RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 LINC00304Q8N9R0 145 aa8.86□□□□□ -0.99
SMPD3-208ENST00000566723 CHTOPQ9Y3Y2 248 aaKnown RBP8.86□□□□□ -0.99
SMPD3-208ENST00000566723 IGKV2D-26A0A0A0MRZ7 120 aa8.85□□□□□ -0.99
SMPD3-208ENST00000566723 SNAPINO95295 136 aa8.84□□□□□ -0.99
SMPD3-208ENST00000566723 NDUFA5Q16718 116 aa8.84□□□□□ -0.99
SMPD3-208ENST00000566723 SVBPQ8N300 66 aa8.84□□□□□ -0.99
SMPD3-208ENST00000566723 TRAV12-1A0A0B4J245 112 aa8.83□□□□□ -1
SMPD3-208ENST00000566723 TMEM223A0PJW6 202 aa8.83□□□□□ -1
SMPD3-208ENST00000566723 LINC00158P58513 81 aa8.83□□□□□ -1
SMPD3-208ENST00000566723 CBLN2Q8IUK8 224 aa8.82□□□□□ -1
SMPD3-208ENST00000566723 CHCHD1Q96BP2 118 aaKnown RBP8.82□□□□□ -1
SMPD3-208ENST00000566723 PLEKHB2Q96CS7 222 aa8.82□□□□□ -1
SMPD3-208ENST00000566723 RETNLBQ9BQ08 111 aa8.82□□□□□ -1
SMPD3-208ENST00000566723 IFI27L1Q96BM0 104 aa8.81□□□□□ -1
SMPD3-208ENST00000566723 A0A0U1RRA0 63 aa8.8□□□□□ -1
SMPD3-208ENST00000566723 CTAG1AP78358 180 aa8.8□□□□□ -1
SMPD3-208ENST00000566723 YPEL4Q96NS1 127 aa8.8□□□□□ -1
SMPD3-208ENST00000566723 HIGD2AQ9BW72 106 aa8.8□□□□□ -1
SMPD3-208ENST00000566723 MUC17Q685J3 4493 aa8.79□□□□□ -1
SMPD3-208ENST00000566723 A0A0U1RQV1 116 aa8.79□□□□□ -1
SMPD3-208ENST00000566723 MEIG1Q5JSS6 88 aa8.78□□□□□ -1
SMPD3-208ENST00000566723 C3orf22Q8N5N4 141 aa8.78□□□□□ -1
SMPD3-208ENST00000566723 PRYO14603 147 aa8.77□□□□□ -1.01
SMPD3-208ENST00000566723 ATP6V1G1O75348 118 aa8.77□□□□□ -1.01
SMPD3-208ENST00000566723 SMIM13P0DJ93 91 aa8.77□□□□□ -1.01
SMPD3-208ENST00000566723 SPRR4Q96PI1 79 aa8.77□□□□□ -1.01
SMPD3-208ENST00000566723 HERV-K104P63124 156 aa8.76□□□□□ -1.01
SMPD3-208ENST00000566723 TPRXLQ17RH7 258 aa8.76□□□□□ -1.01
SMPD3-208ENST00000566723 BOD1L2Q8IYS8 172 aa8.76□□□□□ -1.01
SMPD3-208ENST00000566723 MIR7-3HGQ8N6C7 128 aa8.76□□□□□ -1.01
SMPD3-208ENST00000566723 FAT4Q6V0I7 4981 aa8.76□□□□□ -1.01
SMPD3-208ENST00000566723 NCR3O14931 201 aa8.75□□□□□ -1.01
SMPD3-208ENST00000566723 HSBP1O75506 76 aa8.75□□□□□ -1.01
SMPD3-208ENST00000566723 ZNF706Q9Y5V0 76 aaPredicted RBP8.75□□□□□ -1.01
SMPD3-208ENST00000566723 FAM19A2Q8N3H0 131 aa8.74□□□□□ -1.01
SMPD3-208ENST00000566723 NDUFA12Q9UI09 145 aa8.74□□□□□ -1.01
SMPD3-208ENST00000566723 IGLV7-46A0A075B6I9 117 aa8.73□□□□□ -1.01
SMPD3-208ENST00000566723 LINC00587B1AMM8 73 aa8.73□□□□□ -1.01
SMPD3-208ENST00000566723 SPRR1AP35321 89 aa8.73□□□□□ -1.01
SMPD3-208ENST00000566723 LINC00337Q8N6G1 96 aa8.73□□□□□ -1.01
SMPD3-208ENST00000566723 MYMXA0A1B0GTQ4 84 aa8.72□□□□□ -1.01
SMPD3-208ENST00000566723 SPAG11AQ6PDA7 123 aa8.72□□□□□ -1.01
SMPD3-208ENST00000566723 CDIP1Q9H305 208 aa8.72□□□□□ -1.01
SMPD3-208ENST00000566723 KCNQ1DNQ9H478 68 aa8.72□□□□□ -1.01
SMPD3-208ENST00000566723 KRTAP4-16G5E9R7 235 aaPredicted RBP8.71□□□□□ -1.02
SMPD3-208ENST00000566723 H0Y8G0 127 aa8.71□□□□□ -1.02
SMPD3-208ENST00000566723 MAP1LC3CQ9BXW4 147 aa8.71□□□□□ -1.02
SMPD3-208ENST00000566723 TRBV10-3A0A0K0K1G6 114 aa8.7□□□□□ -1.02
SMPD3-208ENST00000566723 ETDCA0A1B0GVM5 59 aa8.7□□□□□ -1.02
SMPD3-208ENST00000566723 TSPEAR-AS2P59090 65 aa8.7□□□□□ -1.02
SMPD3-208ENST00000566723 LCE2DQ5TA82 110 aaPredicted RBP8.69□□□□□ -1.02
SMPD3-208ENST00000566723 LEPROTL1O95214 131 aa8.68□□□□□ -1.02
SMPD3-208ENST00000566723 SMCR5Q8TEV8 140 aa8.68□□□□□ -1.02
SMPD3-208ENST00000566723 PPDPFQ9H3Y8 114 aa8.68□□□□□ -1.02
SMPD3-208ENST00000566723 LEPROTO15243 131 aa8.67□□□□□ -1.02
SMPD3-208ENST00000566723 SERF1AO75920 110 aa8.67□□□□□ -1.02
SMPD3-208ENST00000566723 TRGC2P03986 189 aa8.67□□□□□ -1.02
SMPD3-208ENST00000566723 PLNP26678 52 aa8.67□□□□□ -1.02
SMPD3-208ENST00000566723 LINC00310P59036 64 aa8.67□□□□□ -1.02
SMPD3-208ENST00000566723 S100A12P80511 92 aa8.67□□□□□ -1.02
SMPD3-208ENST00000566723 C4orf48Q5BLP8 95 aa8.67□□□□□ -1.02
SMPD3-208ENST00000566723 Q8NBF4 154 aa8.67□□□□□ -1.02
SMPD3-208ENST00000566723 LOC107984156A0A0G2JMH3 177 aa8.66□□□□□ -1.02
SMPD3-208ENST00000566723 LINC00483Q53H64 154 aa8.66□□□□□ -1.02
SMPD3-208ENST00000566723 FP248Q71RG6 208 aaPredicted RBP8.66□□□□□ -1.02
SMPD3-208ENST00000566723 ARL17AQ8IVW1 177 aa8.66□□□□□ -1.02
SMPD3-208ENST00000566723 DAND5Q8N907 189 aa8.66□□□□□ -1.02
SMPD3-208ENST00000566723 TRBV10-2A0A0K0K1G8 114 aa8.65□□□□□ -1.02
SMPD3-208ENST00000566723 B5MCH6 92 aa8.64□□□□□ -1.03
SMPD3-208ENST00000566723 J3QQQ9 107 aa8.64□□□□□ -1.03
SMPD3-208ENST00000566723 DDTP30046 118 aa8.64□□□□□ -1.03
SMPD3-208ENST00000566723 HERVK_113P61574 105 aa8.64□□□□□ -1.03
SMPD3-208ENST00000566723 HSPB8Q9UJY1 196 aa8.64□□□□□ -1.03
SMPD3-208ENST00000566723 DPM2O94777 84 aa8.63□□□□□ -1.03
SMPD3-208ENST00000566723 NMUP48645 174 aa8.63□□□□□ -1.03
SMPD3-208ENST00000566723 LCE2AQ5TA79 106 aaPredicted RBP8.63□□□□□ -1.03
SMPD3-208ENST00000566723 SPANXB1Q9NS25 103 aaPredicted RBP8.63□□□□□ -1.03
SMPD3-208ENST00000566723 SPINK1P00995 79 aa8.62□□□□□ -1.03
SMPD3-208ENST00000566723 LGALS3P17931 250 aaKnown RBP8.62□□□□□ -1.03
SMPD3-208ENST00000566723 GAGE2AQ6NT46 116 aa8.62□□□□□ -1.03
SMPD3-208ENST00000566723 MIEN1Q9BRT3 115 aa8.62□□□□□ -1.03
SMPD3-208ENST00000566723 IGKCP01834 107 aa8.61□□□□□ -1.03
SMPD3-208ENST00000566723 FABP4P15090 132 aa8.61□□□□□ -1.03
SMPD3-208ENST00000566723 Q6ZRX8 168 aa8.61□□□□□ -1.03
SMPD3-208ENST00000566723 PMCHL2Q9BQD1 86 aa8.61□□□□□ -1.03
SMPD3-208ENST00000566723 ERC2-IT1O76042 136 aa8.6□□□□□ -1.03
SMPD3-208ENST00000566723 NDUFC2O95298 119 aa8.6□□□□□ -1.03
SMPD3-208ENST00000566723 MOBPQ13875 183 aa8.6□□□□□ -1.03
SMPD3-208ENST00000566723 Q9BRP9 147 aa8.6□□□□□ -1.03
SMPD3-208ENST00000566723 IGLV6-57P01721 117 aa8.59□□□□□ -1.03
SMPD3-208ENST00000566723 IGLV9-49A0A0B4J1Y8 123 aa8.58□□□□□ -1.04
SMPD3-208ENST00000566723 KRTAP13-3Q3SY46 172 aa8.58□□□□□ -1.04
SMPD3-208ENST00000566723 S100A7L2Q5SY68 101 aa8.58□□□□□ -1.04
SMPD3-208ENST00000566723 RPS29P62273 56 aaKnown RBP8.57□□□□□ -1.04
SMPD3-208ENST00000566723 TRAV23DV6A0A075B6W5 121 aa8.56□□□□□ -1.04
SMPD3-208ENST00000566723 SOSTDC1Q6X4U4 206 aa8.56□□□□□ -1.04
SMPD3-208ENST00000566723 SSBP3-AS1Q7Z2R9 100 aa8.56□□□□□ -1.04
SMPD3-208ENST00000566723 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
SMPD3-208ENST00000566723 KRTAP3-2Q9BYR7 98 aa8.56□□□□□ -1.04
SMPD3-208ENST00000566723 A0A0J9YXY3 114 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 213.1 ms