13-202ENST00000567704 GVQW2A0A096LPI5 108 aaPredicted RBP8.33□□□□□ -1.08
CSPG4P13-202ENST00000567704 Q6ZRP5 223 aa8.33□□□□□ -1.08
CSPG4P13-202ENST00000567704 WIPF1O43516 503 aa8.32□□□□□ -1.08
CSPG4P13-202ENST00000567704 LINC00528Q8N1L1 170 aa8.32□□□□□ -1.08
CSPG4P13-202ENST00000567704 CDH23Q9H251 3354 aa8.32□□□□□ -1.08
CSPG4P13-202ENST00000567704 USP24Q9UPU5 2620 aa8.31□□□□□ -1.08
CSPG4P13-202ENST00000567704 ACYP2P14621 99 aa8.31□□□□□ -1.08
CSPG4P13-202ENST00000567704 COA5Q86WW8 74 aa8.3□□□□□ -1.08
CSPG4P13-202ENST00000567704 IGKV2D-30A0A075B6S6 120 aa8.29□□□□□ -1.08
CSPG4P13-202ENST00000567704 IGKV2-30P06310 120 aa8.29□□□□□ -1.08
CSPG4P13-202ENST00000567704 ZNF292O60281 2723 aa8.29□□□□□ -1.08
CSPG4P13-202ENST00000567704 ATP11AUNQ6ZP68 121 aa8.29□□□□□ -1.08
CSPG4P13-202ENST00000567704 CYP4F30PQ9H0H9 118 aa8.29□□□□□ -1.08
CSPG4P13-202ENST00000567704 CD164Q04900 197 aa8.28□□□□□ -1.08
CSPG4P13-202ENST00000567704 OBSCN-AS1Q96MR7 158 aa8.28□□□□□ -1.08
CSPG4P13-202ENST00000567704 CYSTM1Q9H1C7 97 aa8.27□□□□□ -1.09
CSPG4P13-202ENST00000567704 FASNP49327 2511 aaKnown RBP8.26□□□□□ -1.09
CSPG4P13-202ENST00000567704 C8orf87E5RJ46 101 aa8.26□□□□□ -1.09
CSPG4P13-202ENST00000567704 FAM168BA1KXE4 195 aa8.26□□□□□ -1.09
CSPG4P13-202ENST00000567704 MOBPQ13875 183 aa8.25□□□□□ -1.09
CSPG4P13-202ENST00000567704 Q8N377 158 aa8.25□□□□□ -1.09
CSPG4P13-202ENST00000567704 LOC101927531A0A1B0GV80 90 aa8.24□□□□□ -1.09
CSPG4P13-202ENST00000567704 PHF5AQ7RTV0 110 aaKnown RBP8.24□□□□□ -1.09
CSPG4P13-202ENST00000567704 CSNK1G2-AS1Q8NCQ2 148 aa8.24□□□□□ -1.09
CSPG4P13-202ENST00000567704 KCNQ1DNQ9H478 68 aa8.24□□□□□ -1.09
CSPG4P13-202ENST00000567704 IGLV8-61A0A075B6I0 122 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms