RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 PHF5AQ7RTV0 110 aaKnown RBP9.39□□□□□ -0.91
CX3CL1-204ENST00000565912 FAM229AH3BQW9 127 aa9.39□□□□□ -0.91
CX3CL1-204ENST00000565912 TP53AIP1Q9HCN2 124 aa9.37□□□□□ -0.91
CX3CL1-204ENST00000565912 ACYP2P14621 99 aa9.37□□□□□ -0.91
CX3CL1-204ENST00000565912 LINC00315P59091 139 aa9.37□□□□□ -0.91
CX3CL1-204ENST00000565912 CHTF8P0CG12 524 aa9.36□□□□□ -0.91
CX3CL1-204ENST00000565912 CEP295Q9C0D2 2601 aa9.36□□□□□ -0.91
CX3CL1-204ENST00000565912 FN1P02751 2386 aaKnown RBP9.36□□□□□ -0.91
CX3CL1-204ENST00000565912 LRRK2Q5S007 2527 aa9.36□□□□□ -0.91
CX3CL1-204ENST00000565912 RTL8CO15255 209 aa9.36□□□□□ -0.91
CX3CL1-204ENST00000565912 TET2Q6N021 2002 aaPredicted RBP9.35□□□□□ -0.91
CX3CL1-204ENST00000565912 PLA2G1BP04054 148 aaKnown RBP9.35□□□□□ -0.91
CX3CL1-204ENST00000565912 ANKRD11Q6UB99 2663 aaPredicted RBP9.34□□□□□ -0.91
CX3CL1-204ENST00000565912 TYMSOSQ8TAI1 123 aa9.34□□□□□ -0.91
CX3CL1-204ENST00000565912 UTRNP46939 3433 aa9.33□□□□□ -0.92
CX3CL1-204ENST00000565912 TLN2Q9Y4G6 2542 aa9.33□□□□□ -0.92
CX3CL1-204ENST00000565912 C16orf90A8MZG2 172 aa9.33□□□□□ -0.92
CX3CL1-204ENST00000565912 LINC00313P59037 77 aa9.32□□□□□ -0.92
CX3CL1-204ENST00000565912 ELOF1P60002 83 aaKnown RBP9.32□□□□□ -0.92
CX3CL1-204ENST00000565912 LINC00476Q8WZB0 136 aa9.32□□□□□ -0.92
CX3CL1-204ENST00000565912 EPM2AB3EWF7 344 aa9.32□□□□□ -0.92
CX3CL1-204ENST00000565912 SPAG11AQ6PDA7 123 aa9.32□□□□□ -0.92
CX3CL1-204ENST00000565912 KRTAP24-1Q3LI83 254 aa9.32□□□□□ -0.92
CX3CL1-204ENST00000565912 FAM19A4Q96LR4 140 aa9.31□□□□□ -0.92
CX3CL1-204ENST00000565912 CDIP1Q9H305 208 aa9.31□□□□□ -0.92
CX3CL1-204ENST00000565912 Q6ZRP5 223 aa9.31□□□□□ -0.92
CX3CL1-204ENST00000565912 NBDYA0A0U1RRE5 68 aa9.31□□□□□ -0.92
CX3CL1-204ENST00000565912 Q8NBF4 154 aa9.31□□□□□ -0.92
CX3CL1-204ENST00000565912 H3BNG1 76 aa9.31□□□□□ -0.92
CX3CL1-204ENST00000565912 FAM218AQ96MZ4 157 aa9.31□□□□□ -0.92
CX3CL1-204ENST00000565912 ST20-AS1Q8NBB2 130 aa9.3□□□□□ -0.92
CX3CL1-204ENST00000565912 LINC01546A6NGU7 62 aa9.3□□□□□ -0.92
CX3CL1-204ENST00000565912 Q6ZRX8 168 aa9.3□□□□□ -0.92
CX3CL1-204ENST00000565912 IGLV8-61A0A075B6I0 122 aa9.28□□□□□ -0.92
CX3CL1-204ENST00000565912 USP9XQ93008 2570 aaPredicted RBP9.28□□□□□ -0.92
CX3CL1-204ENST00000565912 RPL37AP61513 92 aaKnown RBP9.28□□□□□ -0.92
CX3CL1-204ENST00000565912 LINC00588Q9Y4M8 146 aa9.27□□□□□ -0.92
CX3CL1-204ENST00000565912 Q96NJ1 140 aa9.27□□□□□ -0.93
CX3CL1-204ENST00000565912 IGLV5-45A0A087WSX0 123 aa9.27□□□□□ -0.93
CX3CL1-204ENST00000565912 Q6ZQT0 140 aa9.25□□□□□ -0.93
CX3CL1-204ENST00000565912 SETD2Q9BYW2 2564 aaPredicted RBP9.25□□□□□ -0.93
CX3CL1-204ENST00000565912 SPTBN4Q9H254 2564 aa9.25□□□□□ -0.93
CX3CL1-204ENST00000565912 A0A1B0GW54 56 aa9.24□□□□□ -0.93
CX3CL1-204ENST00000565912 ATP11AUNQ6ZP68 121 aa9.24□□□□□ -0.93
CX3CL1-204ENST00000565912 DNAH12Q6ZR08 3092 aa9.24□□□□□ -0.93
CX3CL1-204ENST00000565912 TRAV22A0A0B4J277 110 aa9.23□□□□□ -0.93
CX3CL1-204ENST00000565912 SMCPP49901 116 aaPredicted RBP9.23□□□□□ -0.93
CX3CL1-204ENST00000565912 CHD8Q9HCK8 2581 aa9.23□□□□□ -0.93
CX3CL1-204ENST00000565912 J3QL48 77 aa9.23□□□□□ -0.93
CX3CL1-204ENST00000565912 Q8NAQ8 132 aa9.22□□□□□ -0.93
CX3CL1-204ENST00000565912 BCE1O60756 84 aa9.22□□□□□ -0.93
CX3CL1-204ENST00000565912 LOC110117498A0A087WWA1 95 aa9.2□□□□□ -0.94
CX3CL1-204ENST00000565912 H3BPC8 53 aa9.2□□□□□ -0.94
CX3CL1-204ENST00000565912 ZNF462Q96JM2 2506 aa9.2□□□□□ -0.94
CX3CL1-204ENST00000565912 GVQW2A0A096LPI5 108 aaPredicted RBP9.2□□□□□ -0.94
CX3CL1-204ENST00000565912 WWC2-AS2Q96NR7 200 aa9.19□□□□□ -0.94
CX3CL1-204ENST00000565912 PKD1L2Q7Z442 2459 aa9.18□□□□□ -0.94
CX3CL1-204ENST00000565912 PRO0628Q9UI54 55 aa9.18□□□□□ -0.94
CX3CL1-204ENST00000565912 FAM168BA1KXE4 195 aa9.18□□□□□ -0.94
CX3CL1-204ENST00000565912 TM2D3Q9BRN9 247 aa9.18□□□□□ -0.94
CX3CL1-204ENST00000565912 PTPRBP23467 1997 aa9.18□□□□□ -0.94
CX3CL1-204ENST00000565912 PCSK5Q92824 1860 aa9.17□□□□□ -0.94
CX3CL1-204ENST00000565912 SERTAD4-AS1Q5TG53 156 aa9.16□□□□□ -0.94
CX3CL1-204ENST00000565912 F8P00451 2351 aa9.16□□□□□ -0.94
CX3CL1-204ENST00000565912 C4orf26Q17RF5 130 aa9.15□□□□□ -0.94
CX3CL1-204ENST00000565912 COX6B2Q6YFQ2 88 aa9.15□□□□□ -0.94
CX3CL1-204ENST00000565912 SPINT4Q6UDR6 99 aa9.14□□□□□ -0.95
CX3CL1-204ENST00000565912 TRBV7-4A0A0J9YYF1 115 aa9.14□□□□□ -0.95
CX3CL1-204ENST00000565912 LOC101927531A0A1B0GV80 90 aa9.13□□□□□ -0.95
CX3CL1-204ENST00000565912 PRO0461Q9UI25 63 aa9.13□□□□□ -0.95
CX3CL1-204ENST00000565912 USP9YO00507 2555 aaPredicted RBP9.13□□□□□ -0.95
CX3CL1-204ENST00000565912 DNAH10OSP0CZ25 163 aa9.12□□□□□ -0.95
CX3CL1-204ENST00000565912 VPREB1P12018 145 aa9.12□□□□□ -0.95
CX3CL1-204ENST00000565912 A8MWP4 228 aa9.12□□□□□ -0.95
CX3CL1-204ENST00000565912 C8orf87E5RJ46 101 aa9.12□□□□□ -0.95
CX3CL1-204ENST00000565912 MRPL34Q9BQ48 92 aaKnown RBP9.11□□□□□ -0.95
CX3CL1-204ENST00000565912 K7EQZ3 153 aa9.1□□□□□ -0.95
CX3CL1-204ENST00000565912 COL27A1Q8IZC6 1860 aaPredicted RBP9.09□□□□□ -0.95
CX3CL1-204ENST00000565912 LINC01600Q96MT4 127 aa9.09□□□□□ -0.95
CX3CL1-204ENST00000565912 IGLV6-57P01721 117 aa9.09□□□□□ -0.95
CX3CL1-204ENST00000565912 SSBP3-AS1Q7Z2R9 100 aa9.08□□□□□ -0.96
CX3CL1-204ENST00000565912 IGLV1-50A0A075B6I6 118 aa9.07□□□□□ -0.96
CX3CL1-204ENST00000565912 DSCR10P59022 87 aa9.07□□□□□ -0.96
CX3CL1-204ENST00000565912 APLNQ9ULZ1 77 aa9.05□□□□□ -0.96
CX3CL1-204ENST00000565912 LITAFQ99732 161 aa9.05□□□□□ -0.96
CX3CL1-204ENST00000565912 C9orf92A6NGG3 77 aa9.05□□□□□ -0.96
CX3CL1-204ENST00000565912 RPS28P62857 69 aaKnown RBP9.04□□□□□ -0.96
CX3CL1-204ENST00000565912 COA5Q86WW8 74 aa9.04□□□□□ -0.96
CX3CL1-204ENST00000565912 CEP350Q5VT06 3117 aa9.04□□□□□ -0.96
CX3CL1-204ENST00000565912 MTORP42345 2549 aa9.04□□□□□ -0.96
CX3CL1-204ENST00000565912 LINC00304Q8N9R0 145 aa9.03□□□□□ -0.96
CX3CL1-204ENST00000565912 OBSCN-AS1Q96MR7 158 aa9.02□□□□□ -0.97
CX3CL1-204ENST00000565912 KCNQ1DNQ9H478 68 aa9.02□□□□□ -0.97
CX3CL1-204ENST00000565912 IGFL1Q6UW32 110 aa9.02□□□□□ -0.97
CX3CL1-204ENST00000565912 KRTAP10-11P60412 298 aa9.01□□□□□ -0.97
CX3CL1-204ENST00000565912 K7EIL1 84 aa9.01□□□□□ -0.97
CX3CL1-204ENST00000565912 SMR3BP02814 79 aaPredicted RBP9.01□□□□□ -0.97
CX3CL1-204ENST00000565912 POLQO75417 2590 aa9□□□□□ -0.97
CX3CL1-204ENST00000565912 C8orf17Q9NRJ1 99 aa9□□□□□ -0.97
CX3CL1-204ENST00000565912 A8MUN3 132 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms