RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 RNASE13Q5GAN3 156 aaKnown RBP8.35□□□□□ -1.07
SF3B3-206ENST00000565990 Q6Q795 121 aa8.35□□□□□ -1.07
SF3B3-206ENST00000565990 LINC01561Q8N1V8 128 aa8.35□□□□□ -1.07
SF3B3-206ENST00000565990 LINC00308Q8TCZ7 52 aa8.35□□□□□ -1.07
SF3B3-206ENST00000565990 CHCHD10Q8WYQ3 142 aaPredicted RBP8.35□□□□□ -1.07
SF3B3-206ENST00000565990 ZNF625Q96I27 306 aaPredicted RBP8.35□□□□□ -1.07
SF3B3-206ENST00000565990 FAT2Q9NYQ8 4349 aa8.34□□□□□ -1.07
SF3B3-206ENST00000565990 IGLV10-54A0A075B6I4 117 aa8.34□□□□□ -1.07
SF3B3-206ENST00000565990 IGKV3OR2-268A0A0C4DH90 116 aa8.34□□□□□ -1.07
SF3B3-206ENST00000565990 TNP2Q05952 138 aa8.34□□□□□ -1.07
SF3B3-206ENST00000565990 CD164L2Q6UWJ8 174 aa8.34□□□□□ -1.07
SF3B3-206ENST00000565990 PKD1P98161 4303 aa8.34□□□□□ -1.07
SF3B3-206ENST00000565990 TRAV13-1A0A0B4J241 112 aa8.32□□□□□ -1.08
SF3B3-206ENST00000565990 IGHV3OR16-9A0A0B4J2B5 98 aa8.32□□□□□ -1.08
SF3B3-206ENST00000565990 COX7A2LO14548 114 aa8.32□□□□□ -1.08
SF3B3-206ENST00000565990 PSCAO43653 123 aa8.32□□□□□ -1.08
SF3B3-206ENST00000565990 TRACP01848 142 aa8.32□□□□□ -1.08
SF3B3-206ENST00000565990 COX6A2Q02221 97 aa8.32□□□□□ -1.08
SF3B3-206ENST00000565990 C2orf82Q6UX34 121 aa8.32□□□□□ -1.08
SF3B3-206ENST00000565990 A0A087WTM6 91 aa8.31□□□□□ -1.08
SF3B3-206ENST00000565990 TRAV13-2A0A0B4J235 113 aa8.31□□□□□ -1.08
SF3B3-206ENST00000565990 H7C2G1 150 aa8.31□□□□□ -1.08
SF3B3-206ENST00000565990 ACYP1P07311 99 aa8.31□□□□□ -1.08
SF3B3-206ENST00000565990 NTN5Q8WTR8 489 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-206ENST00000565990 DNAH11Q96DT5 4516 aa8.31□□□□□ -1.08
SF3B3-206ENST00000565990 XCL1P47992 114 aa8.3□□□□□ -1.08
SF3B3-206ENST00000565990 A0A1B0GVY2 172 aa8.29□□□□□ -1.08
SF3B3-206ENST00000565990 XGP55808 180 aa8.29□□□□□ -1.08
SF3B3-206ENST00000565990 MEIG1Q5JSS6 88 aa8.29□□□□□ -1.08
SF3B3-206ENST00000565990 CKS1BP61024 79 aa8.28□□□□□ -1.08
SF3B3-206ENST00000565990 COX7B2Q8TF08 81 aa8.28□□□□□ -1.08
SF3B3-206ENST00000565990 A0A087WZ39 114 aa8.27□□□□□ -1.09
SF3B3-206ENST00000565990 USP17L23D6RBM5 183 aa8.27□□□□□ -1.09
SF3B3-206ENST00000565990 RPL28P46779 137 aaKnown RBP8.27□□□□□ -1.09
SF3B3-206ENST00000565990 CFAP161Q6P656 301 aa8.27□□□□□ -1.09
SF3B3-206ENST00000565990 Q8N814 137 aa8.27□□□□□ -1.09
SF3B3-206ENST00000565990 SNCGO76070 127 aa8.26□□□□□ -1.09
SF3B3-206ENST00000565990 MT-ATP8P03928 68 aa8.26□□□□□ -1.09
SF3B3-206ENST00000565990 C15orf56Q8N910 161 aa8.26□□□□□ -1.09
SF3B3-206ENST00000565990 EPPK1P58107 5090 aaKnown RBP8.25□□□□□ -1.09
SF3B3-206ENST00000565990 C14orf177Q52M58 125 aa8.25□□□□□ -1.09
SF3B3-206ENST00000565990 C5orf38Q86SI9 138 aa8.25□□□□□ -1.09
SF3B3-206ENST00000565990 H0YGX0 51 aa8.24□□□□□ -1.09
SF3B3-206ENST00000565990 LECT2O14960 151 aa8.24□□□□□ -1.09
SF3B3-206ENST00000565990 SOSTDC1Q6X4U4 206 aa8.24□□□□□ -1.09
SF3B3-206ENST00000565990 IMUPQ9GZP8 106 aa8.24□□□□□ -1.09
SF3B3-206ENST00000565990 GVQW2A0A096LPI5 108 aaPredicted RBP8.23□□□□□ -1.09
SF3B3-206ENST00000565990 INAFM2P0DMQ5 153 aa8.23□□□□□ -1.09
SF3B3-206ENST00000565990 GAGE2BQ13066 116 aa8.23□□□□□ -1.09
SF3B3-206ENST00000565990 GAGE2EQ4V326 116 aa8.23□□□□□ -1.09
SF3B3-206ENST00000565990 GAGE2DQ9UEU5 116 aa8.23□□□□□ -1.09
SF3B3-206ENST00000565990 HECTD4Q9Y4D8 3996 aa8.22□□□□□ -1.09
SF3B3-206ENST00000565990 TEX49A0A1B0GTD5 131 aa8.22□□□□□ -1.09
SF3B3-206ENST00000565990 SLPIP03973 132 aa8.22□□□□□ -1.09
SF3B3-206ENST00000565990 CXCL5P42830 114 aa8.22□□□□□ -1.09
SF3B3-206ENST00000565990 KRTAP10-2P60368 255 aa8.22□□□□□ -1.09
SF3B3-206ENST00000565990 NPC2P61916 151 aa8.22□□□□□ -1.09
SF3B3-206ENST00000565990 Q8IZM0 81 aa8.22□□□□□ -1.09
SF3B3-206ENST00000565990 CLEC2BQ92478 149 aa8.22□□□□□ -1.09
SF3B3-206ENST00000565990 A0A1B0GX51 115 aa8.21□□□□□ -1.1
SF3B3-206ENST00000565990 MALP21145 153 aa8.21□□□□□ -1.1
SF3B3-206ENST00000565990 DAND5Q8N907 189 aa8.21□□□□□ -1.1
SF3B3-206ENST00000565990 TRBV7-7A0A0K0K1E9 115 aa8.2□□□□□ -1.1
SF3B3-206ENST00000565990 CNBPP62633 177 aaKnown RBP8.2□□□□□ -1.1
SF3B3-206ENST00000565990 KIAA0087Q14695 138 aa8.2□□□□□ -1.1
SF3B3-206ENST00000565990 DNAH5Q8TE73 4624 aa8.2□□□□□ -1.1
SF3B3-206ENST00000565990 F8WDY8 70 aa8.19□□□□□ -1.1
SF3B3-206ENST00000565990 COX17Q14061 63 aa8.19□□□□□ -1.1
SF3B3-206ENST00000565990 MIR7-3HGQ8N6C7 128 aa8.19□□□□□ -1.1
SF3B3-206ENST00000565990 SND1-IT1Q9HBX3 110 aa8.19□□□□□ -1.1
SF3B3-206ENST00000565990 ZNF561-AS1K7EIQ3 104 aa8.18□□□□□ -1.1
SF3B3-206ENST00000565990 HIGD2BQ4VC39 106 aa8.18□□□□□ -1.1
SF3B3-206ENST00000565990 C9orf163Q8N9P6 203 aa8.18□□□□□ -1.1
SF3B3-206ENST00000565990 C2orf48Q96LS8 159 aa8.18□□□□□ -1.1
SF3B3-206ENST00000565990 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.17□□□□□ -1.1
SF3B3-206ENST00000565990 NDUFC2O95298 119 aa8.17□□□□□ -1.1
SF3B3-206ENST00000565990 SDIM1Q6ZPB5 146 aa8.17□□□□□ -1.1
SF3B3-206ENST00000565990 ANAPC13Q9BS18 74 aa8.17□□□□□ -1.1
SF3B3-206ENST00000565990 IGLV5-52A0A0A0MRZ9 124 aa8.16□□□□□ -1.1
SF3B3-206ENST00000565990 BAALC-AS2P0C853 105 aa8.16□□□□□ -1.1
SF3B3-206ENST00000565990 FUSP35637 526 aaKnown RBP eCLIP8.16□□□□□ -1.1
SF3B3-206ENST00000565990 LINC00158P58513 81 aa8.16□□□□□ -1.1
SF3B3-206ENST00000565990 LINC00643Q86TS7 51 aa8.16□□□□□ -1.1
SF3B3-206ENST00000565990 LINC00526Q96FQ7 95 aa8.16□□□□□ -1.1
SF3B3-206ENST00000565990 DNAL4O96015 105 aa8.15□□□□□ -1.1
SF3B3-206ENST00000565990 SPAG11BQ08648 103 aa8.15□□□□□ -1.1
SF3B3-206ENST00000565990 DYNC1H1Q14204 4646 aaKnown RBP8.15□□□□□ -1.11
SF3B3-206ENST00000565990 IGKV2-28A0A075B6P5 120 aa8.14□□□□□ -1.11
SF3B3-206ENST00000565990 IGKV2D-28P01615 120 aa8.14□□□□□ -1.11
SF3B3-206ENST00000565990 NDUFV3P56181 108 aaKnown RBP8.14□□□□□ -1.11
SF3B3-206ENST00000565990 SYCNQ0VAF6 134 aa8.14□□□□□ -1.11
SF3B3-206ENST00000565990 C6orf226Q5I0X4 101 aa8.14□□□□□ -1.11
SF3B3-206ENST00000565990 LINC00337Q8N6G1 96 aa8.14□□□□□ -1.11
SF3B3-206ENST00000565990 TOMM7Q9P0U1 55 aa8.14□□□□□ -1.11
SF3B3-206ENST00000565990 PKHD1P08F94 4074 aa8.13□□□□□ -1.11
SF3B3-206ENST00000565990 CAMK2N2Q96S95 79 aa8.13□□□□□ -1.11
SF3B3-206ENST00000565990 A0A0U1RRA0 63 aa8.12□□□□□ -1.11
SF3B3-206ENST00000565990 C10orf25Q5T742 122 aa8.12□□□□□ -1.11
SF3B3-206ENST00000565990 UNQ6190/PRO20217Q6UXQ8 127 aa8.12□□□□□ -1.11
SF3B3-206ENST00000565990 Q6ZRU5 148 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms