RNA–Protein interactions for RNA: ENST00000566371.5

SPG7-214, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-214ENST00000566371 HERV-K104P63124 156 aa12.99□□□□□ -0.33
SPG7-214ENST00000566371 PRR26Q8N8Z3 221 aa12.99□□□□□ -0.33
SPG7-214ENST00000566371 IGKV2-28A0A075B6P5 120 aa12.96□□□□□ -0.33
SPG7-214ENST00000566371 LINC00587B1AMM8 73 aa12.96□□□□□ -0.33
SPG7-214ENST00000566371 HIST1H2BKO60814 126 aa12.96□□□□□ -0.33
SPG7-214ENST00000566371 DPM2O94777 84 aa12.96□□□□□ -0.33
SPG7-214ENST00000566371 IGKV2D-28P01615 120 aa12.96□□□□□ -0.33
SPG7-214ENST00000566371 HIST1H2BJP06899 126 aa12.96□□□□□ -0.33
SPG7-214ENST00000566371 HIST1H2BOP23527 126 aa12.96□□□□□ -0.33
SPG7-214ENST00000566371 HIST1H2BBP33778 126 aa12.96□□□□□ -0.33
SPG7-214ENST00000566371 HIST1H2BDP58876 126 aa12.96□□□□□ -0.33
SPG7-214ENST00000566371 HIST1H2BCP62807 126 aa12.96□□□□□ -0.33
SPG7-214ENST00000566371 HIST2H2BEQ16778 126 aa12.96□□□□□ -0.33
SPG7-214ENST00000566371 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.96□□□□□ -0.33
SPG7-214ENST00000566371 HIST1H2BHQ93079 126 aa12.96□□□□□ -0.33
SPG7-214ENST00000566371 HIST1H2BNQ99877 126 aa12.96□□□□□ -0.33
SPG7-214ENST00000566371 HIST1H2BMQ99879 126 aa12.96□□□□□ -0.33
SPG7-214ENST00000566371 NDUFA12Q9UI09 145 aa12.96□□□□□ -0.33
SPG7-214ENST00000566371 MYMXA0A1B0GTQ4 84 aa12.95□□□□□ -0.34
SPG7-214ENST00000566371 Q8NDZ9 215 aa12.95□□□□□ -0.34
SPG7-214ENST00000566371 MAP1LC3CQ9BXW4 147 aa12.95□□□□□ -0.34
SPG7-214ENST00000566371 SMIM13P0DJ93 91 aa12.94□□□□□ -0.34
SPG7-214ENST00000566371 RPL13AP40429 203 aaKnown RBP12.94□□□□□ -0.34
SPG7-214ENST00000566371 MEIG1Q5JSS6 88 aa12.94□□□□□ -0.34
SPG7-214ENST00000566371 KRTAP13-1Q8IUC0 172 aa12.94□□□□□ -0.34
SPG7-214ENST00000566371 PLEKHB2Q96CS7 222 aa12.94□□□□□ -0.34
SPG7-214ENST00000566371 A0A0U1RRA0 63 aa12.93□□□□□ -0.34
SPG7-214ENST00000566371 LEPROTO15243 131 aa12.93□□□□□ -0.34
SPG7-214ENST00000566371 IGKCP01834 107 aa12.93□□□□□ -0.34
SPG7-214ENST00000566371 HERVK_113P61574 105 aa12.92□□□□□ -0.34
SPG7-214ENST00000566371 UBE2AP49459 152 aa12.91□□□□□ -0.34
SPG7-214ENST00000566371 TSPEAR-AS2P59090 65 aa12.91□□□□□ -0.34
SPG7-214ENST00000566371 PMCHL2Q9BQD1 86 aa12.91□□□□□ -0.34
SPG7-214ENST00000566371 MIR7-3HGQ8N6C7 128 aa12.9□□□□□ -0.34
SPG7-214ENST00000566371 TMEM126AQ9H061 195 aa12.9□□□□□ -0.34
SPG7-214ENST00000566371 J3QQQ9 107 aa12.89□□□□□ -0.35
SPG7-214ENST00000566371 NMUP48645 174 aa12.89□□□□□ -0.35
SPG7-214ENST00000566371 TMEM238C9JI98 176 aa12.88□□□□□ -0.35
SPG7-214ENST00000566371 M0R378 163 aa12.87□□□□□ -0.35
SPG7-214ENST00000566371 BOD1L2Q8IYS8 172 aa12.87□□□□□ -0.35
SPG7-214ENST00000566371 SYS1-DBNDD2H3BUS1 97 aa12.86□□□□□ -0.35
SPG7-214ENST00000566371 IGKV2D-26A0A0A0MRZ7 120 aa12.85□□□□□ -0.35
SPG7-214ENST00000566371 LGALS3P17931 250 aaKnown RBP12.85□□□□□ -0.35
SPG7-214ENST00000566371 UBR4Q5T4S7 5183 aa12.84□□□□□ -0.35
SPG7-214ENST00000566371 FAM19A1Q7Z5A9 133 aa12.84□□□□□ -0.35
SPG7-214ENST00000566371 LOC107984156A0A0G2JMH3 177 aa12.83□□□□□ -0.36
SPG7-214ENST00000566371 PRLHP81277 87 aa12.83□□□□□ -0.36
SPG7-214ENST00000566371 ARL17AQ8IVW1 177 aa12.83□□□□□ -0.36
SPG7-214ENST00000566371 COA6Q5JTJ3 125 aaKnown RBP12.82□□□□□ -0.36
SPG7-214ENST00000566371 E9PLD3 99 aa12.81□□□□□ -0.36
SPG7-214ENST00000566371 CRYGAP11844 174 aa12.81□□□□□ -0.36
SPG7-214ENST00000566371 LINC01545Q5VT33 79 aa12.81□□□□□ -0.36
SPG7-214ENST00000566371 A0A087X002 238 aa12.8□□□□□ -0.36
SPG7-214ENST00000566371 PET117Q6UWS5 81 aa12.8□□□□□ -0.36
SPG7-214ENST00000566371 PRYO14603 147 aa12.79□□□□□ -0.36
SPG7-214ENST00000566371 NCR3O14931 201 aa12.79□□□□□ -0.36
SPG7-214ENST00000566371 FAM229BQ4G0N7 80 aa12.79□□□□□ -0.36
SPG7-214ENST00000566371 DAND5Q8N907 189 aa12.79□□□□□ -0.36
SPG7-214ENST00000566371 LRP2P98164 4655 aa12.78□□□□□ -0.36
SPG7-214ENST00000566371 KCNQ1DNQ9H478 68 aa12.77□□□□□ -0.37
SPG7-214ENST00000566371 TRBV10-2A0A0K0K1G8 114 aa12.75□□□□□ -0.37
SPG7-214ENST00000566371 MIEN1Q9BRT3 115 aa12.75□□□□□ -0.37
SPG7-214ENST00000566371 A0A0J9YXY3 114 aa12.74□□□□□ -0.37
SPG7-214ENST00000566371 TRBV10-3A0A0K0K1G6 114 aa12.74□□□□□ -0.37
SPG7-214ENST00000566371 C3orf79P0CE67 100 aa12.74□□□□□ -0.37
SPG7-214ENST00000566371 SPRR1AP35321 89 aa12.74□□□□□ -0.37
SPG7-214ENST00000566371 LINC00337Q8N6G1 96 aa12.74□□□□□ -0.37
SPG7-214ENST00000566371 TYMSOSQ8TAI1 123 aa12.74□□□□□ -0.37
SPG7-214ENST00000566371 ANAPC11Q9NYG5 84 aa12.74□□□□□ -0.37
SPG7-214ENST00000566371 NDUFC2O95298 119 aa12.72□□□□□ -0.37
SPG7-214ENST00000566371 S100A12P80511 92 aa12.72□□□□□ -0.37
SPG7-214ENST00000566371 HIGD2AQ9BW72 106 aa12.72□□□□□ -0.37
SPG7-214ENST00000566371 SPANXB1Q9NS25 103 aaPredicted RBP12.72□□□□□ -0.37
SPG7-214ENST00000566371 KRTAP4-16G5E9R7 235 aaPredicted RBP12.71□□□□□ -0.37
SPG7-214ENST00000566371 KRTAP13-2Q52LG2 175 aa12.71□□□□□ -0.37
SPG7-214ENST00000566371 KRTDAPP60985 99 aa12.7□□□□□ -0.38
SPG7-214ENST00000566371 ADAMTSL4-AS1Q5T5F5 129 aa12.7□□□□□ -0.38
SPG7-214ENST00000566371 DDTP30046 118 aa12.68□□□□□ -0.38
SPG7-214ENST00000566371 ETDCA0A1B0GVM5 59 aa12.67□□□□□ -0.38
SPG7-214ENST00000566371 TIMM17BO60830 172 aa12.67□□□□□ -0.38
SPG7-214ENST00000566371 SOSTDC1Q6X4U4 206 aa12.67□□□□□ -0.38
SPG7-214ENST00000566371 C20orf202A1L168 122 aa12.66□□□□□ -0.38
SPG7-214ENST00000566371 LITAFQ99732 161 aa12.66□□□□□ -0.38
SPG7-214ENST00000566371 ZNF706Q9Y5V0 76 aaPredicted RBP12.66□□□□□ -0.38
SPG7-214ENST00000566371 IGLV6-57P01721 117 aa12.65□□□□□ -0.38
SPG7-214ENST00000566371 SPRR4Q96PI1 79 aa12.65□□□□□ -0.38
SPG7-214ENST00000566371 ZNF815PA8K554 130 aa12.64□□□□□ -0.39
SPG7-214ENST00000566371 EIF4EBP3O60516 100 aaPredicted RBP12.64□□□□□ -0.39
SPG7-214ENST00000566371 S100A7L2Q5SY68 101 aa12.64□□□□□ -0.39
SPG7-214ENST00000566371 NPC2P61916 151 aa12.63□□□□□ -0.39
SPG7-214ENST00000566371 B5MCH6 92 aa12.62□□□□□ -0.39
SPG7-214ENST00000566371 TSPAN13O95857 204 aa12.62□□□□□ -0.39
SPG7-214ENST00000566371 AKR1D1P51857 326 aa12.62□□□□□ -0.39
SPG7-214ENST00000566371 LINC00304Q8N9R0 145 aa12.61□□□□□ -0.39
SPG7-214ENST00000566371 LINC00308Q8TCZ7 52 aa12.61□□□□□ -0.39
SPG7-214ENST00000566371 SMCR5Q8TEV8 140 aa12.61□□□□□ -0.39
SPG7-214ENST00000566371 SPANXCQ9NY87 97 aa12.6□□□□□ -0.39
SPG7-214ENST00000566371 TTTY13Q9BZ97 58 aa12.59□□□□□ -0.39
SPG7-214ENST00000566371 TRAV23DV6A0A075B6W5 121 aa12.58□□□□□ -0.4
SPG7-214ENST00000566371 CTAG1AP78358 180 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms