RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 Q8NDZ9 215 aa7.63□□□□□ -1.19
RNF40-211ENST00000567365 HERVK_113P61574 105 aa7.62□□□□□ -1.19
RNF40-211ENST00000567365 HIST1H2BLQ99880 126 aa7.62□□□□□ -1.19
RNF40-211ENST00000567365 MYMXA0A1B0GTQ4 84 aa7.61□□□□□ -1.19
RNF40-211ENST00000567365 KRTAP29-1A8MX34 341 aaPredicted RBP7.61□□□□□ -1.19
RNF40-211ENST00000567365 SMIM13P0DJ93 91 aa7.61□□□□□ -1.19
RNF40-211ENST00000567365 VPREB1P12018 145 aa7.61□□□□□ -1.19
RNF40-211ENST00000567365 NMUP48645 174 aa7.61□□□□□ -1.19
RNF40-211ENST00000567365 KRTDAPP60985 99 aa7.61□□□□□ -1.19
RNF40-211ENST00000567365 MRPL55Q7Z7F7 128 aaKnown RBP7.6□□□□□ -1.19
RNF40-211ENST00000567365 LINC00158P58513 81 aa7.59□□□□□ -1.19
RNF40-211ENST00000567365 LBHQ53QV2 105 aaPredicted RBP7.59□□□□□ -1.19
RNF40-211ENST00000567365 LINC00167Q96N53 147 aa7.59□□□□□ -1.19
RNF40-211ENST00000567365 IGKV2D-26A0A0A0MRZ7 120 aa7.58□□□□□ -1.2
RNF40-211ENST00000567365 LOC107984156A0A0G2JMH3 177 aa7.58□□□□□ -1.2
RNF40-211ENST00000567365 A0A0U1RRA0 63 aa7.58□□□□□ -1.2
RNF40-211ENST00000567365 C5orf52A6NGY3 159 aa7.58□□□□□ -1.2
RNF40-211ENST00000567365 LINC00587B1AMM8 73 aa7.58□□□□□ -1.2
RNF40-211ENST00000567365 J3QL48 77 aa7.58□□□□□ -1.2
RNF40-211ENST00000567365 OXTP01178 125 aa7.58□□□□□ -1.2
RNF40-211ENST00000567365 C1orf137Q5JT78 98 aa7.58□□□□□ -1.2
RNF40-211ENST00000567365 ARL17AQ8IVW1 177 aa7.58□□□□□ -1.2
RNF40-211ENST00000567365 MIR7-3HGQ8N6C7 128 aa7.58□□□□□ -1.2
RNF40-211ENST00000567365 IGLV7-43P04211 117 aa7.57□□□□□ -1.2
RNF40-211ENST00000567365 LGALS3P17931 250 aaKnown RBP7.57□□□□□ -1.2
RNF40-211ENST00000567365 SNRPEP62304 92 aaKnown RBP7.57□□□□□ -1.2
RNF40-211ENST00000567365 SPINK6Q6UWN8 80 aa7.57□□□□□ -1.2
RNF40-211ENST00000567365 A0A0J9YXY3 114 aa7.56□□□□□ -1.2
RNF40-211ENST00000567365 UBE2BP63146 152 aa7.56□□□□□ -1.2
RNF40-211ENST00000567365 ANKRD39Q53RE8 183 aa7.56□□□□□ -1.2
RNF40-211ENST00000567365 MEIG1Q5JSS6 88 aa7.56□□□□□ -1.2
RNF40-211ENST00000567365 C20orf202A1L168 122 aa7.55□□□□□ -1.2
RNF40-211ENST00000567365 S100A6P06703 90 aa7.55□□□□□ -1.2
RNF40-211ENST00000567365 MT1HL1P0DM35 61 aa7.55□□□□□ -1.2
RNF40-211ENST00000567365 S100A2P29034 98 aa7.55□□□□□ -1.2
RNF40-211ENST00000567365 RPL24P83731 157 aaKnown RBP7.55□□□□□ -1.2
RNF40-211ENST00000567365 LITAFQ99732 161 aa7.55□□□□□ -1.2
RNF40-211ENST00000567365 IGLV1-50A0A075B6I6 118 aa7.54□□□□□ -1.2
RNF40-211ENST00000567365 ADAMTSL4-AS1Q5T5F5 129 aa7.54□□□□□ -1.2
RNF40-211ENST00000567365 NKAPP1Q8N9T2 125 aa7.54□□□□□ -1.2
RNF40-211ENST00000567365 GAGE10A6NGK3 116 aa7.53□□□□□ -1.2
RNF40-211ENST00000567365 RPL37AP8A6NKH3 93 aa7.53□□□□□ -1.2
RNF40-211ENST00000567365 EIF4EBP3O60516 100 aaPredicted RBP7.53□□□□□ -1.2
RNF40-211ENST00000567365 AKR1D1P51857 326 aa7.53□□□□□ -1.2
RNF40-211ENST00000567365 SOSTDC1Q6X4U4 206 aa7.53□□□□□ -1.2
RNF40-211ENST00000567365 KRTAP13-1Q8IUC0 172 aa7.53□□□□□ -1.2
RNF40-211ENST00000567365 ATOH7Q8N100 152 aa7.53□□□□□ -1.2
RNF40-211ENST00000567365 DAND5Q8N907 189 aa7.53□□□□□ -1.2
RNF40-211ENST00000567365 TTTY13Q9BZ97 58 aa7.53□□□□□ -1.2
RNF40-211ENST00000567365 BOD1L2Q8IYS8 172 aa7.52□□□□□ -1.21
RNF40-211ENST00000567365 ZNF861PO60384 105 aa7.51□□□□□ -1.21
RNF40-211ENST00000567365 BCE1O60756 84 aa7.51□□□□□ -1.21
RNF40-211ENST00000567365 TIMM17BO60830 172 aa7.51□□□□□ -1.21
RNF40-211ENST00000567365 LINC01600Q96MT4 127 aa7.51□□□□□ -1.21
RNF40-211ENST00000567365 ZNF815PA8K554 130 aa7.5□□□□□ -1.21
RNF40-211ENST00000567365 H0Y9J4 135 aa7.5□□□□□ -1.21
RNF40-211ENST00000567365 M0R378 163 aa7.5□□□□□ -1.21
RNF40-211ENST00000567365 DIRC1Q969H9 104 aa7.5□□□□□ -1.21
RNF40-211ENST00000567365 IGKV2-28A0A075B6P5 120 aa7.49□□□□□ -1.21
RNF40-211ENST00000567365 IGKV2D-28P01615 120 aa7.49□□□□□ -1.21
RNF40-211ENST00000567365 KRTAP1-4P0C5Y4 121 aa7.49□□□□□ -1.21
RNF40-211ENST00000567365 TMEM238C9JI98 176 aa7.48□□□□□ -1.21
RNF40-211ENST00000567365 NDUFC2O95298 119 aa7.48□□□□□ -1.21
RNF40-211ENST00000567365 KRTAP10-8P60410 259 aa7.48□□□□□ -1.21
RNF40-211ENST00000567365 REG3GQ6UW15 175 aa7.48□□□□□ -1.21
RNF40-211ENST00000567365 PCP2Q8IVA1 136 aa7.48□□□□□ -1.21
RNF40-211ENST00000567365 TMEM126AQ9H061 195 aa7.48□□□□□ -1.21
RNF40-211ENST00000567365 TRBV10-2A0A0K0K1G8 114 aa7.47□□□□□ -1.21
RNF40-211ENST00000567365 KRTAP4-16G5E9R7 235 aaPredicted RBP7.46□□□□□ -1.22
RNF40-211ENST00000567365 NCR3O14931 201 aa7.46□□□□□ -1.22
RNF40-211ENST00000567365 SPRR1AP35321 89 aa7.46□□□□□ -1.22
RNF40-211ENST00000567365 LINC00308Q8TCZ7 52 aa7.46□□□□□ -1.22
RNF40-211ENST00000567365 KCNQ1DNQ9H478 68 aa7.46□□□□□ -1.22
RNF40-211ENST00000567365 HMCN2Q8NDA2 5059 aa7.45□□□□□ -1.22
RNF40-211ENST00000567365 TRBV10-3A0A0K0K1G6 114 aa7.45□□□□□ -1.22
RNF40-211ENST00000567365 RPL28P46779 137 aaKnown RBP7.45□□□□□ -1.22
RNF40-211ENST00000567365 SPANXDQ9BXN6 97 aa7.45□□□□□ -1.22
RNF40-211ENST00000567365 SPANXB1Q9NS25 103 aaPredicted RBP7.45□□□□□ -1.22
RNF40-211ENST00000567365 SPANXCQ9NY87 97 aa7.45□□□□□ -1.22
RNF40-211ENST00000567365 PRYO14603 147 aa7.44□□□□□ -1.22
RNF40-211ENST00000567365 MIEN1Q9BRT3 115 aa7.44□□□□□ -1.22
RNF40-211ENST00000567365 PPDPFQ9H3Y8 114 aa7.44□□□□□ -1.22
RNF40-211ENST00000567365 IGLV6-57P01721 117 aa7.43□□□□□ -1.22
RNF40-211ENST00000567365 NPC2P61916 151 aa7.43□□□□□ -1.22
RNF40-211ENST00000567365 UBR4Q5T4S7 5183 aa7.43□□□□□ -1.22
RNF40-211ENST00000567365 SCGB1D1O95968 90 aa7.42□□□□□ -1.22
RNF40-211ENST00000567365 PRLHP81277 87 aa7.42□□□□□ -1.22
RNF40-211ENST00000567365 LINC00337Q8N6G1 96 aa7.42□□□□□ -1.22
RNF40-211ENST00000567365 JOSD1Q15040 202 aaPredicted RBP7.41□□□□□ -1.22
RNF40-211ENST00000567365 SCGB1D4Q6XE38 83 aa7.41□□□□□ -1.22
RNF40-211ENST00000567365 Q6ZVH6 145 aa7.41□□□□□ -1.22
RNF40-211ENST00000567365 HSBP1L1C9JCN9 74 aa7.4□□□□□ -1.22
RNF40-211ENST00000567365 DDTP30046 118 aa7.4□□□□□ -1.22
RNF40-211ENST00000567365 UBE2AP49459 152 aa7.4□□□□□ -1.22
RNF40-211ENST00000567365 FAM19A1Q7Z5A9 133 aa7.4□□□□□ -1.22
RNF40-211ENST00000567365 IFITM1P13164 125 aa7.39□□□□□ -1.23
RNF40-211ENST00000567365 PRR26Q8N8Z3 221 aa7.39□□□□□ -1.23
RNF40-211ENST00000567365 B5MCH6 92 aa7.37□□□□□ -1.23
RNF40-211ENST00000567365 DLEU1O43261 78 aa7.37□□□□□ -1.23
RNF40-211ENST00000567365 COX8AP10176 69 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms