RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 SPAG11AQ6PDA7 123 aa8.73□□□□□ -1.01
PALB2-205ENST00000567003 SPRR4Q96PI1 79 aa8.73□□□□□ -1.01
PALB2-205ENST00000567003 MT-ND4LP03901 98 aa8.71□□□□□ -1.02
PALB2-205ENST00000567003 Q8NBF4 154 aa8.71□□□□□ -1.02
PALB2-205ENST00000567003 ZNF625Q96I27 306 aaPredicted RBP8.71□□□□□ -1.02
PALB2-205ENST00000567003 ERG28Q9UKR5 140 aa8.71□□□□□ -1.02
PALB2-205ENST00000567003 C21orf62-AS1Q17RA5 79 aa8.7□□□□□ -1.02
PALB2-205ENST00000567003 IGLV5-39A0A0G2JS06 123 aa8.69□□□□□ -1.02
PALB2-205ENST00000567003 H3BRM9 83 aa8.69□□□□□ -1.02
PALB2-205ENST00000567003 RPL24P83731 157 aaKnown RBP8.69□□□□□ -1.02
PALB2-205ENST00000567003 PMVKQ15126 192 aa8.69□□□□□ -1.02
PALB2-205ENST00000567003 GNB1LQ9BYB4 327 aa8.69□□□□□ -1.02
PALB2-205ENST00000567003 A0A1B0GVG6 124 aa8.67□□□□□ -1.02
PALB2-205ENST00000567003 SEC61BP60468 96 aaKnown RBP8.67□□□□□ -1.02
PALB2-205ENST00000567003 IGLC3P0DOY3 106 aa8.66□□□□□ -1.02
PALB2-205ENST00000567003 ZNF22P17026 224 aaPredicted RBP8.66□□□□□ -1.02
PALB2-205ENST00000567003 LINC01546A6NGU7 62 aa8.64□□□□□ -1.03
PALB2-205ENST00000567003 NDUFA6P56556 154 aa8.64□□□□□ -1.03
PALB2-205ENST00000567003 ZNF706Q9Y5V0 76 aaPredicted RBP8.63□□□□□ -1.03
PALB2-205ENST00000567003 A0A0U1RRA0 63 aa8.62□□□□□ -1.03
PALB2-205ENST00000567003 COX17Q14061 63 aa8.62□□□□□ -1.03
PALB2-205ENST00000567003 SMCR5Q8TEV8 140 aa8.62□□□□□ -1.03
PALB2-205ENST00000567003 SPINK1P00995 79 aa8.61□□□□□ -1.03
PALB2-205ENST00000567003 FA2HQ7L5A8 372 aa8.61□□□□□ -1.03
PALB2-205ENST00000567003 LINC01549A6NIU2 74 aa8.6□□□□□ -1.03
PALB2-205ENST00000567003 LINC00158P58513 81 aa8.6□□□□□ -1.03
PALB2-205ENST00000567003 C11orf86A6NJI1 115 aa8.59□□□□□ -1.03
PALB2-205ENST00000567003 NCR3O14931 201 aa8.59□□□□□ -1.03
PALB2-205ENST00000567003 Q8N377 158 aa8.59□□□□□ -1.03
PALB2-205ENST00000567003 SMCO4Q9NRQ5 59 aa8.59□□□□□ -1.03
PALB2-205ENST00000567003 A0A096LNJ9 63 aa8.58□□□□□ -1.04
PALB2-205ENST00000567003 IGLV9-49A0A0B4J1Y8 123 aa8.58□□□□□ -1.04
PALB2-205ENST00000567003 PRYO14603 147 aa8.58□□□□□ -1.04
PALB2-205ENST00000567003 MOBPQ13875 183 aa8.58□□□□□ -1.04
PALB2-205ENST00000567003 KRTAP19-2Q3LHN2 52 aa8.57□□□□□ -1.04
PALB2-205ENST00000567003 LINC00483Q53H64 154 aa8.57□□□□□ -1.04
PALB2-205ENST00000567003 XP32Q5T750 250 aa8.57□□□□□ -1.04
PALB2-205ENST00000567003 GAGE2AQ6NT46 116 aa8.57□□□□□ -1.04
PALB2-205ENST00000567003 NDUFA12Q9UI09 145 aa8.57□□□□□ -1.04
PALB2-205ENST00000567003 SPRR1AP35321 89 aa8.56□□□□□ -1.04
PALB2-205ENST00000567003 TMEM170BQ5T4T1 132 aa8.56□□□□□ -1.04
PALB2-205ENST00000567003 ETDCA0A1B0GVM5 59 aa8.55□□□□□ -1.04
PALB2-205ENST00000567003 KRTAP4-16G5E9R7 235 aaPredicted RBP8.55□□□□□ -1.04
PALB2-205ENST00000567003 MT1HP80294 61 aa8.55□□□□□ -1.04
PALB2-205ENST00000567003 PMCHL1Q16048 86 aa8.55□□□□□ -1.04
PALB2-205ENST00000567003 BOD1L2Q8IYS8 172 aa8.55□□□□□ -1.04
PALB2-205ENST00000567003 ERC2-IT1O76042 136 aa8.54□□□□□ -1.04
PALB2-205ENST00000567003 SMIM13P0DJ93 91 aa8.54□□□□□ -1.04
PALB2-205ENST00000567003 URB1-AS1Q96HZ7 61 aa8.54□□□□□ -1.04
PALB2-205ENST00000567003 TRAV9-1A0A075B6T8 112 aa8.53□□□□□ -1.04
PALB2-205ENST00000567003 FABP9Q0Z7S8 132 aa8.53□□□□□ -1.04
PALB2-205ENST00000567003 KCNQ1DNQ9H478 68 aa8.53□□□□□ -1.04
PALB2-205ENST00000567003 TRBV10-3A0A0K0K1G6 114 aa8.52□□□□□ -1.05
PALB2-205ENST00000567003 BAGE3Q86Y29 109 aa8.52□□□□□ -1.05
PALB2-205ENST00000567003 FAM19A2Q8N3H0 131 aa8.52□□□□□ -1.05
PALB2-205ENST00000567003 SLC25A20O43772 301 aa8.51□□□□□ -1.05
PALB2-205ENST00000567003 SFTA2Q6UW10 78 aa8.51□□□□□ -1.05
PALB2-205ENST00000567003 HBDP02042 147 aa8.5□□□□□ -1.05
PALB2-205ENST00000567003 RPS29P62273 56 aaKnown RBP8.5□□□□□ -1.05
PALB2-205ENST00000567003 MIR7-3HGQ8N6C7 128 aa8.5□□□□□ -1.05
PALB2-205ENST00000567003 B5MCH6 92 aa8.49□□□□□ -1.05
PALB2-205ENST00000567003 FLGP20930 4061 aaPredicted RBP8.48□□□□□ -1.05
PALB2-205ENST00000567003 TMEM223A0PJW6 202 aa8.48□□□□□ -1.05
PALB2-205ENST00000567003 ATP6V1G1O75348 118 aa8.48□□□□□ -1.05
PALB2-205ENST00000567003 S100PP25815 95 aa8.48□□□□□ -1.05
PALB2-205ENST00000567003 PCOTHQ58A44 107 aa8.48□□□□□ -1.05
PALB2-205ENST00000567003 MEIG1Q5JSS6 88 aa8.48□□□□□ -1.05
PALB2-205ENST00000567003 SSBP3-AS1Q7Z2R9 100 aa8.48□□□□□ -1.05
PALB2-205ENST00000567003 Q9BRP9 147 aa8.48□□□□□ -1.05
PALB2-205ENST00000567003 C18orf32Q8TCD1 76 aa8.47□□□□□ -1.05
PALB2-205ENST00000567003 CHTOPQ9Y3Y2 248 aaKnown RBP8.47□□□□□ -1.05
PALB2-205ENST00000567003 LINC00614P0C842 121 aa8.46□□□□□ -1.06
PALB2-205ENST00000567003 IGLV8-61A0A075B6I0 122 aa8.45□□□□□ -1.06
PALB2-205ENST00000567003 C9orf153Q5TBE3 101 aa8.45□□□□□ -1.06
PALB2-205ENST00000567003 TMEM218A2RU14 115 aa8.44□□□□□ -1.06
PALB2-205ENST00000567003 CFC1BP0CG36 223 aa8.44□□□□□ -1.06
PALB2-205ENST00000567003 KRTAP10-6P60371 365 aaPredicted RBP8.44□□□□□ -1.06
PALB2-205ENST00000567003 COX19Q49B96 90 aa8.44□□□□□ -1.06
PALB2-205ENST00000567003 SEC11CQ9BY50 192 aa8.44□□□□□ -1.06
PALB2-205ENST00000567003 C9orf92A6NGG3 77 aa8.43□□□□□ -1.06
PALB2-205ENST00000567003 LOC100996750A0A140TA64 210 aa8.42□□□□□ -1.06
PALB2-205ENST00000567003 DDTP30046 118 aa8.42□□□□□ -1.06
PALB2-205ENST00000567003 KRTAP4-6Q9BYQ5 205 aa8.42□□□□□ -1.06
PALB2-205ENST00000567003 Q6ZRX8 168 aa8.41□□□□□ -1.06
PALB2-205ENST00000567003 S100A12P80511 92 aa8.4□□□□□ -1.06
PALB2-205ENST00000567003 CLLU1Q5K131 121 aa8.4□□□□□ -1.06
PALB2-205ENST00000567003 ST20-AS1Q8NBB2 130 aa8.4□□□□□ -1.06
PALB2-205ENST00000567003 HERV-K104P63124 156 aa8.39□□□□□ -1.07
PALB2-205ENST00000567003 TRAPPC1Q9Y5R8 145 aa8.39□□□□□ -1.07
PALB2-205ENST00000567003 TSPEAR-AS2P59090 65 aa8.38□□□□□ -1.07
PALB2-205ENST00000567003 HRCT1Q6UXD1 115 aa8.38□□□□□ -1.07
PALB2-205ENST00000567003 UQCC3Q6UW78 93 aa8.37□□□□□ -1.07
PALB2-205ENST00000567003 TRAV12-1A0A0B4J245 112 aa8.36□□□□□ -1.07
PALB2-205ENST00000567003 IFI27L1Q96BM0 104 aa8.36□□□□□ -1.07
PALB2-205ENST00000567003 RPS10P5Q9NQ39 176 aa8.36□□□□□ -1.07
PALB2-205ENST00000567003 MYMXA0A1B0GTQ4 84 aa8.35□□□□□ -1.07
PALB2-205ENST00000567003 MAP1LC3CQ9BXW4 147 aa8.35□□□□□ -1.07
PALB2-205ENST00000567003 TRBV10-2A0A0K0K1G8 114 aa8.34□□□□□ -1.07
PALB2-205ENST00000567003 M0R2T5 61 aa8.34□□□□□ -1.07
PALB2-205ENST00000567003 TRAV23DV6A0A075B6W5 121 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms